data_4MZY # _model_server_result.job_id GrNlrNWry535Pu_jvnCrpQ _model_server_result.datetime_utc '2025-03-06 09:52:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mzy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4MZY # _exptl.entry_id 4MZY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MZY _cell.length_a 71.254 _cell.length_b 111.381 _cell.length_c 154.604 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MZY _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 71.254 111.381 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 287 n n P O2 PO4 sing 288 n n P O3 PO4 sing 289 n n P O4 PO4 sing 290 n n # _atom_sites.entry_id 4MZY _atom_sites.fract_transf_matrix[1][1] 0.014034 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 501 1 PO4 PO4 . C 2 PO4 A 1 502 2 PO4 PO4 . D 3 GOL A 1 503 1 GOL GOL . E 3 GOL A 1 504 2 GOL GOL . F 3 GOL A 1 505 4 GOL GOL . G 3 GOL A 1 506 5 GOL GOL . H 3 GOL A 1 507 6 GOL GOL . I 3 GOL A 1 508 7 GOL GOL . J 3 GOL A 1 509 8 GOL GOL . K 3 GOL A 1 510 9 GOL GOL . L 3 GOL A 1 511 10 GOL GOL . M 3 GOL A 1 512 11 GOL GOL . N 3 GOL A 1 513 12 GOL GOL . O 3 GOL A 1 514 13 GOL GOL . P 4 MLA A 1 515 2 MLA MLA . Q 4 MLA A 1 516 3 MLA MLA . R 4 MLA A 1 517 4 MLA MLA . S 5 CL A 1 518 1 CL CL . T 5 CL A 1 519 1 CL CL . U 6 FMT A 1 520 1 FMT FMT . V 5 CL A 1 521 1 CL CL . W 5 CL A 1 522 1 CL CL . X 7 HOH A 1 601 1 HOH HOH . X 7 HOH A 2 602 2 HOH HOH . X 7 HOH A 3 603 3 HOH HOH . X 7 HOH A 4 604 4 HOH HOH . X 7 HOH A 5 605 5 HOH HOH . X 7 HOH A 6 606 6 HOH HOH . X 7 HOH A 7 607 7 HOH HOH . X 7 HOH A 8 608 8 HOH HOH . X 7 HOH A 9 609 9 HOH HOH . X 7 HOH A 10 610 10 HOH HOH . X 7 HOH A 11 611 12 HOH HOH . X 7 HOH A 12 612 13 HOH HOH . X 7 HOH A 13 613 14 HOH HOH . X 7 HOH A 14 614 15 HOH HOH . X 7 HOH A 15 615 16 HOH HOH . X 7 HOH A 16 616 18 HOH HOH . X 7 HOH A 17 617 19 HOH HOH . X 7 HOH A 18 618 20 HOH HOH . X 7 HOH A 19 619 22 HOH HOH . X 7 HOH A 20 620 23 HOH HOH . X 7 HOH A 21 621 24 HOH HOH . X 7 HOH A 22 622 25 HOH HOH . X 7 HOH A 23 623 26 HOH HOH . X 7 HOH A 24 624 27 HOH HOH . X 7 HOH A 25 625 28 HOH HOH . X 7 HOH A 26 626 29 HOH HOH . X 7 HOH A 27 627 30 HOH HOH . X 7 HOH A 28 628 32 HOH HOH . X 7 HOH A 29 629 33 HOH HOH . X 7 HOH A 30 630 34 HOH HOH . X 7 HOH A 31 631 36 HOH HOH . X 7 HOH A 32 632 38 HOH HOH . X 7 HOH A 33 633 39 HOH HOH . X 7 HOH A 34 634 40 HOH HOH . X 7 HOH A 35 635 41 HOH HOH . X 7 HOH A 36 636 42 HOH HOH . X 7 HOH A 37 637 43 HOH HOH . X 7 HOH A 38 638 44 HOH HOH . X 7 HOH A 39 639 45 HOH HOH . X 7 HOH A 40 640 46 HOH HOH . X 7 HOH A 41 641 49 HOH HOH . X 7 HOH A 42 642 50 HOH HOH . X 7 HOH A 43 643 51 HOH HOH . X 7 HOH A 44 644 52 HOH HOH . X 7 HOH A 45 645 54 HOH HOH . X 7 HOH A 46 646 56 HOH HOH . X 7 HOH A 47 647 57 HOH HOH . X 7 HOH A 48 648 59 HOH HOH . X 7 HOH A 49 649 60 HOH HOH . X 7 HOH A 50 650 63 HOH HOH . X 7 HOH A 51 651 64 HOH HOH . X 7 HOH A 52 652 65 HOH HOH . X 7 HOH A 53 653 66 HOH HOH . X 7 HOH A 54 654 67 HOH HOH . X 7 HOH A 55 655 69 HOH HOH . X 7 HOH A 56 656 70 HOH HOH . X 7 HOH A 57 657 71 HOH HOH . X 7 HOH A 58 658 72 HOH HOH . X 7 HOH A 59 659 73 HOH HOH . X 7 HOH A 60 660 74 HOH HOH . X 7 HOH A 61 661 75 HOH HOH . X 7 HOH A 62 662 76 HOH HOH . X 7 HOH A 63 663 78 HOH HOH . X 7 HOH A 64 664 80 HOH HOH . X 7 HOH A 65 665 81 HOH HOH . X 7 HOH A 66 666 82 HOH HOH . X 7 HOH A 67 667 83 HOH HOH . X 7 HOH A 68 668 84 HOH HOH . X 7 HOH A 69 669 85 HOH HOH . X 7 HOH A 70 670 86 HOH HOH . X 7 HOH A 71 671 89 HOH HOH . X 7 HOH A 72 672 90 HOH HOH . X 7 HOH A 73 673 91 HOH HOH . X 7 HOH A 74 674 92 HOH HOH . X 7 HOH A 75 675 93 HOH HOH . X 7 HOH A 76 676 94 HOH HOH . X 7 HOH A 77 677 95 HOH HOH . X 7 HOH A 78 678 98 HOH HOH . X 7 HOH A 79 679 100 HOH HOH . X 7 HOH A 80 680 102 HOH HOH . X 7 HOH A 81 681 104 HOH HOH . X 7 HOH A 82 682 105 HOH HOH . X 7 HOH A 83 683 106 HOH HOH . X 7 HOH A 84 684 107 HOH HOH . X 7 HOH A 85 685 108 HOH HOH . X 7 HOH A 86 686 109 HOH HOH . X 7 HOH A 87 687 115 HOH HOH . X 7 HOH A 88 688 116 HOH HOH . X 7 HOH A 89 689 118 HOH HOH . X 7 HOH A 90 690 120 HOH HOH . X 7 HOH A 91 691 121 HOH HOH . X 7 HOH A 92 692 123 HOH HOH . X 7 HOH A 93 693 124 HOH HOH . X 7 HOH A 94 694 125 HOH HOH . X 7 HOH A 95 695 126 HOH HOH . X 7 HOH A 96 696 127 HOH HOH . X 7 HOH A 97 697 128 HOH HOH . X 7 HOH A 98 698 129 HOH HOH . X 7 HOH A 99 699 130 HOH HOH . X 7 HOH A 100 700 131 HOH HOH . X 7 HOH A 101 701 132 HOH HOH . X 7 HOH A 102 702 134 HOH HOH . X 7 HOH A 103 703 135 HOH HOH . X 7 HOH A 104 704 136 HOH HOH . X 7 HOH A 105 705 137 HOH HOH . X 7 HOH A 106 706 138 HOH HOH . X 7 HOH A 107 707 139 HOH HOH . X 7 HOH A 108 708 141 HOH HOH . X 7 HOH A 109 709 142 HOH HOH . X 7 HOH A 110 710 143 HOH HOH . X 7 HOH A 111 711 144 HOH HOH . X 7 HOH A 112 712 145 HOH HOH . X 7 HOH A 113 713 146 HOH HOH . X 7 HOH A 114 714 147 HOH HOH . X 7 HOH A 115 715 152 HOH HOH . X 7 HOH A 116 716 153 HOH HOH . X 7 HOH A 117 717 154 HOH HOH . X 7 HOH A 118 718 155 HOH HOH . X 7 HOH A 119 719 156 HOH HOH . X 7 HOH A 120 720 158 HOH HOH . X 7 HOH A 121 721 159 HOH HOH . X 7 HOH A 122 722 160 HOH HOH . X 7 HOH A 123 723 161 HOH HOH . X 7 HOH A 124 724 163 HOH HOH . X 7 HOH A 125 725 164 HOH HOH . X 7 HOH A 126 726 165 HOH HOH . X 7 HOH A 127 727 166 HOH HOH . X 7 HOH A 128 728 167 HOH HOH . X 7 HOH A 129 729 168 HOH HOH . X 7 HOH A 130 730 176 HOH HOH . X 7 HOH A 131 731 177 HOH HOH . X 7 HOH A 132 732 179 HOH HOH . X 7 HOH A 133 733 180 HOH HOH . X 7 HOH A 134 734 181 HOH HOH . X 7 HOH A 135 735 182 HOH HOH . X 7 HOH A 136 736 183 HOH HOH . X 7 HOH A 137 737 184 HOH HOH . X 7 HOH A 138 738 185 HOH HOH . X 7 HOH A 139 739 186 HOH HOH . X 7 HOH A 140 740 187 HOH HOH . X 7 HOH A 141 741 188 HOH HOH . X 7 HOH A 142 742 189 HOH HOH . X 7 HOH A 143 743 190 HOH HOH . X 7 HOH A 144 744 195 HOH HOH . X 7 HOH A 145 745 196 HOH HOH . X 7 HOH A 146 746 197 HOH HOH . X 7 HOH A 147 747 198 HOH HOH . X 7 HOH A 148 748 199 HOH HOH . X 7 HOH A 149 749 200 HOH HOH . X 7 HOH A 150 750 201 HOH HOH . X 7 HOH A 151 751 202 HOH HOH . X 7 HOH A 152 752 203 HOH HOH . X 7 HOH A 153 753 206 HOH HOH . X 7 HOH A 154 754 207 HOH HOH . X 7 HOH A 155 755 208 HOH HOH . X 7 HOH A 156 756 209 HOH HOH . X 7 HOH A 157 757 210 HOH HOH . X 7 HOH A 158 758 212 HOH HOH . X 7 HOH A 159 759 213 HOH HOH . X 7 HOH A 160 760 214 HOH HOH . X 7 HOH A 161 761 215 HOH HOH . X 7 HOH A 162 762 216 HOH HOH . X 7 HOH A 163 763 217 HOH HOH . X 7 HOH A 164 764 218 HOH HOH . X 7 HOH A 165 765 220 HOH HOH . X 7 HOH A 166 766 221 HOH HOH . X 7 HOH A 167 767 223 HOH HOH . X 7 HOH A 168 768 224 HOH HOH . X 7 HOH A 169 769 226 HOH HOH . X 7 HOH A 170 770 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 14.785 77.606 44.157 1 52.7 ? P PO4 501 A 1 HETATM 2 O O1 PO4 . . . B 2 16.296 77.494 44.155 1 46.77 ? O1 PO4 501 A 1 HETATM 3 O O2 PO4 . . . B 2 14.403 78.859 43.393 1 62.76 ? O2 PO4 501 A 1 HETATM 4 O O3 PO4 . . . B 2 14.201 76.38 43.49 1 93.16 ? O3 PO4 501 A 1 HETATM 5 O O4 PO4 . . . B 2 14.189 77.716 45.527 1 44.52 ? O4 PO4 501 A 1 # _model_server_stats.io_time_ms 349 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 473 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #