data_4N0B
#
_model_server_result.job_id            IEbAAvSGXg0VkPq1GCFETw 
_model_server_result.datetime_utc      '2024-11-23 04:24:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4n0b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":501}' 
#
_entry.id    4N0B 
#
_exptl.entry_id    4N0B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4N0B 
_cell.length_a            97.248 
_cell.length_b            101.33 
_cell.length_c            211.215 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4N0B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,L,M 1 1 
C,D,I,J,K,N,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 311 A SER 311 1_555 A N LLP 312 A LLP 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C LLP 312 A LLP 312 1_555 A N SER 313 A SER 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 B C SER 311 B SER 311 1_555 B N LLP 312 B LLP 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 B C LLP 312 B LLP 312 1_555 B N SER 313 B SER 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 C C SER 311 C SER 311 1_555 C N LLP 312 C LLP 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 C C LLP 312 C LLP 312 1_555 C N SER 313 C SER 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale7 D C SER 311 D SER 311 1_555 D N LLP 312 D LLP 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale8 D C LLP 312 D LLP 312 1_555 D N SER 313 D SER 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 F ZN ZN . A ZN 502 1_555 L O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? 
metalc ? metalc2 H ZN ZN . B ZN 502 1_555 M O HOH . B HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? 
metalc ? metalc3 D O GLU 270 D GLU 270 1_555 J CA CA . D CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4N0B 
_atom_sites.fract_transf_matrix[1][1]    0.010283 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009869 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004735 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ACE A 1 501 1 ACE ACE . 
F 3 ZN A 1 502 1 ZN ZN . 
G 2 ACE B 1 501 1 ACE ACE . 
H 3 ZN B 1 502 2 ZN ZN . 
I 3 ZN C 1 501 3 ZN ZN . 
J 4 CA D 1 501 1 CA CA . 
K 3 ZN D 1 502 4 ZN ZN . 
L 5 HOH A 1 601 1 HOH HOH . 
L 5 HOH A 2 602 2 HOH HOH . 
L 5 HOH A 3 603 3 HOH HOH . 
L 5 HOH A 4 604 7 HOH HOH . 
L 5 HOH A 5 605 9 HOH HOH . 
L 5 HOH A 6 606 10 HOH HOH . 
L 5 HOH A 7 607 12 HOH HOH . 
L 5 HOH A 8 608 16 HOH HOH . 
L 5 HOH A 9 609 17 HOH HOH . 
L 5 HOH A 10 610 20 HOH HOH . 
L 5 HOH A 11 611 23 HOH HOH . 
L 5 HOH A 12 612 26 HOH HOH . 
L 5 HOH A 13 613 28 HOH HOH . 
L 5 HOH A 14 614 30 HOH HOH . 
L 5 HOH A 15 615 31 HOH HOH . 
L 5 HOH A 16 616 52 HOH HOH . 
L 5 HOH A 17 617 53 HOH HOH . 
M 5 HOH B 1 601 4 HOH HOH . 
M 5 HOH B 2 602 5 HOH HOH . 
M 5 HOH B 3 603 6 HOH HOH . 
M 5 HOH B 4 604 8 HOH HOH . 
M 5 HOH B 5 605 13 HOH HOH . 
M 5 HOH B 6 606 14 HOH HOH . 
M 5 HOH B 7 607 18 HOH HOH . 
M 5 HOH B 8 608 19 HOH HOH . 
M 5 HOH B 9 609 21 HOH HOH . 
M 5 HOH B 10 610 24 HOH HOH . 
M 5 HOH B 11 611 25 HOH HOH . 
M 5 HOH B 12 612 27 HOH HOH . 
M 5 HOH B 13 613 34 HOH HOH . 
M 5 HOH B 14 614 37 HOH HOH . 
M 5 HOH B 15 615 38 HOH HOH . 
M 5 HOH B 16 616 40 HOH HOH . 
M 5 HOH B 17 617 41 HOH HOH . 
M 5 HOH B 18 618 42 HOH HOH . 
M 5 HOH B 19 619 43 HOH HOH . 
M 5 HOH B 20 620 50 HOH HOH . 
M 5 HOH B 21 621 51 HOH HOH . 
N 5 HOH C 1 601 15 HOH HOH . 
N 5 HOH C 2 602 22 HOH HOH . 
N 5 HOH C 3 603 29 HOH HOH . 
N 5 HOH C 4 604 33 HOH HOH . 
N 5 HOH C 5 605 35 HOH HOH . 
N 5 HOH C 6 606 39 HOH HOH . 
N 5 HOH C 7 607 44 HOH HOH . 
N 5 HOH C 8 608 48 HOH HOH . 
N 5 HOH C 9 609 49 HOH HOH . 
N 5 HOH C 10 610 54 HOH HOH . 
O 5 HOH D 1 601 11 HOH HOH . 
O 5 HOH D 2 602 32 HOH HOH . 
O 5 HOH D 3 603 36 HOH HOH . 
O 5 HOH D 4 604 45 HOH HOH . 
O 5 HOH D 5 605 46 HOH HOH . 
O 5 HOH D 6 606 47 HOH HOH . 
O 5 HOH D 7 607 55 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               56.776 
_atom_site.Cartn_y               27.568 
_atom_site.Cartn_z               -2.483 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        102.18 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#