data_4N6H # _model_server_result.job_id AD9x9wwsy-BbTyhXjzgBWg _model_server_result.datetime_utc '2024-11-22 23:17:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":1219}' # _entry.id 4N6H # _exptl.entry_id 4N6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.496 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4bS,8R,8aS,14bR)-7-(cyclopropylmethyl)-5,6,7,8,14,14b-hexahydro-4,8-methano[1]benzofuro[2,3-a]pyrido[4,3-b]carbazole-1,8a(9H)-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.48 _cell.angle_gamma 90 _cell.entry_id 4N6H _cell.length_a 86.23 _cell.length_b 72.851 _cell.length_c 84.408 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id T _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 121 1_555 A SG CYS 274 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc1 A OD1 ASP 171 A ASP 95 1_555 U NA NA . A NA 1220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc2 A OD1 ASN 207 A ASN 131 1_555 U NA NA . A NA 1220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc3 A OG SER 211 A SER 135 1_555 U NA NA . A NA 1220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc4 U NA NA . A NA 1220 1_555 Y O HOH . A HOH 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc5 U NA NA . A NA 1220 1_555 Y O HOH . A HOH 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? # _chem_comp.formula 'C26 H26 N2 O3' _chem_comp.formula_weight 414.496 _chem_comp.id EJ4 _chem_comp.mon_nstd_flag . _chem_comp.name (4bS,8R,8aS,14bR)-7-(cyclopropylmethyl)-5,6,7,8,14,14b-hexahydro-4,8-methano[1]benzofuro[2,3-a]pyrido[4,3-b]carbazole-1,8a(9H)-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Naltrindole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAK CAL EJ4 doub 83 n y CAK CAJ EJ4 sing 84 n y CAL CAM EJ4 sing 85 n y CAJ CAI EJ4 doub 86 n y CAM NAN EJ4 sing 87 n y CAM CAH EJ4 doub 88 n y NAN CAF EJ4 sing 89 n y CAI CAH EJ4 sing 90 n y CAH CAG EJ4 sing 91 n y CAF CAG EJ4 doub 92 n y CAF CAE EJ4 sing 93 n n CAG CAO EJ4 sing 94 n n CAE OAD EJ4 sing 95 n n CAE CAV EJ4 sing 96 n n OAD CAC EJ4 sing 97 n n CAO CAP EJ4 sing 98 n n OAQ CAP EJ4 sing 99 n n CAP CAV EJ4 sing 100 n n CAP CAR EJ4 sing 101 n n CAV CAW EJ4 sing 102 n n CAV CAU EJ4 sing 103 n n CAC CAW EJ4 doub 104 n y CAC CAB EJ4 sing 105 n y OAA CAB EJ4 sing 106 n n CAW CAX EJ4 sing 107 n y CAU CAT EJ4 sing 108 n n CAB CAZ EJ4 doub 109 n y CAR CBA EJ4 sing 110 n n CAR NAS EJ4 sing 111 n n CAX CBA EJ4 sing 112 n n CAX CAY EJ4 doub 113 n y CAZ CAY EJ4 sing 114 n y NAS CAT EJ4 sing 115 n n NAS CBB EJ4 sing 116 n n CBB CBC EJ4 sing 117 n n CBD CBC EJ4 sing 118 n n CBD CBE EJ4 sing 119 n n CBC CBE EJ4 sing 120 n n CAE H1 EJ4 sing 121 n n CAI H2 EJ4 sing 122 n n CAJ H3 EJ4 sing 123 n n CAK H4 EJ4 sing 124 n n CAL H5 EJ4 sing 125 n n CAO H6 EJ4 sing 126 n n CAO H7 EJ4 sing 127 n n CAR H8 EJ4 sing 128 n n CAT H9 EJ4 sing 129 n n CAT H10 EJ4 sing 130 n n CAU H11 EJ4 sing 131 n n CAU H12 EJ4 sing 132 n n CAY H13 EJ4 sing 133 n n CAZ H14 EJ4 sing 134 n n NAN H15 EJ4 sing 135 n n OAA H17 EJ4 sing 136 n n OAQ H18 EJ4 sing 137 n n CBA H19 EJ4 sing 138 n n CBA H20 EJ4 sing 139 n n CBB H21 EJ4 sing 140 n n CBB H22 EJ4 sing 141 n n CBC H23 EJ4 sing 142 n n CBD H24 EJ4 sing 143 n n CBD H25 EJ4 sing 144 n n CBE H26 EJ4 sing 145 n n CBE H27 EJ4 sing 146 n n # _atom_sites.entry_id 4N6H _atom_sites.fract_transf_matrix[1][1] 0.011597 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003651 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01242 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 1201 3 OLA OLA . C 2 OLA A 1 1202 4 OLA OLA . D 2 OLA A 1 1203 6 OLA OLA . E 2 OLA A 1 1204 7 OLA OLA . F 2 OLA A 1 1205 9 OLA OLA . G 2 OLA A 1 1206 12 OLA OLA . H 3 OLC A 1 1207 13 OLC OLC . I 3 OLC A 1 1208 14 OLC OLC . J 2 OLA A 1 1209 15 OLA OLA . K 2 OLA A 1 1210 16 OLA OLA . L 2 OLA A 1 1211 17 OLA OLA . M 3 OLC A 1 1212 19 OLC OLC . N 4 PGE A 1 1213 21 PGE PGE . O 4 PGE A 1 1214 22 PGE PGE . P 2 OLA A 1 1215 1 OLA OLA . Q 2 OLA A 1 1216 2 OLA OLA . R 2 OLA A 1 1217 3 OLA OLA . S 5 TLA A 1 1218 1 TLA TLA . T 6 EJ4 A 1 1219 500 EJ4 EJ4 . U 7 NA A 1 1220 1 NA NA . V 4 PGE A 1 1221 2 PGE PGE . W 3 OLC A 1 1222 1 OLC OLC . X 3 OLC A 1 1223 2 OLC OLC . Y 8 HOH A 1 1301 101 HOH HOH . Y 8 HOH A 2 1302 102 HOH HOH . Y 8 HOH A 3 1303 103 HOH HOH . Y 8 HOH A 4 1304 104 HOH HOH . Y 8 HOH A 5 1305 105 HOH HOH . Y 8 HOH A 6 1306 106 HOH HOH . Y 8 HOH A 7 1307 107 HOH HOH . Y 8 HOH A 8 1308 108 HOH HOH . Y 8 HOH A 9 1309 109 HOH HOH . Y 8 HOH A 10 1310 110 HOH HOH . Y 8 HOH A 11 1311 115 HOH HOH . Y 8 HOH A 12 1312 116 HOH HOH . Y 8 HOH A 13 1313 117 HOH HOH . Y 8 HOH A 14 1314 118 HOH HOH . Y 8 HOH A 15 1315 119 HOH HOH . Y 8 HOH A 16 1316 120 HOH HOH . Y 8 HOH A 17 1317 121 HOH HOH . Y 8 HOH A 18 1318 122 HOH HOH . Y 8 HOH A 19 1319 123 HOH HOH . Y 8 HOH A 20 1320 124 HOH HOH . Y 8 HOH A 21 1321 125 HOH HOH . Y 8 HOH A 22 1322 201 HOH HOH . Y 8 HOH A 23 1323 202 HOH HOH . Y 8 HOH A 24 1324 203 HOH HOH . Y 8 HOH A 25 1325 204 HOH HOH . Y 8 HOH A 26 1326 205 HOH HOH . Y 8 HOH A 27 1327 206 HOH HOH . Y 8 HOH A 28 1328 209 HOH HOH . Y 8 HOH A 29 1329 210 HOH HOH . Y 8 HOH A 30 1330 214 HOH HOH . Y 8 HOH A 31 1331 215 HOH HOH . Y 8 HOH A 32 1332 216 HOH HOH . Y 8 HOH A 33 1333 217 HOH HOH . Y 8 HOH A 34 1334 218 HOH HOH . Y 8 HOH A 35 1335 219 HOH HOH . Y 8 HOH A 36 1336 220 HOH HOH . Y 8 HOH A 37 1337 227 HOH HOH . Y 8 HOH A 38 1338 231 HOH HOH . Y 8 HOH A 39 1339 232 HOH HOH . Y 8 HOH A 40 1340 236 HOH HOH . Y 8 HOH A 41 1341 239 HOH HOH . Y 8 HOH A 42 1342 240 HOH HOH . Y 8 HOH A 43 1343 241 HOH HOH . Y 8 HOH A 44 1344 243 HOH HOH . Y 8 HOH A 45 1345 244 HOH HOH . Y 8 HOH A 46 1346 245 HOH HOH . Y 8 HOH A 47 1347 246 HOH HOH . Y 8 HOH A 48 1348 249 HOH HOH . Y 8 HOH A 49 1349 250 HOH HOH . Y 8 HOH A 50 1350 251 HOH HOH . Y 8 HOH A 51 1351 252 HOH HOH . Y 8 HOH A 52 1352 255 HOH HOH . Y 8 HOH A 53 1353 256 HOH HOH . Y 8 HOH A 54 1354 257 HOH HOH . Y 8 HOH A 55 1355 258 HOH HOH . Y 8 HOH A 56 1356 259 HOH HOH . Y 8 HOH A 57 1357 261 HOH HOH . Y 8 HOH A 58 1358 263 HOH HOH . Y 8 HOH A 59 1359 264 HOH HOH . Y 8 HOH A 60 1360 265 HOH HOH . Y 8 HOH A 61 1361 266 HOH HOH . Y 8 HOH A 62 1362 267 HOH HOH . Y 8 HOH A 63 1363 270 HOH HOH . Y 8 HOH A 64 1364 271 HOH HOH . Y 8 HOH A 65 1365 272 HOH HOH . Y 8 HOH A 66 1366 273 HOH HOH . Y 8 HOH A 67 1367 274 HOH HOH . Y 8 HOH A 68 1368 277 HOH HOH . Y 8 HOH A 69 1369 278 HOH HOH . Y 8 HOH A 70 1370 283 HOH HOH . Y 8 HOH A 71 1371 284 HOH HOH . Y 8 HOH A 72 1372 286 HOH HOH . Y 8 HOH A 73 1373 287 HOH HOH . Y 8 HOH A 74 1374 288 HOH HOH . Y 8 HOH A 75 1375 289 HOH HOH . Y 8 HOH A 76 1376 291 HOH HOH . Y 8 HOH A 77 1377 293 HOH HOH . Y 8 HOH A 78 1378 294 HOH HOH . Y 8 HOH A 79 1379 298 HOH HOH . Y 8 HOH A 80 1380 299 HOH HOH . Y 8 HOH A 81 1381 300 HOH HOH . Y 8 HOH A 82 1382 303 HOH HOH . Y 8 HOH A 83 1383 304 HOH HOH . Y 8 HOH A 84 1384 305 HOH HOH . Y 8 HOH A 85 1385 306 HOH HOH . Y 8 HOH A 86 1386 307 HOH HOH . Y 8 HOH A 87 1387 308 HOH HOH . Y 8 HOH A 88 1388 311 HOH HOH . Y 8 HOH A 89 1389 312 HOH HOH . Y 8 HOH A 90 1390 371 HOH HOH . Y 8 HOH A 91 1391 373 HOH HOH . Y 8 HOH A 92 1392 374 HOH HOH . Y 8 HOH A 93 1393 375 HOH HOH . Y 8 HOH A 94 1394 376 HOH HOH . Y 8 HOH A 95 1395 380 HOH HOH . Y 8 HOH A 96 1396 381 HOH HOH . Y 8 HOH A 97 1397 382 HOH HOH . Y 8 HOH A 98 1398 383 HOH HOH . Y 8 HOH A 99 1399 384 HOH HOH . Y 8 HOH A 100 1400 386 HOH HOH . Y 8 HOH A 101 1401 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB EJ4 . . . T 6 -6.217 -65.863 71.51 1 25.86 ? CAB EJ4 1219 A 1 HETATM 2 C CAC EJ4 . . . T 6 -6.857 -67.021 71.104 1 25.8 ? CAC EJ4 1219 A 1 HETATM 3 C CAE EJ4 . . . T 6 -7.716 -68.849 69.818 1 26.81 ? CAE EJ4 1219 A 1 HETATM 4 C CAF EJ4 . . . T 6 -6.752 -69.027 68.774 1 27.23 ? CAF EJ4 1219 A 1 HETATM 5 C CAG EJ4 . . . T 6 -5.52 -69.667 68.895 1 25.98 ? CAG EJ4 1219 A 1 HETATM 6 C CAH EJ4 . . . T 6 -4.856 -69.492 67.725 1 28.81 ? CAH EJ4 1219 A 1 HETATM 7 C CAI EJ4 . . . T 6 -3.616 -69.87 67.311 1 28.31 ? CAI EJ4 1219 A 1 HETATM 8 C CAJ EJ4 . . . T 6 -3.153 -69.57 66.021 1 29.81 ? CAJ EJ4 1219 A 1 HETATM 9 C CAK EJ4 . . . T 6 -3.978 -68.8 65.188 1 31.98 ? CAK EJ4 1219 A 1 HETATM 10 C CAL EJ4 . . . T 6 -5.235 -68.411 65.657 1 31.88 ? CAL EJ4 1219 A 1 HETATM 11 C CAM EJ4 . . . T 6 -5.631 -68.766 66.903 1 28.48 ? CAM EJ4 1219 A 1 HETATM 12 C CAO EJ4 . . . T 6 -5.089 -70.341 70.088 1 26.89 ? CAO EJ4 1219 A 1 HETATM 13 C CAP EJ4 . . . T 6 -6.231 -70.597 71.088 1 26.78 ? CAP EJ4 1219 A 1 HETATM 14 C CAR EJ4 . . . T 6 -5.738 -70.835 72.504 1 23.86 ? CAR EJ4 1219 A 1 HETATM 15 C CAT EJ4 . . . T 6 -7.876 -70.215 73.465 1 24.02 ? CAT EJ4 1219 A 1 HETATM 16 C CAU EJ4 . . . T 6 -8.334 -69.694 72.147 1 24.7 ? CAU EJ4 1219 A 1 HETATM 17 C CAV EJ4 . . . T 6 -7.199 -69.351 71.161 1 25.24 ? CAV EJ4 1219 A 1 HETATM 18 C CAW EJ4 . . . T 6 -6.449 -68.213 71.669 1 24.39 ? CAW EJ4 1219 A 1 HETATM 19 C CAX EJ4 . . . T 6 -5.466 -68.345 72.585 1 24.62 ? CAX EJ4 1219 A 1 HETATM 20 C CAY EJ4 . . . T 6 -4.812 -67.172 73.007 1 24.7 ? CAY EJ4 1219 A 1 HETATM 21 C CAZ EJ4 . . . T 6 -5.181 -65.918 72.46 1 24.35 ? CAZ EJ4 1219 A 1 HETATM 22 N NAN EJ4 . . . T 6 -6.766 -68.514 67.536 1 27.2 ? NAN EJ4 1219 A 1 HETATM 23 N NAS EJ4 . . . T 6 -6.89 -71.346 73.355 1 22.82 ? NAS EJ4 1219 A 1 HETATM 24 O OAA EJ4 . . . T 6 -6.615 -64.677 70.925 1 24.56 ? OAA EJ4 1219 A 1 HETATM 25 O OAD EJ4 . . . T 6 -7.844 -67.26 70.154 1 28.55 ? OAD EJ4 1219 A 1 HETATM 26 O OAQ EJ4 . . . T 6 -6.965 -71.85 70.661 1 26.47 ? OAQ EJ4 1219 A 1 HETATM 27 C CBA EJ4 . . . T 6 -5.136 -69.639 73.082 1 24.28 ? CBA EJ4 1219 A 1 HETATM 28 C CBB EJ4 . . . T 6 -6.595 -71.876 74.7 1 23.2 ? CBB EJ4 1219 A 1 HETATM 29 C CBC EJ4 . . . T 6 -5.553 -73.017 74.613 1 24.97 ? CBC EJ4 1219 A 1 HETATM 30 C CBD EJ4 . . . T 6 -4.07 -72.716 74.922 1 25 ? CBD EJ4 1219 A 1 HETATM 31 C CBE EJ4 . . . T 6 -4.899 -73.452 75.953 1 24.12 ? CBE EJ4 1219 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #