data_4NEQ # _model_server_result.job_id QZwg3voF1Hn3zK2Uo5-YFw _model_server_result.datetime_utc '2024-11-23 21:03:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4neq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4NEQ # _exptl.entry_id 4NEQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4NEQ _cell.length_a 67.947 _cell.length_b 67.947 _cell.length_c 180.209 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_645 y+1,x-1,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 101.9205 -58.843828 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 A MSE 1 1_555 A N LYS 2 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C ASN 42 A ASN 42 1_555 A N MSE 43 A MSE 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C MSE 43 A MSE 43 1_555 A N ASP 44 A ASP 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 A C LYS 73 A LYS 73 1_555 A N MSE 74 A MSE 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C MSE 74 A MSE 74 1_555 A N LEU 75 A LEU 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C ASN 126 A ASN 126 1_555 A N MSE 127 A MSE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 A C MSE 127 A MSE 127 1_555 A N PRO 128 A PRO 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale8 A C LEU 275 A LEU 275 1_555 A N MSE 276 A MSE 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale9 A C MSE 276 A MSE 276 1_555 A N LEU 277 A LEU 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C ILE 336 A ILE 336 1_555 A N MSE 337 A MSE 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale11 A C MSE 337 A MSE 337 1_555 A N LEU 338 A LEU 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 332 n n C C2 TRS sing 333 n n C C3 TRS sing 334 n n C N TRS sing 335 n n C1 O1 TRS sing 336 n n C1 H11 TRS sing 337 n n C1 H12 TRS sing 338 n n C2 O2 TRS sing 339 n n C2 H21 TRS sing 340 n n C2 H22 TRS sing 341 n n C3 O3 TRS sing 342 n n C3 H31 TRS sing 343 n n C3 H32 TRS sing 344 n n N HN1 TRS sing 345 n n N HN2 TRS sing 346 n n N HN3 TRS sing 347 n n O1 HO1 TRS sing 348 n n O2 HO2 TRS sing 349 n n O3 HO3 TRS sing 350 n n # _atom_sites.entry_id 4NEQ _atom_sites.fract_transf_matrix[1][1] 0.014717 _atom_sites.fract_transf_matrix[1][2] 0.008497 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016994 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005549 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id TRS _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 502 _pdbx_nonpoly_scheme.pdb_mon_id TRS _pdbx_nonpoly_scheme.auth_mon_id TRS _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 39.653 -19.034 -8.676 1 38.67 ? C TRS 401 A 1 HETATM 2 C C1 TRS . . . B 2 38.355 -19.282 -7.978 1 55.89 ? C1 TRS 401 A 1 HETATM 3 C C2 TRS . . . B 2 39.915 -20.284 -9.414 1 35.06 ? C2 TRS 401 A 1 HETATM 4 C C3 TRS . . . B 2 39.654 -17.905 -9.661 1 29.83 ? C3 TRS 401 A 1 HETATM 5 N N TRS . . . B 2 40.664 -18.855 -7.685 1 30.04 ? N TRS 401 A 1 HETATM 6 O O1 TRS . . . B 2 37.759 -20.519 -8.22 1 60.9 ? O1 TRS 401 A 1 HETATM 7 O O2 TRS . . . B 2 40.186 -21.333 -8.583 1 28.98 ? O2 TRS 401 A 1 HETATM 8 O O3 TRS . . . B 2 40.477 -17.988 -10.771 1 15.75 ? O3 TRS 401 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 640 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #