data_4NEV
#
_model_server_result.job_id            1sBfIDanpdTzA5tuLY947A 
_model_server_result.datetime_utc      '2024-11-16 00:22:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nev 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    4NEV 
#
_exptl.entry_id    4NEV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NEV 
_cell.length_a            117.2 
_cell.length_b            117.2 
_cell.length_c            224.6 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NEV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 170 n n 
PA O2A FAD sing 171 n n 
PA O5B FAD sing 172 n n 
PA O3P FAD sing 173 n n 
O2A HOA2 FAD sing 174 n n 
O5B C5B FAD sing 175 n n 
C5B C4B FAD sing 176 n n 
C5B H51A FAD sing 177 n n 
C5B H52A FAD sing 178 n n 
C4B O4B FAD sing 179 n n 
C4B C3B FAD sing 180 n n 
C4B H4B FAD sing 181 n n 
O4B C1B FAD sing 182 n n 
C3B O3B FAD sing 183 n n 
C3B C2B FAD sing 184 n n 
C3B H3B FAD sing 185 n n 
O3B HO3A FAD sing 186 n n 
C2B O2B FAD sing 187 n n 
C2B C1B FAD sing 188 n n 
C2B H2B FAD sing 189 n n 
O2B HO2A FAD sing 190 n n 
C1B N9A FAD sing 191 n n 
C1B H1B FAD sing 192 n n 
N9A C8A FAD sing 193 n y 
N9A C4A FAD sing 194 n y 
C8A N7A FAD doub 195 n y 
C8A H8A FAD sing 196 n n 
N7A C5A FAD sing 197 n y 
C5A C6A FAD sing 198 n y 
C5A C4A FAD doub 199 n y 
C6A N6A FAD sing 200 n n 
C6A N1A FAD doub 201 n y 
N6A H61A FAD sing 202 n n 
N6A H62A FAD sing 203 n n 
N1A C2A FAD sing 204 n y 
C2A N3A FAD doub 205 n y 
C2A H2A FAD sing 206 n n 
N3A C4A FAD sing 207 n y 
N1 C2 FAD sing 208 n n 
N1 C10 FAD doub 209 n n 
C2 O2 FAD doub 210 n n 
C2 N3 FAD sing 211 n n 
N3 C4 FAD sing 212 n n 
N3 HN3 FAD sing 213 n n 
C4 O4 FAD doub 214 n n 
C4 C4X FAD sing 215 n n 
C4X N5 FAD doub 216 n n 
C4X C10 FAD sing 217 n n 
N5 C5X FAD sing 218 n n 
C5X C6 FAD doub 219 n y 
C5X C9A FAD sing 220 n y 
C6 C7 FAD sing 221 n y 
C6 H6 FAD sing 222 n n 
C7 C7M FAD sing 223 n n 
C7 C8 FAD doub 224 n y 
C7M HM71 FAD sing 225 n n 
C7M HM72 FAD sing 226 n n 
C7M HM73 FAD sing 227 n n 
C8 C8M FAD sing 228 n n 
C8 C9 FAD sing 229 n y 
C8M HM81 FAD sing 230 n n 
C8M HM82 FAD sing 231 n n 
C8M HM83 FAD sing 232 n n 
C9 C9A FAD doub 233 n y 
C9 H9 FAD sing 234 n n 
C9A N10 FAD sing 235 n n 
N10 C10 FAD sing 236 n n 
N10 C1' FAD sing 237 n n 
C1' C2' FAD sing 238 n n 
C1' "H1'1" FAD sing 239 n n 
C1' "H1'2" FAD sing 240 n n 
C2' O2' FAD sing 241 n n 
C2' C3' FAD sing 242 n n 
C2' H2' FAD sing 243 n n 
O2' HO2' FAD sing 244 n n 
C3' O3' FAD sing 245 n n 
C3' C4' FAD sing 246 n n 
C3' H3' FAD sing 247 n n 
O3' HO3' FAD sing 248 n n 
C4' O4' FAD sing 249 n n 
C4' C5' FAD sing 250 n n 
C4' H4' FAD sing 251 n n 
O4' HO4' FAD sing 252 n n 
C5' O5' FAD sing 253 n n 
C5' "H5'1" FAD sing 254 n n 
C5' "H5'2" FAD sing 255 n n 
O5' P FAD sing 256 n n 
P O1P FAD doub 257 n n 
P O2P FAD sing 258 n n 
P O3P FAD sing 259 n n 
O2P HOP2 FAD sing 260 n n 
#
_atom_sites.entry_id                     4NEV 
_atom_sites.fract_transf_matrix[1][1]    0.008532 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008532 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004452 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 501 998 FAD FAD . 
D 3 2JR A 1 502 999 2JR DRG . 
E 4 SO4 A 1 503 2 SO4 SO4 . 
F 4 SO4 A 1 504 3 SO4 SO4 . 
G 4 SO4 A 1 505 7 SO4 SO4 . 
H 2 FAD B 1 501 998 FAD FAD . 
I 3 2JR B 1 502 999 2JR DRG . 
J 4 SO4 B 1 503 1 SO4 SO4 . 
K 4 SO4 B 1 504 4 SO4 SO4 . 
L 4 SO4 B 1 505 5 SO4 SO4 . 
M 4 SO4 B 1 506 6 SO4 SO4 . 
N 4 SO4 B 1 507 8 SO4 SO4 . 
O 5 EPE B 1 508 1 EPE EPE . 
P 3 2JR B 1 509 999 2JR DRG . 
Q 6 HOH A 1 601 2 HOH HOH . 
Q 6 HOH A 2 602 3 HOH HOH . 
Q 6 HOH A 3 603 6 HOH HOH . 
Q 6 HOH A 4 604 8 HOH HOH . 
Q 6 HOH A 5 605 9 HOH HOH . 
Q 6 HOH A 6 606 10 HOH HOH . 
Q 6 HOH A 7 607 11 HOH HOH . 
Q 6 HOH A 8 608 15 HOH HOH . 
Q 6 HOH A 9 609 18 HOH HOH . 
Q 6 HOH A 10 610 19 HOH HOH . 
Q 6 HOH A 11 611 23 HOH HOH . 
Q 6 HOH A 12 612 24 HOH HOH . 
Q 6 HOH A 13 613 28 HOH HOH . 
Q 6 HOH A 14 614 31 HOH HOH . 
Q 6 HOH A 15 615 32 HOH HOH . 
Q 6 HOH A 16 616 33 HOH HOH . 
Q 6 HOH A 17 617 35 HOH HOH . 
Q 6 HOH A 18 618 38 HOH HOH . 
Q 6 HOH A 19 619 39 HOH HOH . 
Q 6 HOH A 20 620 40 HOH HOH . 
Q 6 HOH A 21 621 42 HOH HOH . 
Q 6 HOH A 22 622 43 HOH HOH . 
Q 6 HOH A 23 623 46 HOH HOH . 
Q 6 HOH A 24 624 50 HOH HOH . 
Q 6 HOH A 25 625 53 HOH HOH . 
Q 6 HOH A 26 626 58 HOH HOH . 
Q 6 HOH A 27 627 59 HOH HOH . 
Q 6 HOH A 28 628 62 HOH HOH . 
R 6 HOH B 1 601 1 HOH HOH . 
R 6 HOH B 2 602 4 HOH HOH . 
R 6 HOH B 3 603 5 HOH HOH . 
R 6 HOH B 4 604 7 HOH HOH . 
R 6 HOH B 5 605 12 HOH HOH . 
R 6 HOH B 6 606 13 HOH HOH . 
R 6 HOH B 7 607 14 HOH HOH . 
R 6 HOH B 8 608 16 HOH HOH . 
R 6 HOH B 9 609 17 HOH HOH . 
R 6 HOH B 10 610 20 HOH HOH . 
R 6 HOH B 11 611 21 HOH HOH . 
R 6 HOH B 12 612 22 HOH HOH . 
R 6 HOH B 13 613 25 HOH HOH . 
R 6 HOH B 14 614 26 HOH HOH . 
R 6 HOH B 15 615 27 HOH HOH . 
R 6 HOH B 16 616 29 HOH HOH . 
R 6 HOH B 17 617 30 HOH HOH . 
R 6 HOH B 18 618 34 HOH HOH . 
R 6 HOH B 19 619 36 HOH HOH . 
R 6 HOH B 20 620 37 HOH HOH . 
R 6 HOH B 21 621 41 HOH HOH . 
R 6 HOH B 22 622 44 HOH HOH . 
R 6 HOH B 23 623 45 HOH HOH . 
R 6 HOH B 24 624 47 HOH HOH . 
R 6 HOH B 25 625 48 HOH HOH . 
R 6 HOH B 26 626 49 HOH HOH . 
R 6 HOH B 27 627 51 HOH HOH . 
R 6 HOH B 28 628 52 HOH HOH . 
R 6 HOH B 29 629 54 HOH HOH . 
R 6 HOH B 30 630 55 HOH HOH . 
R 6 HOH B 31 631 56 HOH HOH . 
R 6 HOH B 32 632 57 HOH HOH . 
R 6 HOH B 33 633 60 HOH HOH . 
R 6 HOH B 34 634 61 HOH HOH . 
R 6 HOH B 35 635 63 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 45.482 -35.058 -0.535 1 59.07 ? PA FAD 501 A 1 
HETATM 2 O O1A FAD . . . C 2 44.773 -35.041 -1.869 1 54.82 ? O1A FAD 501 A 1 
HETATM 3 O O2A FAD . . . C 2 45.813 -33.766 0.169 1 56.37 ? O2A FAD 501 A 1 
HETATM 4 O O5B FAD . . . C 2 46.887 -35.825 -0.701 1 63.36 ? O5B FAD 501 A 1 
HETATM 5 C C5B FAD . . . C 2 47.059 -36.903 -1.614 1 63.46 ? C5B FAD 501 A 1 
HETATM 6 C C4B FAD . . . C 2 48.453 -36.803 -2.213 1 65.71 ? C4B FAD 501 A 1 
HETATM 7 O O4B FAD . . . C 2 49.027 -38.107 -2.285 1 66.31 ? O4B FAD 501 A 1 
HETATM 8 C C3B FAD . . . C 2 48.465 -36.217 -3.62 1 65.64 ? C3B FAD 501 A 1 
HETATM 9 O O3B FAD . . . C 2 49.307 -35.057 -3.64 1 64.22 ? O3B FAD 501 A 1 
HETATM 10 C C2B FAD . . . C 2 49.009 -37.318 -4.514 1 66.02 ? C2B FAD 501 A 1 
HETATM 11 O O2B FAD . . . C 2 49.948 -36.806 -5.468 1 65.93 ? O2B FAD 501 A 1 
HETATM 12 C C1B FAD . . . C 2 49.676 -38.284 -3.543 1 67.49 ? C1B FAD 501 A 1 
HETATM 13 N N9A FAD . . . C 2 49.595 -39.714 -3.923 1 69.37 ? N9A FAD 501 A 1 
HETATM 14 C C8A FAD . . . C 2 48.506 -40.385 -4.345 1 71.8 ? C8A FAD 501 A 1 
HETATM 15 N N7A FAD . . . C 2 48.81 -41.691 -4.575 1 69.67 ? N7A FAD 501 A 1 
HETATM 16 C C5A FAD . . . C 2 50.112 -41.867 -4.285 1 68.03 ? C5A FAD 501 A 1 
HETATM 17 C C6A FAD . . . C 2 51.077 -42.994 -4.304 1 66.65 ? C6A FAD 501 A 1 
HETATM 18 N N6A FAD . . . C 2 50.694 -44.234 -4.695 1 66.09 ? N6A FAD 501 A 1 
HETATM 19 N N1A FAD . . . C 2 52.35 -42.737 -3.92 1 64.81 ? N1A FAD 501 A 1 
HETATM 20 C C2A FAD . . . C 2 52.754 -41.508 -3.533 1 67.81 ? C2A FAD 501 A 1 
HETATM 21 N N3A FAD . . . C 2 51.926 -40.445 -3.494 1 66.43 ? N3A FAD 501 A 1 
HETATM 22 C C4A FAD . . . C 2 50.622 -40.56 -3.847 1 68.16 ? C4A FAD 501 A 1 
HETATM 23 N N1 FAD . . . C 2 38.348 -29.288 0.818 1 64.15 ? N1 FAD 501 A 1 
HETATM 24 C C2 FAD . . . C 2 38.043 -28.26 1.645 1 63.81 ? C2 FAD 501 A 1 
HETATM 25 O O2 FAD . . . C 2 38.082 -28.453 2.878 1 68.61 ? O2 FAD 501 A 1 
HETATM 26 N N3 FAD . . . C 2 37.7 -27.045 1.188 1 64.02 ? N3 FAD 501 A 1 
HETATM 27 C C4 FAD . . . C 2 37.633 -26.771 -0.122 1 63.74 ? C4 FAD 501 A 1 
HETATM 28 O O4 FAD . . . C 2 37.308 -25.626 -0.5 1 65.38 ? O4 FAD 501 A 1 
HETATM 29 C C4X FAD . . . C 2 37.955 -27.844 -1.1 1 63.36 ? C4X FAD 501 A 1 
HETATM 30 N N5 FAD . . . C 2 37.925 -27.663 -2.441 1 62.53 ? N5 FAD 501 A 1 
HETATM 31 C C5X FAD . . . C 2 38.226 -28.672 -3.296 1 63.15 ? C5X FAD 501 A 1 
HETATM 32 C C6 FAD . . . C 2 38.179 -28.454 -4.671 1 61.43 ? C6 FAD 501 A 1 
HETATM 33 C C7 FAD . . . C 2 38.486 -29.475 -5.566 1 61.47 ? C7 FAD 501 A 1 
HETATM 34 C C7M FAD . . . C 2 38.435 -29.224 -7.052 1 59.6 ? C7M FAD 501 A 1 
HETATM 35 C C8 FAD . . . C 2 38.873 -30.813 -5.051 1 61.25 ? C8 FAD 501 A 1 
HETATM 36 C C8M FAD . . . C 2 39.205 -31.925 -6.01 1 59.83 ? C8M FAD 501 A 1 
HETATM 37 C C9 FAD . . . C 2 38.915 -31.043 -3.68 1 62.05 ? C9 FAD 501 A 1 
HETATM 38 C C9A FAD . . . C 2 38.609 -30.022 -2.777 1 63.24 ? C9A FAD 501 A 1 
HETATM 39 N N10 FAD . . . C 2 38.651 -30.224 -1.377 1 62.35 ? N10 FAD 501 A 1 
HETATM 40 C C10 FAD . . . C 2 38.325 -29.154 -0.525 1 62.98 ? C10 FAD 501 A 1 
HETATM 41 C C1' FAD . . . C 2 39 -31.512 -0.779 1 64.48 ? C1' FAD 501 A 1 
HETATM 42 C C2' FAD . . . C 2 40.412 -31.487 -0.216 1 65.98 ? C2' FAD 501 A 1 
HETATM 43 O O2' FAD . . . C 2 41.351 -31.073 -1.217 1 67.12 ? O2' FAD 501 A 1 
HETATM 44 C C3' FAD . . . C 2 40.74 -32.881 0.287 1 66.42 ? C3' FAD 501 A 1 
HETATM 45 O O3' FAD . . . C 2 39.744 -33.26 1.241 1 70.11 ? O3' FAD 501 A 1 
HETATM 46 C C4' FAD . . . C 2 42.112 -32.943 0.935 1 65.41 ? C4' FAD 501 A 1 
HETATM 47 O O4' FAD . . . C 2 43.122 -32.769 -0.06 1 61.84 ? O4' FAD 501 A 1 
HETATM 48 C C5' FAD . . . C 2 42.305 -34.28 1.628 1 64.72 ? C5' FAD 501 A 1 
HETATM 49 O O5' FAD . . . C 2 43.659 -34.391 2.051 1 66.62 ? O5' FAD 501 A 1 
HETATM 50 P P FAD . . . C 2 44.395 -35.816 1.997 1 60.01 ? P FAD 501 A 1 
HETATM 51 O O1P FAD . . . C 2 45.716 -35.663 2.713 1 62.81 ? O1P FAD 501 A 1 
HETATM 52 O O2P FAD . . . C 2 43.399 -36.867 2.426 1 60.8 ? O2P FAD 501 A 1 
HETATM 53 O O3P FAD . . . C 2 44.64 -36.053 0.42 1 57.5 ? O3P FAD 501 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           516 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           53 
#