data_4N4D # _model_server_result.job_id xVZ886pmzbc_WTKxqlKEMw _model_server_result.datetime_utc '2024-11-23 05:51:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n4d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"EA","auth_seq_id":211}' # _entry.id 4N4D # _exptl.entry_id 4N4D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.17 _cell.angle_gamma 90 _cell.entry_id 4N4D _cell.length_a 63.16 _cell.length_b 84.26 _cell.length_c 127.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N4D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,GA 1 1 B,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,HA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 T N N ? 8 EA N N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 4N4D _atom_sites.fract_transf_matrix[1][1] 0.015833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001155 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007879 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XX8 A 1 201 2 XX8 XX8 . D 3 BNG A 1 202 4 BNG BNG . E 3 BNG A 1 203 5 BNG BNG . F 3 BNG A 1 204 6 BNG BNG . G 4 PG0 A 1 205 1 PG0 PG0 . H 4 PG0 A 1 206 2 PG0 PG0 . I 5 PEG A 1 207 3 PEG PEG . J 5 PEG A 1 208 8 PEG PEG . K 5 PEG A 1 209 13 PEG PEG . L 5 PEG A 1 210 17 PEG PEG . M 5 PEG A 1 211 18 PEG PEG . N 5 PEG A 1 212 19 PEG PEG . O 6 PG4 A 1 213 2 PG4 PG4 . P 7 PGE A 1 214 2 PGE PGE . Q 7 PGE A 1 215 3 PGE PGE . R 7 PGE A 1 216 5 PGE PGE . S 7 PGE A 1 217 6 PGE PGE . T 8 1PE A 1 218 1 1PE 1PE . U 2 XX8 B 1 201 1 XX8 XX8 . V 3 BNG B 1 202 2 BNG BNG . W 3 BNG B 1 203 3 BNG BNG . X 4 PG0 B 1 204 4 PG0 PG0 . Y 5 PEG B 1 205 14 PEG PEG . Z 5 PEG B 1 206 20 PEG PEG . AA 6 PG4 B 1 207 4 PG4 PG4 . BA 9 P33 B 1 208 3 P33 P33 . CA 7 PGE B 1 209 4 PGE PGE . DA 7 PGE B 1 210 7 PGE PGE . EA 8 1PE B 1 211 2 1PE 1PE . FA 10 CL B 1 212 1 CL CL . GA 11 HOH A 1 301 2 HOH HOH . GA 11 HOH A 2 302 9 HOH HOH . GA 11 HOH A 3 303 10 HOH HOH . GA 11 HOH A 4 304 37 HOH HOH . GA 11 HOH A 5 305 38 HOH HOH . GA 11 HOH A 6 306 40 HOH HOH . GA 11 HOH A 7 307 41 HOH HOH . GA 11 HOH A 8 308 42 HOH HOH . GA 11 HOH A 9 309 44 HOH HOH . GA 11 HOH A 10 310 45 HOH HOH . GA 11 HOH A 11 311 46 HOH HOH . GA 11 HOH A 12 312 47 HOH HOH . GA 11 HOH A 13 313 48 HOH HOH . GA 11 HOH A 14 314 49 HOH HOH . GA 11 HOH A 15 315 50 HOH HOH . GA 11 HOH A 16 316 51 HOH HOH . GA 11 HOH A 17 317 52 HOH HOH . GA 11 HOH A 18 318 67 HOH HOH . GA 11 HOH A 19 319 71 HOH HOH . GA 11 HOH A 20 320 72 HOH HOH . HA 11 HOH B 1 301 1 HOH HOH . HA 11 HOH B 2 302 12 HOH HOH . HA 11 HOH B 3 303 13 HOH HOH . HA 11 HOH B 4 304 14 HOH HOH . HA 11 HOH B 5 305 15 HOH HOH . HA 11 HOH B 6 306 16 HOH HOH . HA 11 HOH B 7 307 18 HOH HOH . HA 11 HOH B 8 308 19 HOH HOH . HA 11 HOH B 9 309 20 HOH HOH . HA 11 HOH B 10 310 21 HOH HOH . HA 11 HOH B 11 311 34 HOH HOH . HA 11 HOH B 12 312 36 HOH HOH . HA 11 HOH B 13 313 54 HOH HOH . HA 11 HOH B 14 314 55 HOH HOH . HA 11 HOH B 15 315 56 HOH HOH . HA 11 HOH B 16 316 58 HOH HOH . HA 11 HOH B 17 317 59 HOH HOH . HA 11 HOH B 18 318 60 HOH HOH . HA 11 HOH B 19 319 61 HOH HOH . HA 11 HOH B 20 320 62 HOH HOH . HA 11 HOH B 21 321 63 HOH HOH . HA 11 HOH B 22 322 64 HOH HOH . HA 11 HOH B 23 323 65 HOH HOH . HA 11 HOH B 24 324 73 HOH HOH . HA 11 HOH B 25 325 74 HOH HOH . HA 11 HOH B 26 326 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . EA 8 14.857 16.388 27.863 1 80.12 ? OH2 1PE 211 B 1 HETATM 2 C C12 1PE . . . EA 8 15.754 15.429 28.388 1 82.04 ? C12 1PE 211 B 1 HETATM 3 C C22 1PE . . . EA 8 15.499 14.059 27.769 1 78.21 ? C22 1PE 211 B 1 HETATM 4 O OH3 1PE . . . EA 8 16.556 13.157 28.124 1 69.67 ? OH3 1PE 211 B 1 HETATM 5 C C13 1PE . . . EA 8 18.935 12.513 28.148 1 49.23 ? C13 1PE 211 B 1 HETATM 6 C C23 1PE . . . EA 8 17.868 13.546 27.669 1 64.53 ? C23 1PE 211 B 1 HETATM 7 O OH4 1PE . . . EA 8 18.606 11.178 27.704 1 65.81 ? OH4 1PE 211 B 1 HETATM 8 C C14 1PE . . . EA 8 20.555 11.428 26.254 1 79.33 ? C14 1PE 211 B 1 HETATM 9 C C24 1PE . . . EA 8 19.749 10.472 27.103 1 77.86 ? C24 1PE 211 B 1 HETATM 10 O OH5 1PE . . . EA 8 21.902 11.434 26.697 1 80.18 ? OH5 1PE 211 B 1 HETATM 11 C C15 1PE . . . EA 8 23.368 11.548 28.635 1 74.62 ? C15 1PE 211 B 1 HETATM 12 C C25 1PE . . . EA 8 22.024 11.841 28.074 1 75.45 ? C25 1PE 211 B 1 HETATM 13 O OH6 1PE . . . EA 8 24.412 12.108 27.752 1 74.97 ? OH6 1PE 211 B 1 HETATM 14 C C16 1PE . . . EA 8 25.882 13.982 27.729 1 55.74 ? C16 1PE 211 B 1 HETATM 15 C C26 1PE . . . EA 8 25.527 12.666 28.439 1 60.41 ? C26 1PE 211 B 1 HETATM 16 O OH7 1PE . . . EA 8 27.114 14.507 28.275 1 59.68 ? OH7 1PE 211 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #