data_4NB0
#
_model_server_result.job_id            Lg7gveLj0dwS74CaPnyrJw 
_model_server_result.datetime_utc      '2025-02-28 03:28:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nb0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":204}' 
#
_entry.id    4NB0 
#
_exptl.entry_id    4NB0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         110.91 
_cell.angle_beta          115.24 
_cell.angle_gamma         98.27 
_cell.entry_id            4NB0 
_cell.length_a            40.931 
_cell.length_b            44.882 
_cell.length_c            46.866 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NB0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             15 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              9 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              203 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.162 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4NB0 
_atom_sites.fract_transf_matrix[1][1]    0.024431 
_atom_sites.fract_transf_matrix[1][2]    0.003552 
_atom_sites.fract_transf_matrix[1][3]    0.014907 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022515 
_atom_sites.fract_transf_matrix[2][3]    0.011902 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026684 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 B 1 201 1 SO4 SO4 . 
D 3 CYS B 1 202 1 CYS CYS . 
E 3 CYS B 1 203 1 CYS CYS . 
F 4 GOL B 1 204 1 GOL GOL . 
G 5 HOH A 1 201 1 HOH HOH . 
G 5 HOH A 2 202 4 HOH HOH . 
G 5 HOH A 3 203 6 HOH HOH . 
G 5 HOH A 4 204 7 HOH HOH . 
G 5 HOH A 5 205 12 HOH HOH . 
G 5 HOH A 6 206 14 HOH HOH . 
G 5 HOH A 7 207 15 HOH HOH . 
G 5 HOH A 8 208 16 HOH HOH . 
G 5 HOH A 9 209 17 HOH HOH . 
G 5 HOH A 10 210 18 HOH HOH . 
G 5 HOH A 11 211 19 HOH HOH . 
G 5 HOH A 12 212 21 HOH HOH . 
G 5 HOH A 13 213 24 HOH HOH . 
G 5 HOH A 14 214 29 HOH HOH . 
G 5 HOH A 15 215 30 HOH HOH . 
G 5 HOH A 16 216 32 HOH HOH . 
G 5 HOH A 17 217 33 HOH HOH . 
G 5 HOH A 18 218 36 HOH HOH . 
G 5 HOH A 19 219 40 HOH HOH . 
G 5 HOH A 20 220 42 HOH HOH . 
G 5 HOH A 21 221 44 HOH HOH . 
G 5 HOH A 22 222 46 HOH HOH . 
G 5 HOH A 23 223 47 HOH HOH . 
G 5 HOH A 24 224 49 HOH HOH . 
G 5 HOH A 25 225 50 HOH HOH . 
G 5 HOH A 26 226 51 HOH HOH . 
G 5 HOH A 27 227 54 HOH HOH . 
G 5 HOH A 28 228 55 HOH HOH . 
G 5 HOH A 29 229 56 HOH HOH . 
G 5 HOH A 30 230 63 HOH HOH . 
G 5 HOH A 31 231 66 HOH HOH . 
G 5 HOH A 32 232 67 HOH HOH . 
G 5 HOH A 33 233 68 HOH HOH . 
G 5 HOH A 34 234 70 HOH HOH . 
G 5 HOH A 35 235 73 HOH HOH . 
G 5 HOH A 36 236 80 HOH HOH . 
G 5 HOH A 37 237 81 HOH HOH . 
G 5 HOH A 38 238 82 HOH HOH . 
G 5 HOH A 39 239 83 HOH HOH . 
G 5 HOH A 40 240 87 HOH HOH . 
G 5 HOH A 41 241 88 HOH HOH . 
G 5 HOH A 42 242 92 HOH HOH . 
G 5 HOH A 43 243 93 HOH HOH . 
G 5 HOH A 44 244 94 HOH HOH . 
G 5 HOH A 45 245 95 HOH HOH . 
G 5 HOH A 46 246 96 HOH HOH . 
G 5 HOH A 47 247 97 HOH HOH . 
G 5 HOH A 48 248 98 HOH HOH . 
G 5 HOH A 49 249 99 HOH HOH . 
G 5 HOH A 50 250 100 HOH HOH . 
G 5 HOH A 51 251 101 HOH HOH . 
G 5 HOH A 52 252 108 HOH HOH . 
G 5 HOH A 53 253 109 HOH HOH . 
G 5 HOH A 54 254 110 HOH HOH . 
G 5 HOH A 55 255 111 HOH HOH . 
G 5 HOH A 56 256 112 HOH HOH . 
H 5 HOH B 1 301 2 HOH HOH . 
H 5 HOH B 2 302 3 HOH HOH . 
H 5 HOH B 3 303 5 HOH HOH . 
H 5 HOH B 4 304 8 HOH HOH . 
H 5 HOH B 5 305 9 HOH HOH . 
H 5 HOH B 6 306 10 HOH HOH . 
H 5 HOH B 7 307 11 HOH HOH . 
H 5 HOH B 8 308 13 HOH HOH . 
H 5 HOH B 9 309 20 HOH HOH . 
H 5 HOH B 10 310 22 HOH HOH . 
H 5 HOH B 11 311 23 HOH HOH . 
H 5 HOH B 12 312 25 HOH HOH . 
H 5 HOH B 13 313 26 HOH HOH . 
H 5 HOH B 14 314 27 HOH HOH . 
H 5 HOH B 15 315 28 HOH HOH . 
H 5 HOH B 16 316 31 HOH HOH . 
H 5 HOH B 17 317 34 HOH HOH . 
H 5 HOH B 18 318 35 HOH HOH . 
H 5 HOH B 19 319 37 HOH HOH . 
H 5 HOH B 20 320 38 HOH HOH . 
H 5 HOH B 21 321 39 HOH HOH . 
H 5 HOH B 22 322 41 HOH HOH . 
H 5 HOH B 23 323 43 HOH HOH . 
H 5 HOH B 24 324 45 HOH HOH . 
H 5 HOH B 25 325 48 HOH HOH . 
H 5 HOH B 26 326 52 HOH HOH . 
H 5 HOH B 27 327 53 HOH HOH . 
H 5 HOH B 28 328 57 HOH HOH . 
H 5 HOH B 29 329 58 HOH HOH . 
H 5 HOH B 30 330 59 HOH HOH . 
H 5 HOH B 31 331 60 HOH HOH . 
H 5 HOH B 32 332 61 HOH HOH . 
H 5 HOH B 33 333 62 HOH HOH . 
H 5 HOH B 34 334 64 HOH HOH . 
H 5 HOH B 35 335 65 HOH HOH . 
H 5 HOH B 36 336 69 HOH HOH . 
H 5 HOH B 37 337 71 HOH HOH . 
H 5 HOH B 38 338 72 HOH HOH . 
H 5 HOH B 39 339 76 HOH HOH . 
H 5 HOH B 40 340 78 HOH HOH . 
H 5 HOH B 41 341 84 HOH HOH . 
H 5 HOH B 42 342 85 HOH HOH . 
H 5 HOH B 43 343 86 HOH HOH . 
H 5 HOH B 44 344 89 HOH HOH . 
H 5 HOH B 45 345 90 HOH HOH . 
H 5 HOH B 46 346 91 HOH HOH . 
H 5 HOH B 47 347 102 HOH HOH . 
H 5 HOH B 48 348 103 HOH HOH . 
H 5 HOH B 49 349 104 HOH HOH . 
H 5 HOH B 50 350 105 HOH HOH . 
H 5 HOH B 51 351 106 HOH HOH . 
H 5 HOH B 52 352 107 HOH HOH . 
H 5 HOH B 53 353 113 HOH HOH . 
H 5 HOH B 54 354 114 HOH HOH . 
H 5 HOH B 55 355 115 HOH HOH . 
H 5 HOH B 56 356 116 HOH HOH . 
H 5 HOH B 57 357 117 HOH HOH . 
H 5 HOH B 58 358 118 HOH HOH . 
H 5 HOH B 59 359 119 HOH HOH . 
H 5 HOH B 60 360 120 HOH HOH . 
H 5 HOH B 61 361 121 HOH HOH . 
H 5 HOH B 62 362 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 -19.207 3.772 9.482 1 36.47 ? C1 GOL 204 B 1 
HETATM 2 O O1 GOL . . . F 4 -17.921 3.208 9.18 1 48.07 ? O1 GOL 204 B 1 
HETATM 3 C C2 GOL . . . F 4 -19.534 3.475 10.96 1 37.58 ? C2 GOL 204 B 1 
HETATM 4 O O2 GOL . . . F 4 -20.324 4.543 11.5 1 39.02 ? O2 GOL 204 B 1 
HETATM 5 C C3 GOL . . . F 4 -20.327 2.176 11.133 1 40.07 ? C3 GOL 204 B 1 
HETATM 6 O O3 GOL . . . F 4 -20.99 1.986 9.876 1 45.34 ? O3 GOL 204 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#