data_4NC3 # _model_server_result.job_id EUOyfIMNDlpOZ-ufh8SEeg _model_server_result.datetime_utc '2024-11-26 17:52:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nc3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1209}' # _entry.id 4NC3 # _exptl.entry_id 4NC3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NC3 _cell.length_a 61.5 _cell.length_b 122.2 _cell.length_c 168.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 103 A CYS 128 1_555 A SG CYS 182 A CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 366 A CYS 350 1_555 A SG CYS 369 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A SG CYS 413 A CYS 397 1_555 B C1 PLM . A PLM 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.655 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 797 n n C C2 TRS sing 798 n n C C3 TRS sing 799 n n C N TRS sing 800 n n C1 O1 TRS sing 801 n n C1 H11 TRS sing 802 n n C1 H12 TRS sing 803 n n C2 O2 TRS sing 804 n n C2 H21 TRS sing 805 n n C2 H22 TRS sing 806 n n C3 O3 TRS sing 807 n n C3 H31 TRS sing 808 n n C3 H32 TRS sing 809 n n N HN1 TRS sing 810 n n N HN2 TRS sing 811 n n N HN3 TRS sing 812 n n O1 HO1 TRS sing 813 n n O2 HO2 TRS sing 814 n n O3 HO3 TRS sing 815 n n # _atom_sites.entry_id 4NC3 _atom_sites.fract_transf_matrix[1][1] 0.01626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 1201 501 PLM PLM . C 3 ERM A 1 1202 1 ERM ERM . D 4 CLR A 1 1203 2 CLR CLR . E 5 OLC A 1 1204 3 OLC OLC . F 5 OLC A 1 1205 5 OLC OLC . G 6 PEG A 1 1206 9 PEG PEG . H 5 OLC A 1 1207 2 OLC OLC . I 5 OLC A 1 1208 3 OLC OLC . J 7 TRS A 1 1209 1 TRS TRS . K 8 OLA A 1 1210 1 OLA OLA . L 8 OLA A 1 1211 2 OLA OLA . M 8 OLA A 1 1212 3 OLA OLA . N 9 DGA A 1 1213 1 DGA DGA . O 9 DGA A 1 1214 2 DGA DGA . P 10 HOH A 1 1301 12 HOH HOH . P 10 HOH A 2 1302 5 HOH HOH . P 10 HOH A 3 1303 7 HOH HOH . P 10 HOH A 4 1304 8 HOH HOH . P 10 HOH A 5 1305 10 HOH HOH . P 10 HOH A 6 1306 11 HOH HOH . P 10 HOH A 7 1307 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . J 7 -31.591 -8.376 21.657 1 137.59 ? C TRS 1209 A 1 HETATM 2 C C1 TRS . . . J 7 -32.918 -7.753 22.079 1 137.26 ? C1 TRS 1209 A 1 HETATM 3 C C2 TRS . . . J 7 -31.826 -9.726 20.976 1 136.29 ? C2 TRS 1209 A 1 HETATM 4 C C3 TRS . . . J 7 -30.691 -8.556 22.876 1 137.48 ? C3 TRS 1209 A 1 HETATM 5 N N TRS . . . J 7 -30.9 -7.457 20.748 1 136.64 ? N TRS 1209 A 1 HETATM 6 O O1 TRS . . . J 7 -33.388 -8.366 23.26 1 136.01 ? O1 TRS 1209 A 1 HETATM 7 O O2 TRS . . . J 7 -32.338 -9.603 19.665 1 133.78 ? O2 TRS 1209 A 1 HETATM 8 O O3 TRS . . . J 7 -29.476 -9.162 22.492 1 138.22 ? O3 TRS 1209 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #