data_4N4D # _model_server_result.job_id 9zz7ecFZEm_m8JUizZMSKg _model_server_result.datetime_utc '2024-11-05 08:05:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n4d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":208}' # _entry.id 4N4D # _exptl.entry_id 4N4D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.383 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.17 _cell.angle_gamma 90 _cell.entry_id 4N4D _cell.length_a 63.16 _cell.length_b 84.26 _cell.length_c 127.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N4D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,GA 1 1 B,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,HA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id BA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H30 O8' _chem_comp.formula_weight 326.383 _chem_comp.id P33 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HEPTAETHYLENE GLYCOL;PEG330' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C21 P33 sing 310 n n O22 H22 P33 sing 311 n n C21 C20 P33 sing 312 n n C21 H211 P33 sing 313 n n C21 H212 P33 sing 314 n n C20 O19 P33 sing 315 n n C20 H201 P33 sing 316 n n C20 H202 P33 sing 317 n n O19 C18 P33 sing 318 n n C18 C17 P33 sing 319 n n C18 H181 P33 sing 320 n n C18 H182 P33 sing 321 n n C17 O16 P33 sing 322 n n C17 H171 P33 sing 323 n n C17 H172 P33 sing 324 n n O16 C15 P33 sing 325 n n C15 C14 P33 sing 326 n n C15 H151 P33 sing 327 n n C15 H152 P33 sing 328 n n C14 O13 P33 sing 329 n n C14 H141 P33 sing 330 n n C14 H142 P33 sing 331 n n O13 C12 P33 sing 332 n n C12 C11 P33 sing 333 n n C12 H121 P33 sing 334 n n C12 H122 P33 sing 335 n n C11 O10 P33 sing 336 n n C11 H111 P33 sing 337 n n C11 H112 P33 sing 338 n n O10 C9 P33 sing 339 n n C9 C8 P33 sing 340 n n C9 H91 P33 sing 341 n n C9 H92 P33 sing 342 n n C8 O7 P33 sing 343 n n C8 H81 P33 sing 344 n n C8 H82 P33 sing 345 n n O7 C6 P33 sing 346 n n C6 C5 P33 sing 347 n n C6 H61 P33 sing 348 n n C6 H62 P33 sing 349 n n C5 O4 P33 sing 350 n n C5 H51 P33 sing 351 n n C5 H52 P33 sing 352 n n O4 C3 P33 sing 353 n n C3 C2 P33 sing 354 n n C3 H31 P33 sing 355 n n C3 H32 P33 sing 356 n n C2 O1 P33 sing 357 n n C2 H21 P33 sing 358 n n C2 H22A P33 sing 359 n n O1 HO1 P33 sing 360 n n # _atom_sites.entry_id 4N4D _atom_sites.fract_transf_matrix[1][1] 0.015833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001155 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007879 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XX8 A 1 201 2 XX8 XX8 . D 3 BNG A 1 202 4 BNG BNG . E 3 BNG A 1 203 5 BNG BNG . F 3 BNG A 1 204 6 BNG BNG . G 4 PG0 A 1 205 1 PG0 PG0 . H 4 PG0 A 1 206 2 PG0 PG0 . I 5 PEG A 1 207 3 PEG PEG . J 5 PEG A 1 208 8 PEG PEG . K 5 PEG A 1 209 13 PEG PEG . L 5 PEG A 1 210 17 PEG PEG . M 5 PEG A 1 211 18 PEG PEG . N 5 PEG A 1 212 19 PEG PEG . O 6 PG4 A 1 213 2 PG4 PG4 . P 7 PGE A 1 214 2 PGE PGE . Q 7 PGE A 1 215 3 PGE PGE . R 7 PGE A 1 216 5 PGE PGE . S 7 PGE A 1 217 6 PGE PGE . T 8 1PE A 1 218 1 1PE 1PE . U 2 XX8 B 1 201 1 XX8 XX8 . V 3 BNG B 1 202 2 BNG BNG . W 3 BNG B 1 203 3 BNG BNG . X 4 PG0 B 1 204 4 PG0 PG0 . Y 5 PEG B 1 205 14 PEG PEG . Z 5 PEG B 1 206 20 PEG PEG . AA 6 PG4 B 1 207 4 PG4 PG4 . BA 9 P33 B 1 208 3 P33 P33 . CA 7 PGE B 1 209 4 PGE PGE . DA 7 PGE B 1 210 7 PGE PGE . EA 8 1PE B 1 211 2 1PE 1PE . FA 10 CL B 1 212 1 CL CL . GA 11 HOH A 1 301 2 HOH HOH . GA 11 HOH A 2 302 9 HOH HOH . GA 11 HOH A 3 303 10 HOH HOH . GA 11 HOH A 4 304 37 HOH HOH . GA 11 HOH A 5 305 38 HOH HOH . GA 11 HOH A 6 306 40 HOH HOH . GA 11 HOH A 7 307 41 HOH HOH . GA 11 HOH A 8 308 42 HOH HOH . GA 11 HOH A 9 309 44 HOH HOH . GA 11 HOH A 10 310 45 HOH HOH . GA 11 HOH A 11 311 46 HOH HOH . GA 11 HOH A 12 312 47 HOH HOH . GA 11 HOH A 13 313 48 HOH HOH . GA 11 HOH A 14 314 49 HOH HOH . GA 11 HOH A 15 315 50 HOH HOH . GA 11 HOH A 16 316 51 HOH HOH . GA 11 HOH A 17 317 52 HOH HOH . GA 11 HOH A 18 318 67 HOH HOH . GA 11 HOH A 19 319 71 HOH HOH . GA 11 HOH A 20 320 72 HOH HOH . HA 11 HOH B 1 301 1 HOH HOH . HA 11 HOH B 2 302 12 HOH HOH . HA 11 HOH B 3 303 13 HOH HOH . HA 11 HOH B 4 304 14 HOH HOH . HA 11 HOH B 5 305 15 HOH HOH . HA 11 HOH B 6 306 16 HOH HOH . HA 11 HOH B 7 307 18 HOH HOH . HA 11 HOH B 8 308 19 HOH HOH . HA 11 HOH B 9 309 20 HOH HOH . HA 11 HOH B 10 310 21 HOH HOH . HA 11 HOH B 11 311 34 HOH HOH . HA 11 HOH B 12 312 36 HOH HOH . HA 11 HOH B 13 313 54 HOH HOH . HA 11 HOH B 14 314 55 HOH HOH . HA 11 HOH B 15 315 56 HOH HOH . HA 11 HOH B 16 316 58 HOH HOH . HA 11 HOH B 17 317 59 HOH HOH . HA 11 HOH B 18 318 60 HOH HOH . HA 11 HOH B 19 319 61 HOH HOH . HA 11 HOH B 20 320 62 HOH HOH . HA 11 HOH B 21 321 63 HOH HOH . HA 11 HOH B 22 322 64 HOH HOH . HA 11 HOH B 23 323 65 HOH HOH . HA 11 HOH B 24 324 73 HOH HOH . HA 11 HOH B 25 325 74 HOH HOH . HA 11 HOH B 26 326 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 P33 . . . BA 9 35.394 22.615 -1.691 0.67 50.98 ? O22 P33 208 B 1 HETATM 2 C C21 P33 . . . BA 9 36.285 22.213 -0.626 0.67 50.85 ? C21 P33 208 B 1 HETATM 3 C C20 P33 . . . BA 9 36.004 20.784 -0.225 0.67 52.67 ? C20 P33 208 B 1 HETATM 4 O O19 P33 . . . BA 9 37.228 20.047 -0.073 0.67 54.74 ? O19 P33 208 B 1 HETATM 5 C C18 P33 . . . BA 9 37.071 18.761 0.525 0.67 51.15 ? C18 P33 208 B 1 HETATM 6 C C17 P33 . . . BA 9 35.627 18.28 0.201 0.67 60.24 ? C17 P33 208 B 1 HETATM 7 O O16 P33 . . . BA 9 35.404 16.951 0.656 0.67 61.63 ? O16 P33 208 B 1 HETATM 8 C C15 P33 . . . BA 9 34.317 16.793 1.562 0.67 60.59 ? C15 P33 208 B 1 HETATM 9 C C14 P33 . . . BA 9 33.171 15.877 0.963 0.67 53.05 ? C14 P33 208 B 1 HETATM 10 O O13 P33 . . . BA 9 32.797 16.387 -0.362 0.67 45.01 ? O13 P33 208 B 1 HETATM 11 C C12 P33 . . . BA 9 31.922 17.591 -0.34 0.67 53.03 ? C12 P33 208 B 1 HETATM 12 C C11 P33 . . . BA 9 30.565 17.263 -1.042 0.67 57.5 ? C11 P33 208 B 1 HETATM 13 O O10 P33 . . . BA 9 29.428 18.014 -0.474 0.67 59.45 ? O10 P33 208 B 1 HETATM 14 C C9 P33 . . . BA 9 28.389 18.301 -1.424 0.67 58.8 ? C9 P33 208 B 1 HETATM 15 C C8 P33 . . . BA 9 28.432 17.303 -2.59 0.67 56.47 ? C8 P33 208 B 1 HETATM 16 O O7 P33 . . . BA 9 27.331 16.384 -2.532 0.67 48 ? O7 P33 208 B 1 HETATM 17 C C6 P33 . . . BA 9 27.447 15.218 -1.701 0.67 40.27 ? C6 P33 208 B 1 HETATM 18 C C5 P33 . . . BA 9 26.089 14.544 -1.724 0.67 48.54 ? C5 P33 208 B 1 HETATM 19 O O4 P33 . . . BA 9 26.109 13.242 -2.338 0.67 54.73 ? O4 P33 208 B 1 HETATM 20 C C3 P33 . . . BA 9 24.853 12.558 -2.255 0.67 50.12 ? C3 P33 208 B 1 HETATM 21 C C2 P33 . . . BA 9 24.574 11.726 -3.551 0.67 68.21 ? C2 P33 208 B 1 HETATM 22 O O1 P33 . . . BA 9 23.648 10.656 -3.273 0.67 68.95 ? O1 P33 208 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #