data_4NBK # _model_server_result.job_id mcWmlZg4w-e25Cu_7QjuPw _model_server_result.datetime_utc '2024-11-26 05:35:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nbk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 4NBK # _exptl.entry_id 4NBK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NBK _cell.length_a 115.7 _cell.length_b 115.7 _cell.length_c 79.691 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NBK _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 291 n n P O2 PO4 sing 292 n n P O3 PO4 sing 293 n n P O4 PO4 sing 294 n n # _atom_sites.entry_id 4NBK _atom_sites.fract_transf_matrix[1][1] 0.008643 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2J5 A 1 401 1 2J5 2J5 . D 3 PO4 A 1 402 1 PO4 PO4 . E 3 PO4 A 1 403 3 PO4 PO4 . F 3 PO4 A 1 404 5 PO4 PO4 . G 3 PO4 A 1 405 6 PO4 PO4 . H 3 PO4 B 1 401 2 PO4 PO4 . I 3 PO4 B 1 402 4 PO4 PO4 . J 4 HOH A 1 501 1 HOH HOH . J 4 HOH A 2 502 3 HOH HOH . J 4 HOH A 3 503 5 HOH HOH . J 4 HOH A 4 504 8 HOH HOH . J 4 HOH A 5 505 10 HOH HOH . J 4 HOH A 6 506 11 HOH HOH . J 4 HOH A 7 507 12 HOH HOH . J 4 HOH A 8 508 14 HOH HOH . J 4 HOH A 9 509 15 HOH HOH . J 4 HOH A 10 510 16 HOH HOH . J 4 HOH A 11 511 17 HOH HOH . J 4 HOH A 12 512 18 HOH HOH . J 4 HOH A 13 513 19 HOH HOH . J 4 HOH A 14 514 20 HOH HOH . J 4 HOH A 15 515 21 HOH HOH . J 4 HOH A 16 516 24 HOH HOH . J 4 HOH A 17 517 26 HOH HOH . J 4 HOH A 18 518 27 HOH HOH . J 4 HOH A 19 519 30 HOH HOH . J 4 HOH A 20 520 31 HOH HOH . J 4 HOH A 21 521 34 HOH HOH . J 4 HOH A 22 522 35 HOH HOH . J 4 HOH A 23 523 37 HOH HOH . J 4 HOH A 24 524 39 HOH HOH . J 4 HOH A 25 525 40 HOH HOH . J 4 HOH A 26 526 41 HOH HOH . J 4 HOH A 27 527 42 HOH HOH . J 4 HOH A 28 528 43 HOH HOH . J 4 HOH A 29 529 44 HOH HOH . J 4 HOH A 30 530 45 HOH HOH . J 4 HOH A 31 531 46 HOH HOH . J 4 HOH A 32 532 49 HOH HOH . J 4 HOH A 33 533 51 HOH HOH . J 4 HOH A 34 534 54 HOH HOH . J 4 HOH A 35 535 55 HOH HOH . J 4 HOH A 36 536 57 HOH HOH . J 4 HOH A 37 537 58 HOH HOH . J 4 HOH A 38 538 59 HOH HOH . J 4 HOH A 39 539 60 HOH HOH . J 4 HOH A 40 540 61 HOH HOH . J 4 HOH A 41 541 64 HOH HOH . J 4 HOH A 42 542 65 HOH HOH . J 4 HOH A 43 543 70 HOH HOH . J 4 HOH A 44 544 73 HOH HOH . J 4 HOH A 45 545 75 HOH HOH . J 4 HOH A 46 546 79 HOH HOH . J 4 HOH A 47 547 80 HOH HOH . J 4 HOH A 48 548 83 HOH HOH . J 4 HOH A 49 549 84 HOH HOH . J 4 HOH A 50 550 85 HOH HOH . J 4 HOH A 51 551 86 HOH HOH . J 4 HOH A 52 552 87 HOH HOH . J 4 HOH A 53 553 89 HOH HOH . J 4 HOH A 54 554 96 HOH HOH . J 4 HOH A 55 555 97 HOH HOH . J 4 HOH A 56 556 101 HOH HOH . J 4 HOH A 57 557 102 HOH HOH . J 4 HOH A 58 558 104 HOH HOH . J 4 HOH A 59 559 105 HOH HOH . J 4 HOH A 60 560 110 HOH HOH . J 4 HOH A 61 561 111 HOH HOH . J 4 HOH A 62 562 112 HOH HOH . J 4 HOH A 63 563 113 HOH HOH . J 4 HOH A 64 564 115 HOH HOH . J 4 HOH A 65 565 116 HOH HOH . J 4 HOH A 66 566 117 HOH HOH . J 4 HOH A 67 567 121 HOH HOH . J 4 HOH A 68 568 125 HOH HOH . J 4 HOH A 69 569 127 HOH HOH . J 4 HOH A 70 570 128 HOH HOH . J 4 HOH A 71 571 129 HOH HOH . J 4 HOH A 72 572 130 HOH HOH . J 4 HOH A 73 573 131 HOH HOH . J 4 HOH A 74 574 132 HOH HOH . J 4 HOH A 75 575 133 HOH HOH . J 4 HOH A 76 576 135 HOH HOH . J 4 HOH A 77 577 136 HOH HOH . J 4 HOH A 78 578 137 HOH HOH . J 4 HOH A 79 579 139 HOH HOH . J 4 HOH A 80 580 140 HOH HOH . J 4 HOH A 81 581 144 HOH HOH . J 4 HOH A 82 582 147 HOH HOH . J 4 HOH A 83 583 148 HOH HOH . J 4 HOH A 84 584 152 HOH HOH . J 4 HOH A 85 585 157 HOH HOH . J 4 HOH A 86 586 158 HOH HOH . J 4 HOH A 87 587 161 HOH HOH . J 4 HOH A 88 588 162 HOH HOH . J 4 HOH A 89 589 165 HOH HOH . J 4 HOH A 90 590 168 HOH HOH . J 4 HOH A 91 591 169 HOH HOH . J 4 HOH A 92 592 171 HOH HOH . J 4 HOH A 93 593 172 HOH HOH . J 4 HOH A 94 594 173 HOH HOH . J 4 HOH A 95 595 174 HOH HOH . J 4 HOH A 96 596 176 HOH HOH . J 4 HOH A 97 597 180 HOH HOH . J 4 HOH A 98 598 183 HOH HOH . J 4 HOH A 99 599 184 HOH HOH . J 4 HOH A 100 600 185 HOH HOH . J 4 HOH A 101 601 188 HOH HOH . J 4 HOH A 102 602 190 HOH HOH . J 4 HOH A 103 603 191 HOH HOH . J 4 HOH A 104 604 193 HOH HOH . J 4 HOH A 105 605 194 HOH HOH . J 4 HOH A 106 606 198 HOH HOH . J 4 HOH A 107 607 199 HOH HOH . J 4 HOH A 108 608 201 HOH HOH . J 4 HOH A 109 609 204 HOH HOH . J 4 HOH A 110 610 206 HOH HOH . J 4 HOH A 111 611 210 HOH HOH . J 4 HOH A 112 612 212 HOH HOH . J 4 HOH A 113 613 214 HOH HOH . J 4 HOH A 114 614 215 HOH HOH . J 4 HOH A 115 615 216 HOH HOH . J 4 HOH A 116 616 217 HOH HOH . J 4 HOH A 117 617 218 HOH HOH . J 4 HOH A 118 618 219 HOH HOH . J 4 HOH A 119 619 220 HOH HOH . J 4 HOH A 120 620 221 HOH HOH . J 4 HOH A 121 621 222 HOH HOH . J 4 HOH A 122 622 223 HOH HOH . J 4 HOH A 123 623 225 HOH HOH . J 4 HOH A 124 624 227 HOH HOH . J 4 HOH A 125 625 228 HOH HOH . J 4 HOH A 126 626 229 HOH HOH . J 4 HOH A 127 627 230 HOH HOH . J 4 HOH A 128 628 231 HOH HOH . J 4 HOH A 129 629 232 HOH HOH . J 4 HOH A 130 630 233 HOH HOH . J 4 HOH A 131 631 235 HOH HOH . J 4 HOH A 132 632 238 HOH HOH . J 4 HOH A 133 633 239 HOH HOH . J 4 HOH A 134 634 241 HOH HOH . J 4 HOH A 135 635 242 HOH HOH . J 4 HOH A 136 636 247 HOH HOH . J 4 HOH A 137 637 248 HOH HOH . J 4 HOH A 138 638 249 HOH HOH . J 4 HOH A 139 639 251 HOH HOH . J 4 HOH A 140 640 252 HOH HOH . J 4 HOH A 141 641 253 HOH HOH . J 4 HOH A 142 642 254 HOH HOH . J 4 HOH A 143 643 257 HOH HOH . J 4 HOH A 144 644 262 HOH HOH . J 4 HOH A 145 645 263 HOH HOH . J 4 HOH A 146 646 266 HOH HOH . J 4 HOH A 147 647 271 HOH HOH . J 4 HOH A 148 648 273 HOH HOH . J 4 HOH A 149 649 277 HOH HOH . J 4 HOH A 150 650 279 HOH HOH . J 4 HOH A 151 651 281 HOH HOH . J 4 HOH A 152 652 284 HOH HOH . J 4 HOH A 153 653 285 HOH HOH . J 4 HOH A 154 654 286 HOH HOH . J 4 HOH A 155 655 287 HOH HOH . J 4 HOH A 156 656 290 HOH HOH . J 4 HOH A 157 657 298 HOH HOH . J 4 HOH A 158 658 299 HOH HOH . J 4 HOH A 159 659 301 HOH HOH . J 4 HOH A 160 660 302 HOH HOH . J 4 HOH A 161 661 303 HOH HOH . J 4 HOH A 162 662 304 HOH HOH . J 4 HOH A 163 663 307 HOH HOH . J 4 HOH A 164 664 311 HOH HOH . J 4 HOH A 165 665 312 HOH HOH . J 4 HOH A 166 666 313 HOH HOH . J 4 HOH A 167 667 315 HOH HOH . J 4 HOH A 168 668 316 HOH HOH . J 4 HOH A 169 669 317 HOH HOH . J 4 HOH A 170 670 318 HOH HOH . K 4 HOH B 1 501 2 HOH HOH . K 4 HOH B 2 502 4 HOH HOH . K 4 HOH B 3 503 6 HOH HOH . K 4 HOH B 4 504 7 HOH HOH . K 4 HOH B 5 505 9 HOH HOH . K 4 HOH B 6 506 13 HOH HOH . K 4 HOH B 7 507 22 HOH HOH . K 4 HOH B 8 508 23 HOH HOH . K 4 HOH B 9 509 25 HOH HOH . K 4 HOH B 10 510 28 HOH HOH . K 4 HOH B 11 511 29 HOH HOH . K 4 HOH B 12 512 32 HOH HOH . K 4 HOH B 13 513 33 HOH HOH . K 4 HOH B 14 514 36 HOH HOH . K 4 HOH B 15 515 38 HOH HOH . K 4 HOH B 16 516 47 HOH HOH . K 4 HOH B 17 517 48 HOH HOH . K 4 HOH B 18 518 50 HOH HOH . K 4 HOH B 19 519 52 HOH HOH . K 4 HOH B 20 520 53 HOH HOH . K 4 HOH B 21 521 56 HOH HOH . K 4 HOH B 22 522 62 HOH HOH . K 4 HOH B 23 523 63 HOH HOH . K 4 HOH B 24 524 66 HOH HOH . K 4 HOH B 25 525 67 HOH HOH . K 4 HOH B 26 526 68 HOH HOH . K 4 HOH B 27 527 69 HOH HOH . K 4 HOH B 28 528 71 HOH HOH . K 4 HOH B 29 529 72 HOH HOH . K 4 HOH B 30 530 74 HOH HOH . K 4 HOH B 31 531 76 HOH HOH . K 4 HOH B 32 532 77 HOH HOH . K 4 HOH B 33 533 78 HOH HOH . K 4 HOH B 34 534 81 HOH HOH . K 4 HOH B 35 535 82 HOH HOH . K 4 HOH B 36 536 88 HOH HOH . K 4 HOH B 37 537 90 HOH HOH . K 4 HOH B 38 538 91 HOH HOH . K 4 HOH B 39 539 92 HOH HOH . K 4 HOH B 40 540 93 HOH HOH . K 4 HOH B 41 541 94 HOH HOH . K 4 HOH B 42 542 95 HOH HOH . K 4 HOH B 43 543 98 HOH HOH . K 4 HOH B 44 544 99 HOH HOH . K 4 HOH B 45 545 100 HOH HOH . K 4 HOH B 46 546 103 HOH HOH . K 4 HOH B 47 547 106 HOH HOH . K 4 HOH B 48 548 107 HOH HOH . K 4 HOH B 49 549 108 HOH HOH . K 4 HOH B 50 550 109 HOH HOH . K 4 HOH B 51 551 114 HOH HOH . K 4 HOH B 52 552 118 HOH HOH . K 4 HOH B 53 553 119 HOH HOH . K 4 HOH B 54 554 120 HOH HOH . K 4 HOH B 55 555 122 HOH HOH . K 4 HOH B 56 556 123 HOH HOH . K 4 HOH B 57 557 124 HOH HOH . K 4 HOH B 58 558 126 HOH HOH . K 4 HOH B 59 559 134 HOH HOH . K 4 HOH B 60 560 138 HOH HOH . K 4 HOH B 61 561 141 HOH HOH . K 4 HOH B 62 562 142 HOH HOH . K 4 HOH B 63 563 143 HOH HOH . K 4 HOH B 64 564 145 HOH HOH . K 4 HOH B 65 565 146 HOH HOH . K 4 HOH B 66 566 149 HOH HOH . K 4 HOH B 67 567 150 HOH HOH . K 4 HOH B 68 568 151 HOH HOH . K 4 HOH B 69 569 153 HOH HOH . K 4 HOH B 70 570 154 HOH HOH . K 4 HOH B 71 571 155 HOH HOH . K 4 HOH B 72 572 156 HOH HOH . K 4 HOH B 73 573 159 HOH HOH . K 4 HOH B 74 574 160 HOH HOH . K 4 HOH B 75 575 163 HOH HOH . K 4 HOH B 76 576 164 HOH HOH . K 4 HOH B 77 577 166 HOH HOH . K 4 HOH B 78 578 167 HOH HOH . K 4 HOH B 79 579 170 HOH HOH . K 4 HOH B 80 580 175 HOH HOH . K 4 HOH B 81 581 177 HOH HOH . K 4 HOH B 82 582 178 HOH HOH . K 4 HOH B 83 583 179 HOH HOH . K 4 HOH B 84 584 181 HOH HOH . K 4 HOH B 85 585 182 HOH HOH . K 4 HOH B 86 586 186 HOH HOH . K 4 HOH B 87 587 187 HOH HOH . K 4 HOH B 88 588 189 HOH HOH . K 4 HOH B 89 589 192 HOH HOH . K 4 HOH B 90 590 195 HOH HOH . K 4 HOH B 91 591 196 HOH HOH . K 4 HOH B 92 592 197 HOH HOH . K 4 HOH B 93 593 200 HOH HOH . K 4 HOH B 94 594 202 HOH HOH . K 4 HOH B 95 595 203 HOH HOH . K 4 HOH B 96 596 205 HOH HOH . K 4 HOH B 97 597 207 HOH HOH . K 4 HOH B 98 598 208 HOH HOH . K 4 HOH B 99 599 209 HOH HOH . K 4 HOH B 100 600 211 HOH HOH . K 4 HOH B 101 601 213 HOH HOH . K 4 HOH B 102 602 224 HOH HOH . K 4 HOH B 103 603 226 HOH HOH . K 4 HOH B 104 604 234 HOH HOH . K 4 HOH B 105 605 236 HOH HOH . K 4 HOH B 106 606 237 HOH HOH . K 4 HOH B 107 607 240 HOH HOH . K 4 HOH B 108 608 243 HOH HOH . K 4 HOH B 109 609 244 HOH HOH . K 4 HOH B 110 610 245 HOH HOH . K 4 HOH B 111 611 246 HOH HOH . K 4 HOH B 112 612 250 HOH HOH . K 4 HOH B 113 613 255 HOH HOH . K 4 HOH B 114 614 256 HOH HOH . K 4 HOH B 115 615 258 HOH HOH . K 4 HOH B 116 616 259 HOH HOH . K 4 HOH B 117 617 260 HOH HOH . K 4 HOH B 118 618 261 HOH HOH . K 4 HOH B 119 619 264 HOH HOH . K 4 HOH B 120 620 265 HOH HOH . K 4 HOH B 121 621 267 HOH HOH . K 4 HOH B 122 622 268 HOH HOH . K 4 HOH B 123 623 269 HOH HOH . K 4 HOH B 124 624 270 HOH HOH . K 4 HOH B 125 625 272 HOH HOH . K 4 HOH B 126 626 274 HOH HOH . K 4 HOH B 127 627 275 HOH HOH . K 4 HOH B 128 628 276 HOH HOH . K 4 HOH B 129 629 278 HOH HOH . K 4 HOH B 130 630 280 HOH HOH . K 4 HOH B 131 631 282 HOH HOH . K 4 HOH B 132 632 283 HOH HOH . K 4 HOH B 133 633 288 HOH HOH . K 4 HOH B 134 634 289 HOH HOH . K 4 HOH B 135 635 291 HOH HOH . K 4 HOH B 136 636 292 HOH HOH . K 4 HOH B 137 637 293 HOH HOH . K 4 HOH B 138 638 294 HOH HOH . K 4 HOH B 139 639 295 HOH HOH . K 4 HOH B 140 640 296 HOH HOH . K 4 HOH B 141 641 297 HOH HOH . K 4 HOH B 142 642 300 HOH HOH . K 4 HOH B 143 643 305 HOH HOH . K 4 HOH B 144 644 306 HOH HOH . K 4 HOH B 145 645 308 HOH HOH . K 4 HOH B 146 646 309 HOH HOH . K 4 HOH B 147 647 310 HOH HOH . K 4 HOH B 148 648 314 HOH HOH . K 4 HOH B 149 649 319 HOH HOH . K 4 HOH B 150 650 320 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 3 38.66 14.103 2.781 1 92.86 ? P PO4 405 A 1 HETATM 2 O O1 PO4 . . . G 3 39.937 14.905 2.674 1 94.72 ? O1 PO4 405 A 1 HETATM 3 O O2 PO4 . . . G 3 37.596 14.725 1.906 1 90.63 ? O2 PO4 405 A 1 HETATM 4 O O3 PO4 . . . G 3 38.918 12.686 2.324 1 95.02 ? O3 PO4 405 A 1 HETATM 5 O O4 PO4 . . . G 3 38.192 14.092 4.218 1 90.02 ? O4 PO4 405 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #