data_4N31
#
_model_server_result.job_id            XKaK5SUWMmTTfbm8PUHzbw 
_model_server_result.datetime_utc      '2024-11-23 19:49:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4n31 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    4N31 
#
_exptl.entry_id    4N31 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              734.039 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHATIDYLETHANOLAMINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4N31 
_cell.length_a            132.811 
_cell.length_b            132.811 
_cell.length_c            107.156 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4N31 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 132.811 0 0 
3 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 11_655 -x+y+1,y,-z -1 0 0 0 1 0 0 0 -1 132.811 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C40 H80 N O8 P' 
_chem_comp.formula_weight    734.039 
_chem_comp.id                PTY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHOSPHATIDYLETHANOLAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O4 PTY sing 268 n n 
C1 C6 PTY sing 269 n n 
C1 HC11 PTY sing 270 n n 
C1 HC12 PTY sing 271 n n 
C2 C3 PTY sing 272 n n 
C2 N1 PTY sing 273 n n 
C2 HC21 PTY sing 274 n n 
C2 HC22 PTY sing 275 n n 
C3 O11 PTY sing 276 n n 
C3 HC31 PTY sing 277 n n 
C3 HC32 PTY sing 278 n n 
O4 C30 PTY sing 279 n n 
C5 C6 PTY sing 280 n n 
C5 O14 PTY sing 281 n n 
C5 HC51 PTY sing 282 n n 
C5 HC52 PTY sing 283 n n 
C6 O7 PTY sing 284 n n 
C6 HC6 PTY sing 285 n n 
O7 C8 PTY sing 286 n n 
C8 O10 PTY doub 287 n n 
C8 C11 PTY sing 288 n n 
C11 C12 PTY sing 289 n n 
C11 H111 PTY sing 290 n n 
C11 H112 PTY sing 291 n n 
C12 C13 PTY sing 292 n n 
C12 H121 PTY sing 293 n n 
C12 H122 PTY sing 294 n n 
C13 C14 PTY sing 295 n n 
C13 H131 PTY sing 296 n n 
C13 H132 PTY sing 297 n n 
C14 C15 PTY sing 298 n n 
C14 H141 PTY sing 299 n n 
C14 H142 PTY sing 300 n n 
C15 C16 PTY sing 301 n n 
C15 H151 PTY sing 302 n n 
C15 H152 PTY sing 303 n n 
C16 C17 PTY sing 304 n n 
C16 H161 PTY sing 305 n n 
C16 H162 PTY sing 306 n n 
C17 C18 PTY sing 307 n n 
C17 H171 PTY sing 308 n n 
C17 H172 PTY sing 309 n n 
C18 C19 PTY sing 310 n n 
C18 H181 PTY sing 311 n n 
C18 H182 PTY sing 312 n n 
C19 C20 PTY sing 313 n n 
C19 H191 PTY sing 314 n n 
C19 H192 PTY sing 315 n n 
C20 C21 PTY sing 316 n n 
C20 H201 PTY sing 317 n n 
C20 H202 PTY sing 318 n n 
C21 C22 PTY sing 319 n n 
C21 H211 PTY sing 320 n n 
C21 H212 PTY sing 321 n n 
C22 C23 PTY sing 322 n n 
C22 H221 PTY sing 323 n n 
C22 H222 PTY sing 324 n n 
C23 C24 PTY sing 325 n n 
C23 H231 PTY sing 326 n n 
C23 H232 PTY sing 327 n n 
C24 C25 PTY sing 328 n n 
C24 H241 PTY sing 329 n n 
C24 H242 PTY sing 330 n n 
C25 C26 PTY sing 331 n n 
C25 H251 PTY sing 332 n n 
C25 H252 PTY sing 333 n n 
C26 C27 PTY sing 334 n n 
C26 H261 PTY sing 335 n n 
C26 H262 PTY sing 336 n n 
C27 C28 PTY sing 337 n n 
C27 H271 PTY sing 338 n n 
C27 H272 PTY sing 339 n n 
C28 C29 PTY sing 340 n n 
C28 H281 PTY sing 341 n n 
C28 H282 PTY sing 342 n n 
C29 H291 PTY sing 343 n n 
C29 H292 PTY sing 344 n n 
C29 H293 PTY sing 345 n n 
C30 C31 PTY sing 346 n n 
C30 O30 PTY doub 347 n n 
C31 C32 PTY sing 348 n n 
C31 H311 PTY sing 349 n n 
C31 H312 PTY sing 350 n n 
C32 C33 PTY sing 351 n n 
C32 H321 PTY sing 352 n n 
C32 H322 PTY sing 353 n n 
C33 C34 PTY sing 354 n n 
C33 H331 PTY sing 355 n n 
C33 H332 PTY sing 356 n n 
C34 C35 PTY sing 357 n n 
C34 H341 PTY sing 358 n n 
C34 H342 PTY sing 359 n n 
C35 C36 PTY sing 360 n n 
C35 H351 PTY sing 361 n n 
C35 H352 PTY sing 362 n n 
C36 C37 PTY sing 363 n n 
C36 H361 PTY sing 364 n n 
C36 H362 PTY sing 365 n n 
C37 C38 PTY sing 366 n n 
C37 H371 PTY sing 367 n n 
C37 H372 PTY sing 368 n n 
C38 C39 PTY sing 369 n n 
C38 H381 PTY sing 370 n n 
C38 H382 PTY sing 371 n n 
C39 C40 PTY sing 372 n n 
C39 H391 PTY sing 373 n n 
C39 H392 PTY sing 374 n n 
C40 C41 PTY sing 375 n n 
C40 H401 PTY sing 376 n n 
C40 H402 PTY sing 377 n n 
C41 C42 PTY sing 378 n n 
C41 H411 PTY sing 379 n n 
C41 H412 PTY sing 380 n n 
C42 C43 PTY sing 381 n n 
C42 H421 PTY sing 382 n n 
C42 H422 PTY sing 383 n n 
C43 C44 PTY sing 384 n n 
C43 H431 PTY sing 385 n n 
C43 H432 PTY sing 386 n n 
C44 H441 PTY sing 387 n n 
C44 H442 PTY sing 388 n n 
C44 H443 PTY sing 389 n n 
P1 O11 PTY sing 390 n n 
P1 O12 PTY sing 391 n n 
P1 O13 PTY doub 392 n n 
P1 O14 PTY sing 393 n n 
O12 H12O PTY sing 394 n n 
N1 HN11 PTY sing 395 n n 
N1 HN12 PTY sing 396 n n 
#
_atom_sites.entry_id                     4N31 
_atom_sites.fract_transf_matrix[1][1]    0.007529 
_atom_sites.fract_transf_matrix[1][2]    0.004347 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008694 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009332 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 201 1 PO4 PO4 . 
D 3 PTY B 1 201 1 PTY PTY . 
E 2 PO4 B 1 202 2 PO4 PO4 . 
F 4 HOH A 1 301 1 HOH HOH . 
F 4 HOH A 2 302 2 HOH HOH . 
F 4 HOH A 3 303 3 HOH HOH . 
F 4 HOH A 4 304 5 HOH HOH . 
F 4 HOH A 5 305 6 HOH HOH . 
F 4 HOH A 6 306 7 HOH HOH . 
F 4 HOH A 7 307 8 HOH HOH . 
F 4 HOH A 8 308 9 HOH HOH . 
F 4 HOH A 9 309 10 HOH HOH . 
F 4 HOH A 10 310 11 HOH HOH . 
F 4 HOH A 11 311 12 HOH HOH . 
F 4 HOH A 12 312 13 HOH HOH . 
F 4 HOH A 13 313 14 HOH HOH . 
F 4 HOH A 14 314 21 HOH HOH . 
F 4 HOH A 15 315 22 HOH HOH . 
F 4 HOH A 16 316 23 HOH HOH . 
F 4 HOH A 17 317 24 HOH HOH . 
F 4 HOH A 18 318 25 HOH HOH . 
F 4 HOH A 19 319 26 HOH HOH . 
F 4 HOH A 20 320 27 HOH HOH . 
F 4 HOH A 21 321 28 HOH HOH . 
F 4 HOH A 22 322 29 HOH HOH . 
F 4 HOH A 23 323 30 HOH HOH . 
F 4 HOH A 24 324 31 HOH HOH . 
F 4 HOH A 25 325 32 HOH HOH . 
F 4 HOH A 26 326 33 HOH HOH . 
F 4 HOH A 27 327 35 HOH HOH . 
F 4 HOH A 28 328 36 HOH HOH . 
F 4 HOH A 29 329 37 HOH HOH . 
F 4 HOH A 30 330 38 HOH HOH . 
F 4 HOH A 31 331 39 HOH HOH . 
F 4 HOH A 32 332 49 HOH HOH . 
F 4 HOH A 33 333 50 HOH HOH . 
F 4 HOH A 34 334 54 HOH HOH . 
F 4 HOH A 35 335 55 HOH HOH . 
F 4 HOH A 36 336 56 HOH HOH . 
F 4 HOH A 37 337 57 HOH HOH . 
F 4 HOH A 38 338 58 HOH HOH . 
F 4 HOH A 39 339 59 HOH HOH . 
F 4 HOH A 40 340 60 HOH HOH . 
F 4 HOH A 41 341 63 HOH HOH . 
F 4 HOH A 42 342 64 HOH HOH . 
F 4 HOH A 43 343 65 HOH HOH . 
F 4 HOH A 44 344 69 HOH HOH . 
F 4 HOH A 45 345 76 HOH HOH . 
F 4 HOH A 46 346 78 HOH HOH . 
F 4 HOH A 47 347 82 HOH HOH . 
G 4 HOH B 1 301 4 HOH HOH . 
G 4 HOH B 2 302 15 HOH HOH . 
G 4 HOH B 3 303 16 HOH HOH . 
G 4 HOH B 4 304 17 HOH HOH . 
G 4 HOH B 5 305 18 HOH HOH . 
G 4 HOH B 6 306 19 HOH HOH . 
G 4 HOH B 7 307 20 HOH HOH . 
G 4 HOH B 8 308 34 HOH HOH . 
G 4 HOH B 9 309 40 HOH HOH . 
G 4 HOH B 10 310 41 HOH HOH . 
G 4 HOH B 11 311 42 HOH HOH . 
G 4 HOH B 12 312 43 HOH HOH . 
G 4 HOH B 13 313 44 HOH HOH . 
G 4 HOH B 14 314 45 HOH HOH . 
G 4 HOH B 15 315 46 HOH HOH . 
G 4 HOH B 16 316 47 HOH HOH . 
G 4 HOH B 17 317 48 HOH HOH . 
G 4 HOH B 18 318 51 HOH HOH . 
G 4 HOH B 19 319 52 HOH HOH . 
G 4 HOH B 20 320 53 HOH HOH . 
G 4 HOH B 21 321 61 HOH HOH . 
G 4 HOH B 22 322 66 HOH HOH . 
G 4 HOH B 23 323 67 HOH HOH . 
G 4 HOH B 24 324 68 HOH HOH . 
G 4 HOH B 25 325 70 HOH HOH . 
G 4 HOH B 26 326 72 HOH HOH . 
G 4 HOH B 27 327 73 HOH HOH . 
G 4 HOH B 28 328 80 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PTY . . . D 3 54.917 4.427 -4.903 1 73.06 ? C1 PTY 201 B 1 
HETATM 2 C C2 PTY . . . D 3 49.212 5.231 -4.677 1 83.53 ? C2 PTY 201 B 1 
HETATM 3 C C3 PTY . . . D 3 49.417 5.823 -3.285 1 84.05 ? C3 PTY 201 B 1 
HETATM 4 O O4 PTY . . . D 3 55.201 5.755 -5.351 1 67.43 ? O4 PTY 201 B 1 
HETATM 5 C C5 PTY . . . D 3 53.233 5.207 -3.196 1 73.58 ? C5 PTY 201 B 1 
HETATM 6 C C6 PTY . . . D 3 54.54 4.397 -3.425 1 67.33 ? C6 PTY 201 B 1 
HETATM 7 O O7 PTY . . . D 3 55.712 4.812 -2.664 1 56.26 ? O7 PTY 201 B 1 
HETATM 8 C C8 PTY . . . D 3 55.918 3.731 -1.928 1 74.05 ? C8 PTY 201 B 1 
HETATM 9 O O10 PTY . . . D 3 54.989 3.213 -1.314 1 77.77 ? O10 PTY 201 B 1 
HETATM 10 C C11 PTY . . . D 3 57.116 2.89 -2.399 1 97.68 ? C11 PTY 201 B 1 
HETATM 11 C C12 PTY . . . D 3 58.393 3.186 -1.609 1 87.67 ? C12 PTY 201 B 1 
HETATM 12 C C13 PTY . . . D 3 59.158 1.865 -1.383 1 79.83 ? C13 PTY 201 B 1 
HETATM 13 C C14 PTY . . . D 3 60.35 1.7 -2.362 1 82.05 ? C14 PTY 201 B 1 
HETATM 14 C C15 PTY . . . D 3 61.131 0.439 -1.947 1 91.88 ? C15 PTY 201 B 1 
HETATM 15 C C16 PTY . . . D 3 61.712 -0.323 -3.149 0.5 75.65 ? C16 PTY 201 B 1 
HETATM 16 C C17 PTY . . . D 3 62.149 -1.715 -2.663 0.5 60.05 ? C17 PTY 201 B 1 
HETATM 17 C C18 PTY . . . D 3 63.494 -2.099 -3.272 0.5 65 ? C18 PTY 201 B 1 
HETATM 18 C C30 PTY . . . D 3 56.477 5.841 -5.835 1 56.44 ? C30 PTY 201 B 1 
HETATM 19 C C31 PTY . . . D 3 56.709 6.924 -6.886 1 50.78 ? C31 PTY 201 B 1 
HETATM 20 O O30 PTY . . . D 3 57.406 5.203 -5.364 1 92.34 ? O30 PTY 201 B 1 
HETATM 21 C C32 PTY . . . D 3 58.121 6.932 -7.453 1 49.91 ? C32 PTY 201 B 1 
HETATM 22 C C33 PTY . . . D 3 58.272 5.807 -8.444 1 53.05 ? C33 PTY 201 B 1 
HETATM 23 C C34 PTY . . . D 3 59.414 6.048 -9.408 1 46.93 ? C34 PTY 201 B 1 
HETATM 24 C C35 PTY . . . D 3 60.335 4.817 -9.419 1 54.22 ? C35 PTY 201 B 1 
HETATM 25 C C36 PTY . . . D 3 61.78 5.237 -9.645 1 52.73 ? C36 PTY 201 B 1 
HETATM 26 C C37 PTY . . . D 3 62.743 4.381 -8.806 1 65.4 ? C37 PTY 201 B 1 
HETATM 27 C C38 PTY . . . D 3 63.941 5.251 -8.311 1 66.63 ? C38 PTY 201 B 1 
HETATM 28 C C39 PTY . . . D 3 65.254 4.773 -8.963 1 80.9 ? C39 PTY 201 B 1 
HETATM 29 C C40 PTY . . . D 3 66.506 5.461 -8.376 1 67 ? C40 PTY 201 B 1 
HETATM 30 C C41 PTY . . . D 3 67.259 4.451 -7.468 1 66.35 ? C41 PTY 201 B 1 
HETATM 31 C C42 PTY . . . D 3 68.759 4.81 -7.339 1 56.26 ? C42 PTY 201 B 1 
HETATM 32 C C43 PTY . . . D 3 69.468 3.999 -6.219 1 61.82 ? C43 PTY 201 B 1 
HETATM 33 C C44 PTY . . . D 3 70.976 4.369 -6.169 1 44.05 ? C44 PTY 201 B 1 
HETATM 34 P P1 PTY . . . D 3 51.368 5.841 -1.428 1 53.92 ? P1 PTY 201 B 1 
HETATM 35 O O11 PTY . . . D 3 50.634 5.274 -2.764 1 75.42 ? O11 PTY 201 B 1 
HETATM 36 O O12 PTY . . . D 3 51.3 7.448 -1.563 1 53.95 ? O12 PTY 201 B 1 
HETATM 37 O O13 PTY . . . D 3 50.856 5.355 -0.119 1 58.05 ? O13 PTY 201 B 1 
HETATM 38 O O14 PTY . . . D 3 52.871 5.312 -1.782 1 75.87 ? O14 PTY 201 B 1 
HETATM 39 N N1 PTY . . . D 3 50.005 3.978 -4.854 1 54.17 ? N1 PTY 201 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           39 
#