data_4N86 # _model_server_result.job_id kOHrlBy4B-gKSKRUYXbuaA _model_server_result.datetime_utc '2024-11-18 18:29:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4n86 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4N86 # _exptl.entry_id 4N86 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4N86 _cell.length_a 42.829 _cell.length_b 84.582 _cell.length_c 65.265 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4N86 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -42.829 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 98 A GLU 66 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc2 A OD1 ASP 131 A ASP 99 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc3 A O ASP 131 A ASP 99 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4N86 _atom_sites.fract_transf_matrix[1][1] 0.023349 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GBJ A 1 201 999 GBJ GLA . D 3 CA A 1 202 1 CA CA . E 2 GBJ B 1 201 999 GBJ GLA . F 4 HOH A 1 301 1 HOH HOH . F 4 HOH A 2 302 2 HOH HOH . F 4 HOH A 3 303 3 HOH HOH . F 4 HOH A 4 304 5 HOH HOH . F 4 HOH A 5 305 11 HOH HOH . F 4 HOH A 6 306 12 HOH HOH . F 4 HOH A 7 307 15 HOH HOH . F 4 HOH A 8 308 16 HOH HOH . F 4 HOH A 9 309 17 HOH HOH . F 4 HOH A 10 310 18 HOH HOH . F 4 HOH A 11 311 19 HOH HOH . F 4 HOH A 12 312 22 HOH HOH . F 4 HOH A 13 313 23 HOH HOH . F 4 HOH A 14 314 27 HOH HOH . F 4 HOH A 15 315 30 HOH HOH . F 4 HOH A 16 316 31 HOH HOH . F 4 HOH A 17 317 32 HOH HOH . F 4 HOH A 18 318 33 HOH HOH . F 4 HOH A 19 319 35 HOH HOH . F 4 HOH A 20 320 37 HOH HOH . F 4 HOH A 21 321 40 HOH HOH . F 4 HOH A 22 322 41 HOH HOH . F 4 HOH A 23 323 45 HOH HOH . F 4 HOH A 24 324 47 HOH HOH . F 4 HOH A 25 325 50 HOH HOH . F 4 HOH A 26 326 51 HOH HOH . F 4 HOH A 27 327 52 HOH HOH . F 4 HOH A 28 328 53 HOH HOH . F 4 HOH A 29 329 54 HOH HOH . F 4 HOH A 30 330 56 HOH HOH . F 4 HOH A 31 331 62 HOH HOH . F 4 HOH A 32 332 63 HOH HOH . F 4 HOH A 33 333 64 HOH HOH . F 4 HOH A 34 334 65 HOH HOH . F 4 HOH A 35 335 68 HOH HOH . F 4 HOH A 36 336 69 HOH HOH . F 4 HOH A 37 337 70 HOH HOH . F 4 HOH A 38 338 72 HOH HOH . F 4 HOH A 39 339 73 HOH HOH . F 4 HOH A 40 340 74 HOH HOH . F 4 HOH A 41 341 75 HOH HOH . F 4 HOH A 42 342 76 HOH HOH . G 4 HOH B 1 301 4 HOH HOH . G 4 HOH B 2 302 6 HOH HOH . G 4 HOH B 3 303 7 HOH HOH . G 4 HOH B 4 304 8 HOH HOH . G 4 HOH B 5 305 9 HOH HOH . G 4 HOH B 6 306 10 HOH HOH . G 4 HOH B 7 307 13 HOH HOH . G 4 HOH B 8 308 14 HOH HOH . G 4 HOH B 9 309 20 HOH HOH . G 4 HOH B 10 310 21 HOH HOH . G 4 HOH B 11 311 24 HOH HOH . G 4 HOH B 12 312 25 HOH HOH . G 4 HOH B 13 313 26 HOH HOH . G 4 HOH B 14 314 28 HOH HOH . G 4 HOH B 15 315 29 HOH HOH . G 4 HOH B 16 316 34 HOH HOH . G 4 HOH B 17 317 36 HOH HOH . G 4 HOH B 18 318 38 HOH HOH . G 4 HOH B 19 319 39 HOH HOH . G 4 HOH B 20 320 42 HOH HOH . G 4 HOH B 21 321 43 HOH HOH . G 4 HOH B 22 322 44 HOH HOH . G 4 HOH B 23 323 46 HOH HOH . G 4 HOH B 24 324 48 HOH HOH . G 4 HOH B 25 325 49 HOH HOH . G 4 HOH B 26 326 55 HOH HOH . G 4 HOH B 27 327 57 HOH HOH . G 4 HOH B 28 328 58 HOH HOH . G 4 HOH B 29 329 59 HOH HOH . G 4 HOH B 30 330 60 HOH HOH . G 4 HOH B 31 331 61 HOH HOH . G 4 HOH B 32 332 66 HOH HOH . G 4 HOH B 33 333 67 HOH HOH . G 4 HOH B 34 334 71 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -42.986 _atom_site.Cartn_y 18.685 _atom_site.Cartn_z -4.553 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #