data_4N8S
#
_model_server_result.job_id            GohM6418p9GdwJChrMOfFQ 
_model_server_result.datetime_utc      '2024-11-30 10:28:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4n8s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":302}' 
#
_entry.id    4N8S 
#
_exptl.entry_id    4N8S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              151.119 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-nitrobenzaldehyde 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4N8S 
_cell.length_a            140.461 
_cell.length_b            140.461 
_cell.length_c            80.289 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4N8S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 268 A CYS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf2 A SG CYS 36 A CYS 36 1_555 A SG CYS 41 A CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf3 A SG CYS 104 A CYS 104 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 268 B CYS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf5 B SG CYS 36 B CYS 36 1_555 B SG CYS 41 B CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf6 B SG CYS 104 B CYS 104 1_555 B SG CYS 107 B CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? 
covale ? covale1 A ND2 ASN 33 A ASN 33 1_555 C C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? 
covale ? covale2 B ND2 ASN 33 B ASN 33 1_555 F C1 NAG . B NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? 
#
_chem_comp.formula           'C7 H5 N O3' 
_chem_comp.formula_weight    151.119 
_chem_comp.id                XXH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-nitrobenzaldehyde 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C5 XXH doub 418 n n 
C5 C4 XXH sing 419 n n 
C4 C6 XXH doub 420 n y 
C4 C3 XXH sing 421 n y 
C6 C7 XXH sing 422 n y 
C3 C2 XXH doub 423 n y 
C7 C1 XXH doub 424 n y 
C2 C1 XXH sing 425 n y 
C1 N1 XXH sing 426 n n 
N1 O1 XXH doub 427 n n 
N1 O2 XXH sing 428 n n 
C5 H1 XXH sing 429 n n 
C6 H2 XXH sing 430 n n 
C7 H3 XXH sing 431 n n 
C3 H4 XXH sing 432 n n 
C2 H5 XXH sing 433 n n 
#
_atom_sites.entry_id                     4N8S 
_atom_sites.fract_transf_matrix[1][1]    0.007119 
_atom_sites.fract_transf_matrix[1][2]    0.00411 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008221 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012455 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 301 301 NAG NAG . 
D 3 XXH A 1 302 308 XXH XXH . 
E 4 EAC A 1 303 301 EAC EAC . 
F 2 NAG B 1 301 301 NAG NAG . 
G 3 XXH B 1 302 307 XXH XXH . 
H 4 EAC B 1 303 302 EAC EAC . 
I 5 GOL B 1 304 304 GOL GOL . 
J 6 HOH A 1 401 1 HOH HOH . 
J 6 HOH A 2 402 5 HOH HOH . 
J 6 HOH A 3 403 9 HOH HOH . 
J 6 HOH A 4 404 14 HOH HOH . 
J 6 HOH A 5 405 15 HOH HOH . 
J 6 HOH A 6 406 21 HOH HOH . 
J 6 HOH A 7 407 26 HOH HOH . 
J 6 HOH A 8 408 28 HOH HOH . 
J 6 HOH A 9 409 30 HOH HOH . 
J 6 HOH A 10 410 34 HOH HOH . 
J 6 HOH A 11 411 36 HOH HOH . 
J 6 HOH A 12 412 38 HOH HOH . 
J 6 HOH A 13 413 39 HOH HOH . 
J 6 HOH A 14 414 40 HOH HOH . 
J 6 HOH A 15 415 45 HOH HOH . 
J 6 HOH A 16 416 46 HOH HOH . 
J 6 HOH A 17 417 47 HOH HOH . 
J 6 HOH A 18 418 49 HOH HOH . 
J 6 HOH A 19 419 50 HOH HOH . 
J 6 HOH A 20 420 53 HOH HOH . 
J 6 HOH A 21 421 54 HOH HOH . 
J 6 HOH A 22 422 56 HOH HOH . 
J 6 HOH A 23 423 59 HOH HOH . 
J 6 HOH A 24 424 62 HOH HOH . 
J 6 HOH A 25 425 63 HOH HOH . 
J 6 HOH A 26 426 65 HOH HOH . 
J 6 HOH A 27 427 68 HOH HOH . 
J 6 HOH A 28 428 72 HOH HOH . 
J 6 HOH A 29 429 73 HOH HOH . 
J 6 HOH A 30 430 76 HOH HOH . 
J 6 HOH A 31 431 77 HOH HOH . 
J 6 HOH A 32 432 78 HOH HOH . 
J 6 HOH A 33 433 81 HOH HOH . 
J 6 HOH A 34 434 83 HOH HOH . 
J 6 HOH A 35 435 85 HOH HOH . 
J 6 HOH A 36 436 88 HOH HOH . 
J 6 HOH A 37 437 93 HOH HOH . 
J 6 HOH A 38 438 98 HOH HOH . 
J 6 HOH A 39 439 101 HOH HOH . 
J 6 HOH A 40 440 102 HOH HOH . 
J 6 HOH A 41 441 103 HOH HOH . 
J 6 HOH A 42 442 114 HOH HOH . 
J 6 HOH A 43 443 115 HOH HOH . 
J 6 HOH A 44 444 125 HOH HOH . 
J 6 HOH A 45 445 135 HOH HOH . 
J 6 HOH A 46 446 136 HOH HOH . 
J 6 HOH A 47 447 137 HOH HOH . 
J 6 HOH A 48 448 138 HOH HOH . 
J 6 HOH A 49 449 139 HOH HOH . 
J 6 HOH A 50 450 140 HOH HOH . 
J 6 HOH A 51 451 141 HOH HOH . 
J 6 HOH A 52 452 142 HOH HOH . 
J 6 HOH A 53 453 143 HOH HOH . 
J 6 HOH A 54 454 144 HOH HOH . 
J 6 HOH A 55 455 151 HOH HOH . 
J 6 HOH A 56 456 152 HOH HOH . 
J 6 HOH A 57 457 153 HOH HOH . 
J 6 HOH A 58 458 154 HOH HOH . 
J 6 HOH A 59 459 155 HOH HOH . 
J 6 HOH A 60 460 157 HOH HOH . 
J 6 HOH A 61 461 158 HOH HOH . 
J 6 HOH A 62 462 159 HOH HOH . 
J 6 HOH A 63 463 160 HOH HOH . 
J 6 HOH A 64 464 161 HOH HOH . 
J 6 HOH A 65 465 162 HOH HOH . 
J 6 HOH A 66 466 163 HOH HOH . 
J 6 HOH A 67 467 164 HOH HOH . 
K 6 HOH B 1 401 2 HOH HOH . 
K 6 HOH B 2 402 3 HOH HOH . 
K 6 HOH B 3 403 4 HOH HOH . 
K 6 HOH B 4 404 6 HOH HOH . 
K 6 HOH B 5 405 7 HOH HOH . 
K 6 HOH B 6 406 8 HOH HOH . 
K 6 HOH B 7 407 10 HOH HOH . 
K 6 HOH B 8 408 11 HOH HOH . 
K 6 HOH B 9 409 13 HOH HOH . 
K 6 HOH B 10 410 16 HOH HOH . 
K 6 HOH B 11 411 17 HOH HOH . 
K 6 HOH B 12 412 18 HOH HOH . 
K 6 HOH B 13 413 19 HOH HOH . 
K 6 HOH B 14 414 20 HOH HOH . 
K 6 HOH B 15 415 22 HOH HOH . 
K 6 HOH B 16 416 23 HOH HOH . 
K 6 HOH B 17 417 24 HOH HOH . 
K 6 HOH B 18 418 25 HOH HOH . 
K 6 HOH B 19 419 27 HOH HOH . 
K 6 HOH B 20 420 29 HOH HOH . 
K 6 HOH B 21 421 31 HOH HOH . 
K 6 HOH B 22 422 32 HOH HOH . 
K 6 HOH B 23 423 33 HOH HOH . 
K 6 HOH B 24 424 35 HOH HOH . 
K 6 HOH B 25 425 37 HOH HOH . 
K 6 HOH B 26 426 41 HOH HOH . 
K 6 HOH B 27 427 42 HOH HOH . 
K 6 HOH B 28 428 43 HOH HOH . 
K 6 HOH B 29 429 44 HOH HOH . 
K 6 HOH B 30 430 48 HOH HOH . 
K 6 HOH B 31 431 51 HOH HOH . 
K 6 HOH B 32 432 52 HOH HOH . 
K 6 HOH B 33 433 55 HOH HOH . 
K 6 HOH B 34 434 57 HOH HOH . 
K 6 HOH B 35 435 58 HOH HOH . 
K 6 HOH B 36 436 60 HOH HOH . 
K 6 HOH B 37 437 61 HOH HOH . 
K 6 HOH B 38 438 64 HOH HOH . 
K 6 HOH B 39 439 66 HOH HOH . 
K 6 HOH B 40 440 67 HOH HOH . 
K 6 HOH B 41 441 69 HOH HOH . 
K 6 HOH B 42 442 70 HOH HOH . 
K 6 HOH B 43 443 74 HOH HOH . 
K 6 HOH B 44 444 75 HOH HOH . 
K 6 HOH B 45 445 79 HOH HOH . 
K 6 HOH B 46 446 80 HOH HOH . 
K 6 HOH B 47 447 82 HOH HOH . 
K 6 HOH B 48 448 84 HOH HOH . 
K 6 HOH B 49 449 86 HOH HOH . 
K 6 HOH B 50 450 87 HOH HOH . 
K 6 HOH B 51 451 89 HOH HOH . 
K 6 HOH B 52 452 91 HOH HOH . 
K 6 HOH B 53 453 92 HOH HOH . 
K 6 HOH B 54 454 94 HOH HOH . 
K 6 HOH B 55 455 95 HOH HOH . 
K 6 HOH B 56 456 96 HOH HOH . 
K 6 HOH B 57 457 97 HOH HOH . 
K 6 HOH B 58 458 99 HOH HOH . 
K 6 HOH B 59 459 100 HOH HOH . 
K 6 HOH B 60 460 110 HOH HOH . 
K 6 HOH B 61 461 111 HOH HOH . 
K 6 HOH B 62 462 112 HOH HOH . 
K 6 HOH B 63 463 113 HOH HOH . 
K 6 HOH B 64 464 116 HOH HOH . 
K 6 HOH B 65 465 117 HOH HOH . 
K 6 HOH B 66 466 118 HOH HOH . 
K 6 HOH B 67 467 119 HOH HOH . 
K 6 HOH B 68 468 120 HOH HOH . 
K 6 HOH B 69 469 121 HOH HOH . 
K 6 HOH B 70 470 122 HOH HOH . 
K 6 HOH B 71 471 123 HOH HOH . 
K 6 HOH B 72 472 124 HOH HOH . 
K 6 HOH B 73 473 126 HOH HOH . 
K 6 HOH B 74 474 127 HOH HOH . 
K 6 HOH B 75 475 128 HOH HOH . 
K 6 HOH B 76 476 129 HOH HOH . 
K 6 HOH B 77 477 130 HOH HOH . 
K 6 HOH B 78 478 132 HOH HOH . 
K 6 HOH B 79 479 133 HOH HOH . 
K 6 HOH B 80 480 134 HOH HOH . 
K 6 HOH B 81 481 156 HOH HOH . 
K 6 HOH B 82 482 165 HOH HOH . 
K 6 HOH B 83 483 166 HOH HOH . 
K 6 HOH B 84 484 167 HOH HOH . 
K 6 HOH B 85 485 168 HOH HOH . 
K 6 HOH B 86 486 169 HOH HOH . 
K 6 HOH B 87 487 170 HOH HOH . 
K 6 HOH B 88 488 171 HOH HOH . 
K 6 HOH B 89 489 172 HOH HOH . 
K 6 HOH B 90 490 173 HOH HOH . 
K 6 HOH B 91 491 174 HOH HOH . 
K 6 HOH B 92 492 175 HOH HOH . 
K 6 HOH B 93 493 176 HOH HOH . 
K 6 HOH B 94 494 177 HOH HOH . 
K 6 HOH B 95 495 178 HOH HOH . 
K 6 HOH B 96 496 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 XXH . . . G 3 64.603 0.489 -15.877 0.8 51.48 ? O3 XXH 302 B 1 
HETATM 2 C C4 XXH . . . G 3 66.066 -0.8 -17.258 0.8 41.61 ? C4 XXH 302 B 1 
HETATM 3 C C5 XXH . . . G 3 65.788 0.206 -16.201 0.8 53.79 ? C5 XXH 302 B 1 
HETATM 4 C C6 XXH . . . G 3 65.035 -1.297 -18.023 0.8 49.22 ? C6 XXH 302 B 1 
HETATM 5 N N1 XXH . . . G 3 66.682 -3.896 -20.131 0.8 58.5 ? N1 XXH 302 B 1 
HETATM 6 C C7 XXH . . . G 3 65.213 -2.336 -18.958 0.8 40.42 ? C7 XXH 302 B 1 
HETATM 7 C C3 XXH . . . G 3 67.289 -1.398 -17.398 0.8 41.9 ? C3 XXH 302 B 1 
HETATM 8 C C2 XXH . . . G 3 67.498 -2.391 -18.372 0.8 42.16 ? C2 XXH 302 B 1 
HETATM 9 C C1 XXH . . . G 3 66.462 -2.868 -19.162 0.8 43.15 ? C1 XXH 302 B 1 
HETATM 10 O O1 XXH . . . G 3 67.861 -4.153 -20.433 0.8 55.57 ? O1 XXH 302 B 1 
HETATM 11 O O2 XXH . . . G 3 65.744 -4.576 -20.697 0.8 62.8 ? O2 XXH 302 B 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           383 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           11 
#