data_4N6N # _model_server_result.job_id p1I3knFXKkewNuxXYy9NAA _model_server_result.datetime_utc '2024-11-26 12:15:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":404}' # _entry.id 4N6N # _exptl.entry_id 4N6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.63 _cell.angle_gamma 90 _cell.entry_id 4N6N _cell.length_a 44.61 _cell.length_b 85.75 _cell.length_c 58.95 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 C 1 NAG A 311 NAG 3 n C NAG 2 C 2 NAG A 312 NAG 3 n C BMA 3 C 3 BMA A 313 BMA 4 n D NAG 1 D 1 NAG A 503 NAG 4 n D NAG 2 D 2 NAG A 504 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 72 B CYS 73 1_555 B SG CYS 87 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 100 B CYS 101 1_555 B SG CYS 120 B CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A C THR 121 A THR 146 1_555 A N SNN 122 A SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale2 A C SNN 122 A SNN 147 1_555 A N HIS 123 A HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.293 ? covale ? covale3 A C5 SNN 122 A SNN 147 1_555 A N HIS 123 A HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.293 ? covale ? covale4 A ND2 ASN 142 A ASN 167 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale5 A C ALA 163 A ALA 188 1_555 A N SCH 164 A SCH 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C SCH 164 A SCH 189 1_555 A N GLU 165 A GLU 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A ND2 ASN 247 A ASN 272 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale8 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale9 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale10 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4N6N _atom_sites.fract_transf_matrix[1][1] 0.022416 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001815 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 IOD A 1 401 300 IOD IOD . F 5 IOD A 1 402 301 IOD IOD . G 5 IOD A 1 403 302 IOD IOD . H 5 IOD A 1 404 303 IOD IOD . I 5 IOD A 1 405 304 IOD IOD . J 6 HOH A 1 501 300 HOH HOH . J 6 HOH A 2 502 301 HOH HOH . J 6 HOH A 3 503 303 HOH HOH . J 6 HOH A 4 504 305 HOH HOH . J 6 HOH A 5 505 306 HOH HOH . J 6 HOH A 6 506 307 HOH HOH . J 6 HOH A 7 507 308 HOH HOH . J 6 HOH A 8 508 310 HOH HOH . J 6 HOH A 9 509 311 HOH HOH . J 6 HOH A 10 510 312 HOH HOH . J 6 HOH A 11 511 315 HOH HOH . J 6 HOH A 12 512 316 HOH HOH . J 6 HOH A 13 513 317 HOH HOH . J 6 HOH A 14 514 318 HOH HOH . J 6 HOH A 15 515 320 HOH HOH . J 6 HOH A 16 516 321 HOH HOH . J 6 HOH A 17 517 322 HOH HOH . J 6 HOH A 18 518 324 HOH HOH . J 6 HOH A 19 519 325 HOH HOH . J 6 HOH A 20 520 326 HOH HOH . J 6 HOH A 21 521 327 HOH HOH . J 6 HOH A 22 522 328 HOH HOH . J 6 HOH A 23 523 330 HOH HOH . J 6 HOH A 24 524 334 HOH HOH . J 6 HOH A 25 525 336 HOH HOH . J 6 HOH A 26 526 337 HOH HOH . J 6 HOH A 27 527 340 HOH HOH . J 6 HOH A 28 528 341 HOH HOH . J 6 HOH A 29 529 342 HOH HOH . J 6 HOH A 30 530 343 HOH HOH . J 6 HOH A 31 531 344 HOH HOH . J 6 HOH A 32 532 345 HOH HOH . J 6 HOH A 33 533 347 HOH HOH . J 6 HOH A 34 534 348 HOH HOH . J 6 HOH A 35 535 350 HOH HOH . J 6 HOH A 36 536 351 HOH HOH . J 6 HOH A 37 537 352 HOH HOH . J 6 HOH A 38 538 353 HOH HOH . J 6 HOH A 39 539 354 HOH HOH . J 6 HOH A 40 540 355 HOH HOH . J 6 HOH A 41 541 359 HOH HOH . J 6 HOH A 42 542 360 HOH HOH . J 6 HOH A 43 543 361 HOH HOH . J 6 HOH A 44 544 362 HOH HOH . J 6 HOH A 45 545 363 HOH HOH . J 6 HOH A 46 546 364 HOH HOH . J 6 HOH A 47 547 366 HOH HOH . J 6 HOH A 48 548 368 HOH HOH . J 6 HOH A 49 549 369 HOH HOH . J 6 HOH A 50 550 370 HOH HOH . J 6 HOH A 51 551 371 HOH HOH . J 6 HOH A 52 552 372 HOH HOH . J 6 HOH A 53 553 374 HOH HOH . J 6 HOH A 54 554 377 HOH HOH . J 6 HOH A 55 555 381 HOH HOH . J 6 HOH A 56 556 382 HOH HOH . J 6 HOH A 57 557 384 HOH HOH . J 6 HOH A 58 558 385 HOH HOH . J 6 HOH A 59 559 386 HOH HOH . J 6 HOH A 60 560 387 HOH HOH . J 6 HOH A 61 561 388 HOH HOH . J 6 HOH A 62 562 389 HOH HOH . J 6 HOH A 63 563 390 HOH HOH . J 6 HOH A 64 564 391 HOH HOH . J 6 HOH A 65 565 392 HOH HOH . J 6 HOH A 66 566 393 HOH HOH . J 6 HOH A 67 567 395 HOH HOH . J 6 HOH A 68 568 396 HOH HOH . J 6 HOH A 69 569 397 HOH HOH . J 6 HOH A 70 570 398 HOH HOH . J 6 HOH A 71 571 400 HOH HOH . J 6 HOH A 72 572 403 HOH HOH . J 6 HOH A 73 573 404 HOH HOH . J 6 HOH A 74 574 405 HOH HOH . J 6 HOH A 75 575 407 HOH HOH . J 6 HOH A 76 576 408 HOH HOH . J 6 HOH A 77 577 410 HOH HOH . J 6 HOH A 78 578 411 HOH HOH . J 6 HOH A 79 579 413 HOH HOH . J 6 HOH A 80 580 414 HOH HOH . J 6 HOH A 81 581 415 HOH HOH . J 6 HOH A 82 582 418 HOH HOH . J 6 HOH A 83 583 419 HOH HOH . J 6 HOH A 84 584 421 HOH HOH . J 6 HOH A 85 585 423 HOH HOH . J 6 HOH A 86 586 424 HOH HOH . J 6 HOH A 87 587 429 HOH HOH . J 6 HOH A 88 588 431 HOH HOH . J 6 HOH A 89 589 432 HOH HOH . J 6 HOH A 90 590 433 HOH HOH . J 6 HOH A 91 591 434 HOH HOH . J 6 HOH A 92 592 435 HOH HOH . J 6 HOH A 93 593 436 HOH HOH . J 6 HOH A 94 594 437 HOH HOH . J 6 HOH A 95 595 438 HOH HOH . J 6 HOH A 96 596 439 HOH HOH . J 6 HOH A 97 597 440 HOH HOH . J 6 HOH A 98 598 442 HOH HOH . J 6 HOH A 99 599 444 HOH HOH . J 6 HOH A 100 600 445 HOH HOH . J 6 HOH A 101 601 446 HOH HOH . J 6 HOH A 102 602 447 HOH HOH . J 6 HOH A 103 603 448 HOH HOH . J 6 HOH A 104 604 450 HOH HOH . J 6 HOH A 105 605 452 HOH HOH . J 6 HOH A 106 606 453 HOH HOH . J 6 HOH A 107 607 455 HOH HOH . J 6 HOH A 108 608 456 HOH HOH . J 6 HOH A 109 609 457 HOH HOH . J 6 HOH A 110 610 464 HOH HOH . J 6 HOH A 111 611 466 HOH HOH . J 6 HOH A 112 612 467 HOH HOH . J 6 HOH A 113 613 469 HOH HOH . J 6 HOH A 114 614 470 HOH HOH . J 6 HOH A 115 615 471 HOH HOH . J 6 HOH A 116 616 473 HOH HOH . J 6 HOH A 117 617 474 HOH HOH . J 6 HOH A 118 618 477 HOH HOH . J 6 HOH A 119 619 478 HOH HOH . J 6 HOH A 120 620 479 HOH HOH . J 6 HOH A 121 621 480 HOH HOH . J 6 HOH A 122 622 481 HOH HOH . J 6 HOH A 123 623 483 HOH HOH . J 6 HOH A 124 624 484 HOH HOH . J 6 HOH A 125 625 485 HOH HOH . J 6 HOH A 126 626 486 HOH HOH . J 6 HOH A 127 627 487 HOH HOH . J 6 HOH A 128 628 488 HOH HOH . J 6 HOH A 129 629 490 HOH HOH . J 6 HOH A 130 630 491 HOH HOH . J 6 HOH A 131 631 494 HOH HOH . J 6 HOH A 132 632 495 HOH HOH . J 6 HOH A 133 633 496 HOH HOH . J 6 HOH A 134 634 498 HOH HOH . J 6 HOH A 135 635 499 HOH HOH . J 6 HOH A 136 636 500 HOH HOH . J 6 HOH A 137 637 501 HOH HOH . J 6 HOH A 138 638 502 HOH HOH . J 6 HOH A 139 639 503 HOH HOH . J 6 HOH A 140 640 506 HOH HOH . J 6 HOH A 141 641 508 HOH HOH . J 6 HOH A 142 642 509 HOH HOH . J 6 HOH A 143 643 510 HOH HOH . J 6 HOH A 144 644 511 HOH HOH . J 6 HOH A 145 645 512 HOH HOH . J 6 HOH A 146 646 514 HOH HOH . J 6 HOH A 147 647 516 HOH HOH . J 6 HOH A 148 648 517 HOH HOH . J 6 HOH A 149 649 519 HOH HOH . J 6 HOH A 150 650 521 HOH HOH . J 6 HOH A 151 651 522 HOH HOH . J 6 HOH A 152 652 523 HOH HOH . J 6 HOH A 153 653 524 HOH HOH . J 6 HOH A 154 654 525 HOH HOH . J 6 HOH A 155 655 526 HOH HOH . J 6 HOH A 156 656 527 HOH HOH . J 6 HOH A 157 657 528 HOH HOH . J 6 HOH A 158 658 531 HOH HOH . J 6 HOH A 159 659 532 HOH HOH . J 6 HOH A 160 660 534 HOH HOH . J 6 HOH A 161 661 535 HOH HOH . J 6 HOH A 162 662 536 HOH HOH . J 6 HOH A 163 663 539 HOH HOH . J 6 HOH A 164 664 540 HOH HOH . J 6 HOH A 165 665 541 HOH HOH . J 6 HOH A 166 666 542 HOH HOH . J 6 HOH A 167 667 543 HOH HOH . K 6 HOH B 1 201 302 HOH HOH . K 6 HOH B 2 202 304 HOH HOH . K 6 HOH B 3 203 309 HOH HOH . K 6 HOH B 4 204 313 HOH HOH . K 6 HOH B 5 205 314 HOH HOH . K 6 HOH B 6 206 319 HOH HOH . K 6 HOH B 7 207 323 HOH HOH . K 6 HOH B 8 208 329 HOH HOH . K 6 HOH B 9 209 331 HOH HOH . K 6 HOH B 10 210 332 HOH HOH . K 6 HOH B 11 211 333 HOH HOH . K 6 HOH B 12 212 335 HOH HOH . K 6 HOH B 13 213 338 HOH HOH . K 6 HOH B 14 214 339 HOH HOH . K 6 HOH B 15 215 346 HOH HOH . K 6 HOH B 16 216 349 HOH HOH . K 6 HOH B 17 217 356 HOH HOH . K 6 HOH B 18 218 357 HOH HOH . K 6 HOH B 19 219 358 HOH HOH . K 6 HOH B 20 220 365 HOH HOH . K 6 HOH B 21 221 367 HOH HOH . K 6 HOH B 22 222 373 HOH HOH . K 6 HOH B 23 223 375 HOH HOH . K 6 HOH B 24 224 376 HOH HOH . K 6 HOH B 25 225 378 HOH HOH . K 6 HOH B 26 226 379 HOH HOH . K 6 HOH B 27 227 380 HOH HOH . K 6 HOH B 28 228 383 HOH HOH . K 6 HOH B 29 229 394 HOH HOH . K 6 HOH B 30 230 399 HOH HOH . K 6 HOH B 31 231 401 HOH HOH . K 6 HOH B 32 232 402 HOH HOH . K 6 HOH B 33 233 406 HOH HOH . K 6 HOH B 34 234 409 HOH HOH . K 6 HOH B 35 235 412 HOH HOH . K 6 HOH B 36 236 416 HOH HOH . K 6 HOH B 37 237 417 HOH HOH . K 6 HOH B 38 238 420 HOH HOH . K 6 HOH B 39 239 422 HOH HOH . K 6 HOH B 40 240 425 HOH HOH . K 6 HOH B 41 241 426 HOH HOH . K 6 HOH B 42 242 427 HOH HOH . K 6 HOH B 43 243 428 HOH HOH . K 6 HOH B 44 244 430 HOH HOH . K 6 HOH B 45 245 441 HOH HOH . K 6 HOH B 46 246 443 HOH HOH . K 6 HOH B 47 247 449 HOH HOH . K 6 HOH B 48 248 451 HOH HOH . K 6 HOH B 49 249 454 HOH HOH . K 6 HOH B 50 250 458 HOH HOH . K 6 HOH B 51 251 459 HOH HOH . K 6 HOH B 52 252 460 HOH HOH . K 6 HOH B 53 253 461 HOH HOH . K 6 HOH B 54 254 462 HOH HOH . K 6 HOH B 55 255 463 HOH HOH . K 6 HOH B 56 256 465 HOH HOH . K 6 HOH B 57 257 468 HOH HOH . K 6 HOH B 58 258 472 HOH HOH . K 6 HOH B 59 259 475 HOH HOH . K 6 HOH B 60 260 476 HOH HOH . K 6 HOH B 61 261 482 HOH HOH . K 6 HOH B 62 262 489 HOH HOH . K 6 HOH B 63 263 492 HOH HOH . K 6 HOH B 64 264 493 HOH HOH . K 6 HOH B 65 265 497 HOH HOH . K 6 HOH B 66 266 504 HOH HOH . K 6 HOH B 67 267 505 HOH HOH . K 6 HOH B 68 268 507 HOH HOH . K 6 HOH B 69 269 513 HOH HOH . K 6 HOH B 70 270 515 HOH HOH . K 6 HOH B 71 271 518 HOH HOH . K 6 HOH B 72 272 520 HOH HOH . K 6 HOH B 73 273 529 HOH HOH . K 6 HOH B 74 274 530 HOH HOH . K 6 HOH B 75 275 533 HOH HOH . K 6 HOH B 76 276 537 HOH HOH . K 6 HOH B 77 277 538 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x -4.881 _atom_site.Cartn_y 10.011 _atom_site.Cartn_z 9.865 _atom_site.occupancy 0.7 _atom_site.B_iso_or_equiv 34.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #