data_4N2D # _model_server_result.job_id mZs5gYHTITWfGQONunv62Q _model_server_result.datetime_utc '2024-10-16 20:58:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n2d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":704}' # _entry.id 4N2D # _exptl.entry_id 4N2D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.66 _cell.angle_gamma 90 _cell.entry_id 4N2D _cell.length_a 202.19 _cell.length_b 51.82 _cell.length_c 75.895 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N2D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 404.38 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 144 A ASN 123 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc2 A OD1 ASP 146 A ASP 125 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc3 A OD1 ASP 148 A ASP 127 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 A O VAL 150 A VAL 129 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc5 A OE1 GLU 152 A GLU 131 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc6 A OE2 GLU 375 A GLU 354 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc7 A O PHE 429 A PHE 408 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc8 A O LEU 432 A LEU 411 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc9 E CA CA . A CA 704 1_555 G O HOH . A HOH 1029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc10 F CA CA . A CA 705 1_555 G O HOH . A HOH 984 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4N2D _atom_sites.fract_transf_matrix[1][1] 0.004946 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001386 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019298 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD A 1 701 2 MPD MPD . C 2 MPD A 1 702 3 MPD MPD . D 2 MPD A 1 703 1 MPD MPD . E 3 CA A 1 704 1 CA CA . F 3 CA A 1 705 1 CA CA . G 4 HOH A 1 801 3 HOH HOH . G 4 HOH A 2 802 4 HOH HOH . G 4 HOH A 3 803 5 HOH HOH . G 4 HOH A 4 804 6 HOH HOH . G 4 HOH A 5 805 7 HOH HOH . G 4 HOH A 6 806 8 HOH HOH . G 4 HOH A 7 807 9 HOH HOH . G 4 HOH A 8 808 10 HOH HOH . G 4 HOH A 9 809 11 HOH HOH . G 4 HOH A 10 810 12 HOH HOH . G 4 HOH A 11 811 13 HOH HOH . G 4 HOH A 12 812 14 HOH HOH . G 4 HOH A 13 813 15 HOH HOH . G 4 HOH A 14 814 16 HOH HOH . G 4 HOH A 15 815 17 HOH HOH . G 4 HOH A 16 816 18 HOH HOH . G 4 HOH A 17 817 19 HOH HOH . G 4 HOH A 18 818 20 HOH HOH . G 4 HOH A 19 819 21 HOH HOH . G 4 HOH A 20 820 22 HOH HOH . G 4 HOH A 21 821 23 HOH HOH . G 4 HOH A 22 822 24 HOH HOH . G 4 HOH A 23 823 25 HOH HOH . G 4 HOH A 24 824 26 HOH HOH . G 4 HOH A 25 825 27 HOH HOH . G 4 HOH A 26 826 28 HOH HOH . G 4 HOH A 27 827 29 HOH HOH . G 4 HOH A 28 828 30 HOH HOH . G 4 HOH A 29 829 31 HOH HOH . G 4 HOH A 30 830 32 HOH HOH . G 4 HOH A 31 831 33 HOH HOH . G 4 HOH A 32 832 34 HOH HOH . G 4 HOH A 33 833 35 HOH HOH . G 4 HOH A 34 834 36 HOH HOH . G 4 HOH A 35 835 37 HOH HOH . G 4 HOH A 36 836 38 HOH HOH . G 4 HOH A 37 837 39 HOH HOH . G 4 HOH A 38 838 40 HOH HOH . G 4 HOH A 39 839 41 HOH HOH . G 4 HOH A 40 840 42 HOH HOH . G 4 HOH A 41 841 43 HOH HOH . G 4 HOH A 42 842 44 HOH HOH . G 4 HOH A 43 843 45 HOH HOH . G 4 HOH A 44 844 46 HOH HOH . G 4 HOH A 45 845 47 HOH HOH . G 4 HOH A 46 846 48 HOH HOH . G 4 HOH A 47 847 49 HOH HOH . G 4 HOH A 48 848 50 HOH HOH . G 4 HOH A 49 849 51 HOH HOH . G 4 HOH A 50 850 52 HOH HOH . G 4 HOH A 51 851 53 HOH HOH . G 4 HOH A 52 852 54 HOH HOH . G 4 HOH A 53 853 55 HOH HOH . G 4 HOH A 54 854 56 HOH HOH . G 4 HOH A 55 855 57 HOH HOH . G 4 HOH A 56 856 58 HOH HOH . G 4 HOH A 57 857 59 HOH HOH . G 4 HOH A 58 858 60 HOH HOH . G 4 HOH A 59 859 61 HOH HOH . G 4 HOH A 60 860 62 HOH HOH . G 4 HOH A 61 861 63 HOH HOH . G 4 HOH A 62 862 64 HOH HOH . G 4 HOH A 63 863 65 HOH HOH . G 4 HOH A 64 864 66 HOH HOH . G 4 HOH A 65 865 67 HOH HOH . G 4 HOH A 66 866 68 HOH HOH . G 4 HOH A 67 867 69 HOH HOH . G 4 HOH A 68 868 70 HOH HOH . G 4 HOH A 69 869 71 HOH HOH . G 4 HOH A 70 870 72 HOH HOH . G 4 HOH A 71 871 73 HOH HOH . G 4 HOH A 72 872 74 HOH HOH . G 4 HOH A 73 873 75 HOH HOH . G 4 HOH A 74 874 76 HOH HOH . G 4 HOH A 75 875 77 HOH HOH . G 4 HOH A 76 876 78 HOH HOH . G 4 HOH A 77 877 79 HOH HOH . G 4 HOH A 78 878 80 HOH HOH . G 4 HOH A 79 879 81 HOH HOH . G 4 HOH A 80 880 82 HOH HOH . G 4 HOH A 81 881 83 HOH HOH . G 4 HOH A 82 882 84 HOH HOH . G 4 HOH A 83 883 85 HOH HOH . G 4 HOH A 84 884 86 HOH HOH . G 4 HOH A 85 885 87 HOH HOH . G 4 HOH A 86 886 88 HOH HOH . G 4 HOH A 87 887 89 HOH HOH . G 4 HOH A 88 888 90 HOH HOH . G 4 HOH A 89 889 91 HOH HOH . G 4 HOH A 90 890 92 HOH HOH . G 4 HOH A 91 891 93 HOH HOH . G 4 HOH A 92 892 94 HOH HOH . G 4 HOH A 93 893 95 HOH HOH . G 4 HOH A 94 894 96 HOH HOH . G 4 HOH A 95 895 97 HOH HOH . G 4 HOH A 96 896 98 HOH HOH . G 4 HOH A 97 897 99 HOH HOH . G 4 HOH A 98 898 100 HOH HOH . G 4 HOH A 99 899 101 HOH HOH . G 4 HOH A 100 900 103 HOH HOH . G 4 HOH A 101 901 104 HOH HOH . G 4 HOH A 102 902 105 HOH HOH . G 4 HOH A 103 903 106 HOH HOH . G 4 HOH A 104 904 107 HOH HOH . G 4 HOH A 105 905 108 HOH HOH . G 4 HOH A 106 906 109 HOH HOH . G 4 HOH A 107 907 110 HOH HOH . G 4 HOH A 108 908 111 HOH HOH . G 4 HOH A 109 909 112 HOH HOH . G 4 HOH A 110 910 113 HOH HOH . G 4 HOH A 111 911 114 HOH HOH . G 4 HOH A 112 912 115 HOH HOH . G 4 HOH A 113 913 116 HOH HOH . G 4 HOH A 114 914 117 HOH HOH . G 4 HOH A 115 915 118 HOH HOH . G 4 HOH A 116 916 119 HOH HOH . G 4 HOH A 117 917 120 HOH HOH . G 4 HOH A 118 918 121 HOH HOH . G 4 HOH A 119 919 122 HOH HOH . G 4 HOH A 120 920 123 HOH HOH . G 4 HOH A 121 921 124 HOH HOH . G 4 HOH A 122 922 125 HOH HOH . G 4 HOH A 123 923 126 HOH HOH . G 4 HOH A 124 924 127 HOH HOH . G 4 HOH A 125 925 128 HOH HOH . G 4 HOH A 126 926 129 HOH HOH . G 4 HOH A 127 927 130 HOH HOH . G 4 HOH A 128 928 131 HOH HOH . G 4 HOH A 129 929 132 HOH HOH . G 4 HOH A 130 930 133 HOH HOH . G 4 HOH A 131 931 134 HOH HOH . G 4 HOH A 132 932 136 HOH HOH . G 4 HOH A 133 933 137 HOH HOH . G 4 HOH A 134 934 138 HOH HOH . G 4 HOH A 135 935 139 HOH HOH . G 4 HOH A 136 936 140 HOH HOH . G 4 HOH A 137 937 141 HOH HOH . G 4 HOH A 138 938 142 HOH HOH . G 4 HOH A 139 939 143 HOH HOH . G 4 HOH A 140 940 144 HOH HOH . G 4 HOH A 141 941 145 HOH HOH . G 4 HOH A 142 942 146 HOH HOH . G 4 HOH A 143 943 147 HOH HOH . G 4 HOH A 144 944 148 HOH HOH . G 4 HOH A 145 945 149 HOH HOH . G 4 HOH A 146 946 150 HOH HOH . G 4 HOH A 147 947 151 HOH HOH . G 4 HOH A 148 948 152 HOH HOH . G 4 HOH A 149 949 153 HOH HOH . G 4 HOH A 150 950 154 HOH HOH . G 4 HOH A 151 951 155 HOH HOH . G 4 HOH A 152 952 156 HOH HOH . G 4 HOH A 153 953 157 HOH HOH . G 4 HOH A 154 954 159 HOH HOH . G 4 HOH A 155 955 160 HOH HOH . G 4 HOH A 156 956 161 HOH HOH . G 4 HOH A 157 957 162 HOH HOH . G 4 HOH A 158 958 163 HOH HOH . G 4 HOH A 159 959 164 HOH HOH . G 4 HOH A 160 960 165 HOH HOH . G 4 HOH A 161 961 167 HOH HOH . G 4 HOH A 162 962 168 HOH HOH . G 4 HOH A 163 963 169 HOH HOH . G 4 HOH A 164 964 170 HOH HOH . G 4 HOH A 165 965 171 HOH HOH . G 4 HOH A 166 966 172 HOH HOH . G 4 HOH A 167 967 173 HOH HOH . G 4 HOH A 168 968 174 HOH HOH . G 4 HOH A 169 969 175 HOH HOH . G 4 HOH A 170 970 176 HOH HOH . G 4 HOH A 171 971 177 HOH HOH . G 4 HOH A 172 972 178 HOH HOH . G 4 HOH A 173 973 180 HOH HOH . G 4 HOH A 174 974 182 HOH HOH . G 4 HOH A 175 975 183 HOH HOH . G 4 HOH A 176 976 184 HOH HOH . G 4 HOH A 177 977 186 HOH HOH . G 4 HOH A 178 978 187 HOH HOH . G 4 HOH A 179 979 188 HOH HOH . G 4 HOH A 180 980 189 HOH HOH . G 4 HOH A 181 981 190 HOH HOH . G 4 HOH A 182 982 195 HOH HOH . G 4 HOH A 183 983 198 HOH HOH . G 4 HOH A 184 984 200 HOH HOH . G 4 HOH A 185 985 201 HOH HOH . G 4 HOH A 186 986 202 HOH HOH . G 4 HOH A 187 987 203 HOH HOH . G 4 HOH A 188 988 204 HOH HOH . G 4 HOH A 189 989 206 HOH HOH . G 4 HOH A 190 990 207 HOH HOH . G 4 HOH A 191 991 208 HOH HOH . G 4 HOH A 192 992 209 HOH HOH . G 4 HOH A 193 993 210 HOH HOH . G 4 HOH A 194 994 211 HOH HOH . G 4 HOH A 195 995 214 HOH HOH . G 4 HOH A 196 996 215 HOH HOH . G 4 HOH A 197 997 216 HOH HOH . G 4 HOH A 198 998 218 HOH HOH . G 4 HOH A 199 999 219 HOH HOH . G 4 HOH A 200 1000 220 HOH HOH . G 4 HOH A 201 1001 223 HOH HOH . G 4 HOH A 202 1002 228 HOH HOH . G 4 HOH A 203 1003 229 HOH HOH . G 4 HOH A 204 1004 230 HOH HOH . G 4 HOH A 205 1005 232 HOH HOH . G 4 HOH A 206 1006 233 HOH HOH . G 4 HOH A 207 1007 235 HOH HOH . G 4 HOH A 208 1008 236 HOH HOH . G 4 HOH A 209 1009 237 HOH HOH . G 4 HOH A 210 1010 238 HOH HOH . G 4 HOH A 211 1011 240 HOH HOH . G 4 HOH A 212 1012 241 HOH HOH . G 4 HOH A 213 1013 246 HOH HOH . G 4 HOH A 214 1014 247 HOH HOH . G 4 HOH A 215 1015 250 HOH HOH . G 4 HOH A 216 1016 252 HOH HOH . G 4 HOH A 217 1017 254 HOH HOH . G 4 HOH A 218 1018 256 HOH HOH . G 4 HOH A 219 1019 258 HOH HOH . G 4 HOH A 220 1020 261 HOH HOH . G 4 HOH A 221 1021 262 HOH HOH . G 4 HOH A 222 1022 267 HOH HOH . G 4 HOH A 223 1023 269 HOH HOH . G 4 HOH A 224 1024 270 HOH HOH . G 4 HOH A 225 1025 275 HOH HOH . G 4 HOH A 226 1026 276 HOH HOH . G 4 HOH A 227 1027 277 HOH HOH . G 4 HOH A 228 1028 279 HOH HOH . G 4 HOH A 229 1029 281 HOH HOH . G 4 HOH A 230 1030 282 HOH HOH . G 4 HOH A 231 1031 283 HOH HOH . G 4 HOH A 232 1032 284 HOH HOH . G 4 HOH A 233 1033 285 HOH HOH . G 4 HOH A 234 1034 286 HOH HOH . G 4 HOH A 235 1035 287 HOH HOH . G 4 HOH A 236 1036 290 HOH HOH . G 4 HOH A 237 1037 291 HOH HOH . G 4 HOH A 238 1038 292 HOH HOH . G 4 HOH A 239 1039 295 HOH HOH . G 4 HOH A 240 1040 296 HOH HOH . G 4 HOH A 241 1041 298 HOH HOH . G 4 HOH A 242 1042 301 HOH HOH . G 4 HOH A 243 1043 303 HOH HOH . G 4 HOH A 244 1044 307 HOH HOH . G 4 HOH A 245 1045 308 HOH HOH . G 4 HOH A 246 1046 310 HOH HOH . G 4 HOH A 247 1047 311 HOH HOH . G 4 HOH A 248 1048 312 HOH HOH . G 4 HOH A 249 1049 313 HOH HOH . G 4 HOH A 250 1050 315 HOH HOH . G 4 HOH A 251 1051 317 HOH HOH . G 4 HOH A 252 1052 319 HOH HOH . G 4 HOH A 253 1053 321 HOH HOH . G 4 HOH A 254 1054 323 HOH HOH . G 4 HOH A 255 1055 324 HOH HOH . G 4 HOH A 256 1056 329 HOH HOH . G 4 HOH A 257 1057 332 HOH HOH . G 4 HOH A 258 1058 344 HOH HOH . G 4 HOH A 259 1059 353 HOH HOH . G 4 HOH A 260 1060 364 HOH HOH . G 4 HOH A 261 1061 365 HOH HOH . G 4 HOH A 262 1062 367 HOH HOH . G 4 HOH A 263 1063 369 HOH HOH . G 4 HOH A 264 1064 370 HOH HOH . G 4 HOH A 265 1065 371 HOH HOH . G 4 HOH A 266 1066 372 HOH HOH . G 4 HOH A 267 1067 373 HOH HOH . G 4 HOH A 268 1068 374 HOH HOH . G 4 HOH A 269 1069 375 HOH HOH . G 4 HOH A 270 1070 377 HOH HOH . G 4 HOH A 271 1071 378 HOH HOH . G 4 HOH A 272 1072 379 HOH HOH . G 4 HOH A 273 1073 380 HOH HOH . G 4 HOH A 274 1074 381 HOH HOH . G 4 HOH A 275 1075 382 HOH HOH . G 4 HOH A 276 1076 383 HOH HOH . G 4 HOH A 277 1077 384 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 188.207 _atom_site.Cartn_y 7.337 _atom_site.Cartn_z 19.498 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 704 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #