data_4N7W # _model_server_result.job_id KOjxcg2Md1EKSwCOu-FnJw _model_server_result.datetime_utc '2024-11-24 23:39:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4N7W # _exptl.entry_id 4N7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.68 _cell.angle_gamma 90 _cell.entry_id 4N7W _cell.length_a 189.406 _cell.length_b 46.223 _cell.length_c 70.357 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id MPG _chem_comp.mon_nstd_flag . _chem_comp.name '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 MPG sing 257 n n C2 C1 MPG sing 258 n n C3 C4 MPG sing 259 n n C4 C5 MPG sing 260 n n C5 C6 MPG sing 261 n n C6 C7 MPG sing 262 n n C7 C8 MPG sing 263 n n C8 C9 MPG sing 264 n n C9 C10 MPG doub 265 z n C10 C11 MPG sing 266 n n C11 C12 MPG sing 267 n n C12 C13 MPG sing 268 n n C13 C14 MPG sing 269 n n C14 C15 MPG sing 270 n n C15 C16 MPG sing 271 n n C16 C17 MPG sing 272 n n C17 C18 MPG sing 273 n n O1 C1 MPG sing 274 n n O1 CX3 MPG sing 275 n n CXD O2 MPG sing 276 n n CXD C21 MPG sing 277 n n CXD CX3 MPG sing 278 n n C21 O3 MPG sing 279 n n C2 H21C MPG sing 280 n n C2 H22C MPG sing 281 n n C3 H31C MPG sing 282 n n C3 H32C MPG sing 283 n n CX3 O4 MPG doub 284 n n C4 H41C MPG sing 285 n n C4 H42C MPG sing 286 n n C5 H51C MPG sing 287 n n C5 H52C MPG sing 288 n n C6 H61C MPG sing 289 n n C6 H62C MPG sing 290 n n C7 H71C MPG sing 291 n n C7 H72C MPG sing 292 n n C8 H81C MPG sing 293 n n C8 H82C MPG sing 294 n n C9 H9 MPG sing 295 n n C10 H10 MPG sing 296 n n C11 H111 MPG sing 297 n n C11 H112 MPG sing 298 n n C12 H121 MPG sing 299 n n C12 H122 MPG sing 300 n n C13 H131 MPG sing 301 n n C13 H132 MPG sing 302 n n C14 H141 MPG sing 303 n n C14 H142 MPG sing 304 n n C15 H151 MPG sing 305 n n C15 H152 MPG sing 306 n n C16 H161 MPG sing 307 n n C16 H162 MPG sing 308 n n C17 H171 MPG sing 309 n n C17 H172 MPG sing 310 n n C18 H181 MPG sing 311 n n C18 H182 MPG sing 312 n n C18 H183 MPG sing 313 n n C1 HX31 MPG sing 314 n n C1 HX32 MPG sing 315 n n CXD HXD MPG sing 316 n n O2 H2 MPG sing 317 n n C21 H211 MPG sing 318 n n C21 H212 MPG sing 319 n n O3 H3 MPG sing 320 n n # _atom_sites.entry_id 4N7W _atom_sites.fract_transf_matrix[1][1] 0.00528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000996 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 401 1 CIT CIT . D 3 MPG A 1 402 1 MPG MPG . E 2 CIT B 1 401 1 CIT CIT . F 3 MPG B 1 402 1 MPG MPG . G 4 HOH A 1 501 1 HOH HOH . G 4 HOH A 2 502 2 HOH HOH . G 4 HOH A 3 503 3 HOH HOH . G 4 HOH A 4 504 4 HOH HOH . G 4 HOH A 5 505 5 HOH HOH . G 4 HOH A 6 506 6 HOH HOH . G 4 HOH A 7 507 7 HOH HOH . G 4 HOH A 8 508 8 HOH HOH . G 4 HOH A 9 509 9 HOH HOH . G 4 HOH A 10 510 10 HOH HOH . G 4 HOH A 11 511 11 HOH HOH . G 4 HOH A 12 512 12 HOH HOH . G 4 HOH A 13 513 13 HOH HOH . G 4 HOH A 14 514 29 HOH HOH . G 4 HOH A 15 515 30 HOH HOH . G 4 HOH A 16 516 31 HOH HOH . G 4 HOH A 17 517 32 HOH HOH . G 4 HOH A 18 518 33 HOH HOH . G 4 HOH A 19 519 34 HOH HOH . G 4 HOH A 20 520 35 HOH HOH . G 4 HOH A 21 521 36 HOH HOH . G 4 HOH A 22 522 40 HOH HOH . G 4 HOH A 23 523 41 HOH HOH . G 4 HOH A 24 524 42 HOH HOH . G 4 HOH A 25 525 43 HOH HOH . G 4 HOH A 26 526 44 HOH HOH . G 4 HOH A 27 527 47 HOH HOH . G 4 HOH A 28 528 48 HOH HOH . G 4 HOH A 29 529 49 HOH HOH . G 4 HOH A 30 530 50 HOH HOH . G 4 HOH A 31 531 51 HOH HOH . G 4 HOH A 32 532 52 HOH HOH . G 4 HOH A 33 533 53 HOH HOH . G 4 HOH A 34 534 54 HOH HOH . G 4 HOH A 35 535 56 HOH HOH . G 4 HOH A 36 536 61 HOH HOH . G 4 HOH A 37 537 62 HOH HOH . G 4 HOH A 38 538 64 HOH HOH . G 4 HOH A 39 539 66 HOH HOH . G 4 HOH A 40 540 67 HOH HOH . G 4 HOH A 41 541 68 HOH HOH . G 4 HOH A 42 542 69 HOH HOH . G 4 HOH A 43 543 70 HOH HOH . G 4 HOH A 44 544 71 HOH HOH . G 4 HOH A 45 545 72 HOH HOH . G 4 HOH A 46 546 73 HOH HOH . G 4 HOH A 47 547 74 HOH HOH . G 4 HOH A 48 548 75 HOH HOH . G 4 HOH A 49 549 76 HOH HOH . G 4 HOH A 50 550 77 HOH HOH . G 4 HOH A 51 551 78 HOH HOH . G 4 HOH A 52 552 79 HOH HOH . G 4 HOH A 53 553 80 HOH HOH . G 4 HOH A 54 554 96 HOH HOH . G 4 HOH A 55 555 97 HOH HOH . G 4 HOH A 56 556 98 HOH HOH . G 4 HOH A 57 557 99 HOH HOH . G 4 HOH A 58 558 100 HOH HOH . G 4 HOH A 59 559 101 HOH HOH . G 4 HOH A 60 560 111 HOH HOH . G 4 HOH A 61 561 112 HOH HOH . G 4 HOH A 62 562 113 HOH HOH . G 4 HOH A 63 563 116 HOH HOH . G 4 HOH A 64 564 117 HOH HOH . G 4 HOH A 65 565 118 HOH HOH . G 4 HOH A 66 566 119 HOH HOH . G 4 HOH A 67 567 120 HOH HOH . G 4 HOH A 68 568 121 HOH HOH . G 4 HOH A 69 569 122 HOH HOH . G 4 HOH A 70 570 123 HOH HOH . G 4 HOH A 71 571 124 HOH HOH . G 4 HOH A 72 572 125 HOH HOH . G 4 HOH A 73 573 126 HOH HOH . G 4 HOH A 74 574 127 HOH HOH . G 4 HOH A 75 575 128 HOH HOH . G 4 HOH A 76 576 129 HOH HOH . G 4 HOH A 77 577 130 HOH HOH . G 4 HOH A 78 578 149 HOH HOH . G 4 HOH A 79 579 150 HOH HOH . G 4 HOH A 80 580 151 HOH HOH . H 4 HOH B 1 501 14 HOH HOH . H 4 HOH B 2 502 15 HOH HOH . H 4 HOH B 3 503 16 HOH HOH . H 4 HOH B 4 504 17 HOH HOH . H 4 HOH B 5 505 18 HOH HOH . H 4 HOH B 6 506 19 HOH HOH . H 4 HOH B 7 507 20 HOH HOH . H 4 HOH B 8 508 21 HOH HOH . H 4 HOH B 9 509 22 HOH HOH . H 4 HOH B 10 510 23 HOH HOH . H 4 HOH B 11 511 25 HOH HOH . H 4 HOH B 12 512 26 HOH HOH . H 4 HOH B 13 513 27 HOH HOH . H 4 HOH B 14 514 28 HOH HOH . H 4 HOH B 15 515 37 HOH HOH . H 4 HOH B 16 516 38 HOH HOH . H 4 HOH B 17 517 39 HOH HOH . H 4 HOH B 18 518 45 HOH HOH . H 4 HOH B 19 519 46 HOH HOH . H 4 HOH B 20 520 57 HOH HOH . H 4 HOH B 21 521 58 HOH HOH . H 4 HOH B 22 522 59 HOH HOH . H 4 HOH B 23 523 60 HOH HOH . H 4 HOH B 24 524 81 HOH HOH . H 4 HOH B 25 525 83 HOH HOH . H 4 HOH B 26 526 84 HOH HOH . H 4 HOH B 27 527 85 HOH HOH . H 4 HOH B 28 528 86 HOH HOH . H 4 HOH B 29 529 87 HOH HOH . H 4 HOH B 30 530 88 HOH HOH . H 4 HOH B 31 531 89 HOH HOH . H 4 HOH B 32 532 90 HOH HOH . H 4 HOH B 33 533 91 HOH HOH . H 4 HOH B 34 534 92 HOH HOH . H 4 HOH B 35 535 93 HOH HOH . H 4 HOH B 36 536 94 HOH HOH . H 4 HOH B 37 537 95 HOH HOH . H 4 HOH B 38 538 102 HOH HOH . H 4 HOH B 39 539 103 HOH HOH . H 4 HOH B 40 540 104 HOH HOH . H 4 HOH B 41 541 105 HOH HOH . H 4 HOH B 42 542 106 HOH HOH . H 4 HOH B 43 543 107 HOH HOH . H 4 HOH B 44 544 108 HOH HOH . H 4 HOH B 45 545 109 HOH HOH . H 4 HOH B 46 546 110 HOH HOH . H 4 HOH B 47 547 131 HOH HOH . H 4 HOH B 48 548 132 HOH HOH . H 4 HOH B 49 549 133 HOH HOH . H 4 HOH B 50 550 134 HOH HOH . H 4 HOH B 51 551 135 HOH HOH . H 4 HOH B 52 552 136 HOH HOH . H 4 HOH B 53 553 137 HOH HOH . H 4 HOH B 54 554 138 HOH HOH . H 4 HOH B 55 555 139 HOH HOH . H 4 HOH B 56 556 140 HOH HOH . H 4 HOH B 57 557 142 HOH HOH . H 4 HOH B 58 558 143 HOH HOH . H 4 HOH B 59 559 144 HOH HOH . H 4 HOH B 60 560 145 HOH HOH . H 4 HOH B 61 561 146 HOH HOH . H 4 HOH B 62 562 147 HOH HOH . H 4 HOH B 63 563 152 HOH HOH . H 4 HOH B 64 564 153 HOH HOH . H 4 HOH B 65 565 154 HOH HOH . H 4 HOH B 66 566 155 HOH HOH . H 4 HOH B 67 567 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 MPG . . . D 3 -48.668 -16.52 41.684 1 63.36 ? C2 MPG 402 A 1 HETATM 2 C C3 MPG . . . D 3 -47.325 -17.085 41.261 1 64.15 ? C3 MPG 402 A 1 HETATM 3 C C4 MPG . . . D 3 -46.238 -16.136 41.74 1 64.58 ? C4 MPG 402 A 1 HETATM 4 C C5 MPG . . . D 3 -46.3 -14.821 40.973 1 63.79 ? C5 MPG 402 A 1 HETATM 5 C C6 MPG . . . D 3 -45.333 -14.849 39.797 1 64.02 ? C6 MPG 402 A 1 HETATM 6 C C7 MPG . . . D 3 -44.179 -13.875 39.999 1 64.48 ? C7 MPG 402 A 1 HETATM 7 C C8 MPG . . . D 3 -43.472 -14.081 41.334 1 65.85 ? C8 MPG 402 A 1 HETATM 8 C C9 MPG . . . D 3 -42.678 -15.366 41.33 1 66.64 ? C9 MPG 402 A 1 HETATM 9 C C10 MPG . . . D 3 -42.543 -16.093 42.441 1 67.26 ? C10 MPG 402 A 1 HETATM 10 C C11 MPG . . . D 3 -43.197 -15.674 43.739 1 66.65 ? C11 MPG 402 A 1 HETATM 11 C C12 MPG . . . D 3 -42.335 -16.068 44.936 1 65.47 ? C12 MPG 402 A 1 HETATM 12 C C13 MPG . . . D 3 -41.782 -17.486 44.841 1 64.74 ? C13 MPG 402 A 1 HETATM 13 C C14 MPG . . . D 3 -40.543 -17.636 45.726 1 63.62 ? C14 MPG 402 A 1 HETATM 14 C C15 MPG . . . D 3 -40.872 -17.453 47.208 1 60.92 ? C15 MPG 402 A 1 HETATM 15 C C16 MPG . . . D 3 -39.696 -16.876 47.987 1 57.59 ? C16 MPG 402 A 1 HETATM 16 C C17 MPG . . . D 3 -38.477 -17.788 47.935 1 56.05 ? C17 MPG 402 A 1 HETATM 17 C C18 MPG . . . D 3 -37.222 -17.037 48.327 1 54.27 ? C18 MPG 402 A 1 HETATM 18 O O1 MPG . . . D 3 -49.554 -18.76 41.677 1 62.35 ? O1 MPG 402 A 1 HETATM 19 C C1 MPG . . . D 3 -49.812 -17.426 41.26 1 63 ? C1 MPG 402 A 1 HETATM 20 C CXD MPG . . . D 3 -51.313 -20.594 41.966 1 61.62 ? CXD MPG 402 A 1 HETATM 21 O O2 MPG . . . D 3 -51.766 -21.43 43.041 1 62.35 ? O2 MPG 402 A 1 HETATM 22 C C21 MPG . . . D 3 -50.393 -21.374 41.04 1 60.19 ? C21 MPG 402 A 1 HETATM 23 O O3 MPG . . . D 3 -51.128 -22.035 40.002 1 57.52 ? O3 MPG 402 A 1 HETATM 24 O O4 MPG . . . D 3 -50.763 -18.995 43.623 1 65.24 ? O4 MPG 402 A 1 HETATM 25 C CX3 MPG . . . D 3 -50.549 -19.423 42.502 1 62.85 ? CX3 MPG 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #