data_4NEV
#
_model_server_result.job_id            DVwQZVwdap60I6HUO2_Yhg 
_model_server_result.datetime_utc      '2024-11-16 00:35:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nev 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":501}' 
#
_entry.id    4NEV 
#
_exptl.entry_id    4NEV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NEV 
_cell.length_a            117.2 
_cell.length_b            117.2 
_cell.length_c            224.6 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NEV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 170 n n 
PA O2A FAD sing 171 n n 
PA O5B FAD sing 172 n n 
PA O3P FAD sing 173 n n 
O2A HOA2 FAD sing 174 n n 
O5B C5B FAD sing 175 n n 
C5B C4B FAD sing 176 n n 
C5B H51A FAD sing 177 n n 
C5B H52A FAD sing 178 n n 
C4B O4B FAD sing 179 n n 
C4B C3B FAD sing 180 n n 
C4B H4B FAD sing 181 n n 
O4B C1B FAD sing 182 n n 
C3B O3B FAD sing 183 n n 
C3B C2B FAD sing 184 n n 
C3B H3B FAD sing 185 n n 
O3B HO3A FAD sing 186 n n 
C2B O2B FAD sing 187 n n 
C2B C1B FAD sing 188 n n 
C2B H2B FAD sing 189 n n 
O2B HO2A FAD sing 190 n n 
C1B N9A FAD sing 191 n n 
C1B H1B FAD sing 192 n n 
N9A C8A FAD sing 193 n y 
N9A C4A FAD sing 194 n y 
C8A N7A FAD doub 195 n y 
C8A H8A FAD sing 196 n n 
N7A C5A FAD sing 197 n y 
C5A C6A FAD sing 198 n y 
C5A C4A FAD doub 199 n y 
C6A N6A FAD sing 200 n n 
C6A N1A FAD doub 201 n y 
N6A H61A FAD sing 202 n n 
N6A H62A FAD sing 203 n n 
N1A C2A FAD sing 204 n y 
C2A N3A FAD doub 205 n y 
C2A H2A FAD sing 206 n n 
N3A C4A FAD sing 207 n y 
N1 C2 FAD sing 208 n n 
N1 C10 FAD doub 209 n n 
C2 O2 FAD doub 210 n n 
C2 N3 FAD sing 211 n n 
N3 C4 FAD sing 212 n n 
N3 HN3 FAD sing 213 n n 
C4 O4 FAD doub 214 n n 
C4 C4X FAD sing 215 n n 
C4X N5 FAD doub 216 n n 
C4X C10 FAD sing 217 n n 
N5 C5X FAD sing 218 n n 
C5X C6 FAD doub 219 n y 
C5X C9A FAD sing 220 n y 
C6 C7 FAD sing 221 n y 
C6 H6 FAD sing 222 n n 
C7 C7M FAD sing 223 n n 
C7 C8 FAD doub 224 n y 
C7M HM71 FAD sing 225 n n 
C7M HM72 FAD sing 226 n n 
C7M HM73 FAD sing 227 n n 
C8 C8M FAD sing 228 n n 
C8 C9 FAD sing 229 n y 
C8M HM81 FAD sing 230 n n 
C8M HM82 FAD sing 231 n n 
C8M HM83 FAD sing 232 n n 
C9 C9A FAD doub 233 n y 
C9 H9 FAD sing 234 n n 
C9A N10 FAD sing 235 n n 
N10 C10 FAD sing 236 n n 
N10 C1' FAD sing 237 n n 
C1' C2' FAD sing 238 n n 
C1' "H1'1" FAD sing 239 n n 
C1' "H1'2" FAD sing 240 n n 
C2' O2' FAD sing 241 n n 
C2' C3' FAD sing 242 n n 
C2' H2' FAD sing 243 n n 
O2' HO2' FAD sing 244 n n 
C3' O3' FAD sing 245 n n 
C3' C4' FAD sing 246 n n 
C3' H3' FAD sing 247 n n 
O3' HO3' FAD sing 248 n n 
C4' O4' FAD sing 249 n n 
C4' C5' FAD sing 250 n n 
C4' H4' FAD sing 251 n n 
O4' HO4' FAD sing 252 n n 
C5' O5' FAD sing 253 n n 
C5' "H5'1" FAD sing 254 n n 
C5' "H5'2" FAD sing 255 n n 
O5' P FAD sing 256 n n 
P O1P FAD doub 257 n n 
P O2P FAD sing 258 n n 
P O3P FAD sing 259 n n 
O2P HOP2 FAD sing 260 n n 
#
_atom_sites.entry_id                     4NEV 
_atom_sites.fract_transf_matrix[1][1]    0.008532 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008532 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004452 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 501 998 FAD FAD . 
D 3 2JR A 1 502 999 2JR DRG . 
E 4 SO4 A 1 503 2 SO4 SO4 . 
F 4 SO4 A 1 504 3 SO4 SO4 . 
G 4 SO4 A 1 505 7 SO4 SO4 . 
H 2 FAD B 1 501 998 FAD FAD . 
I 3 2JR B 1 502 999 2JR DRG . 
J 4 SO4 B 1 503 1 SO4 SO4 . 
K 4 SO4 B 1 504 4 SO4 SO4 . 
L 4 SO4 B 1 505 5 SO4 SO4 . 
M 4 SO4 B 1 506 6 SO4 SO4 . 
N 4 SO4 B 1 507 8 SO4 SO4 . 
O 5 EPE B 1 508 1 EPE EPE . 
P 3 2JR B 1 509 999 2JR DRG . 
Q 6 HOH A 1 601 2 HOH HOH . 
Q 6 HOH A 2 602 3 HOH HOH . 
Q 6 HOH A 3 603 6 HOH HOH . 
Q 6 HOH A 4 604 8 HOH HOH . 
Q 6 HOH A 5 605 9 HOH HOH . 
Q 6 HOH A 6 606 10 HOH HOH . 
Q 6 HOH A 7 607 11 HOH HOH . 
Q 6 HOH A 8 608 15 HOH HOH . 
Q 6 HOH A 9 609 18 HOH HOH . 
Q 6 HOH A 10 610 19 HOH HOH . 
Q 6 HOH A 11 611 23 HOH HOH . 
Q 6 HOH A 12 612 24 HOH HOH . 
Q 6 HOH A 13 613 28 HOH HOH . 
Q 6 HOH A 14 614 31 HOH HOH . 
Q 6 HOH A 15 615 32 HOH HOH . 
Q 6 HOH A 16 616 33 HOH HOH . 
Q 6 HOH A 17 617 35 HOH HOH . 
Q 6 HOH A 18 618 38 HOH HOH . 
Q 6 HOH A 19 619 39 HOH HOH . 
Q 6 HOH A 20 620 40 HOH HOH . 
Q 6 HOH A 21 621 42 HOH HOH . 
Q 6 HOH A 22 622 43 HOH HOH . 
Q 6 HOH A 23 623 46 HOH HOH . 
Q 6 HOH A 24 624 50 HOH HOH . 
Q 6 HOH A 25 625 53 HOH HOH . 
Q 6 HOH A 26 626 58 HOH HOH . 
Q 6 HOH A 27 627 59 HOH HOH . 
Q 6 HOH A 28 628 62 HOH HOH . 
R 6 HOH B 1 601 1 HOH HOH . 
R 6 HOH B 2 602 4 HOH HOH . 
R 6 HOH B 3 603 5 HOH HOH . 
R 6 HOH B 4 604 7 HOH HOH . 
R 6 HOH B 5 605 12 HOH HOH . 
R 6 HOH B 6 606 13 HOH HOH . 
R 6 HOH B 7 607 14 HOH HOH . 
R 6 HOH B 8 608 16 HOH HOH . 
R 6 HOH B 9 609 17 HOH HOH . 
R 6 HOH B 10 610 20 HOH HOH . 
R 6 HOH B 11 611 21 HOH HOH . 
R 6 HOH B 12 612 22 HOH HOH . 
R 6 HOH B 13 613 25 HOH HOH . 
R 6 HOH B 14 614 26 HOH HOH . 
R 6 HOH B 15 615 27 HOH HOH . 
R 6 HOH B 16 616 29 HOH HOH . 
R 6 HOH B 17 617 30 HOH HOH . 
R 6 HOH B 18 618 34 HOH HOH . 
R 6 HOH B 19 619 36 HOH HOH . 
R 6 HOH B 20 620 37 HOH HOH . 
R 6 HOH B 21 621 41 HOH HOH . 
R 6 HOH B 22 622 44 HOH HOH . 
R 6 HOH B 23 623 45 HOH HOH . 
R 6 HOH B 24 624 47 HOH HOH . 
R 6 HOH B 25 625 48 HOH HOH . 
R 6 HOH B 26 626 49 HOH HOH . 
R 6 HOH B 27 627 51 HOH HOH . 
R 6 HOH B 28 628 52 HOH HOH . 
R 6 HOH B 29 629 54 HOH HOH . 
R 6 HOH B 30 630 55 HOH HOH . 
R 6 HOH B 31 631 56 HOH HOH . 
R 6 HOH B 32 632 57 HOH HOH . 
R 6 HOH B 33 633 60 HOH HOH . 
R 6 HOH B 34 634 61 HOH HOH . 
R 6 HOH B 35 635 63 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . H 2 17.813 7.466 16.566 1 46.14 ? PA FAD 501 B 1 
HETATM 2 O O1A FAD . . . H 2 18.91 8.468 16.327 1 45.15 ? O1A FAD 501 B 1 
HETATM 3 O O2A FAD . . . H 2 17.772 6.153 15.831 1 47.86 ? O2A FAD 501 B 1 
HETATM 4 O O5B FAD . . . H 2 16.418 8.196 16.254 1 46.96 ? O5B FAD 501 B 1 
HETATM 5 C C5B FAD . . . H 2 15.968 9.297 17.037 1 46.22 ? C5B FAD 501 B 1 
HETATM 6 C C4B FAD . . . H 2 14.791 9.943 16.315 1 46.2 ? C4B FAD 501 B 1 
HETATM 7 O O4B FAD . . . H 2 14.163 10.915 17.143 1 44.39 ? O4B FAD 501 B 1 
HETATM 8 C C3B FAD . . . H 2 15.207 10.663 15.038 1 44.08 ? C3B FAD 501 B 1 
HETATM 9 O O3B FAD . . . H 2 14.581 10.032 13.922 1 43.36 ? O3B FAD 501 B 1 
HETATM 10 C C2B FAD . . . H 2 14.732 12.097 15.199 1 45.01 ? C2B FAD 501 B 1 
HETATM 11 O O2B FAD . . . H 2 14.152 12.615 13.995 1 43.91 ? O2B FAD 501 B 1 
HETATM 12 C C1B FAD . . . H 2 13.719 11.995 16.327 1 44.35 ? C1B FAD 501 B 1 
HETATM 13 N N9A FAD . . . H 2 13.585 13.201 17.173 1 47.21 ? N9A FAD 501 B 1 
HETATM 14 C C8A FAD . . . H 2 14.565 14.002 17.638 1 47.4 ? C8A FAD 501 B 1 
HETATM 15 N N7A FAD . . . H 2 14.046 14.988 18.41 1 46.63 ? N7A FAD 501 B 1 
HETATM 16 C C5A FAD . . . H 2 12.713 14.812 18.456 1 48.37 ? C5A FAD 501 B 1 
HETATM 17 C C6A FAD . . . H 2 11.558 15.491 19.085 1 50.46 ? C6A FAD 501 B 1 
HETATM 18 N N6A FAD . . . H 2 11.73 16.591 19.85 1 53.32 ? N6A FAD 501 B 1 
HETATM 19 N N1A FAD . . . H 2 10.327 14.975 18.878 1 50.38 ? N1A FAD 501 B 1 
HETATM 20 C C2A FAD . . . H 2 10.128 13.881 18.121 1 52.41 ? C2A FAD 501 B 1 
HETATM 21 N N3A FAD . . . H 2 11.134 13.219 17.52 1 51.97 ? N3A FAD 501 B 1 
HETATM 22 C C4A FAD . . . H 2 12.42 13.628 17.647 1 49.3 ? C4A FAD 501 B 1 
HETATM 23 N N1 FAD . . . H 2 25.305 2.225 14.71 1 52.77 ? N1 FAD 501 B 1 
HETATM 24 C C2 FAD . . . H 2 25.586 0.93 14.441 1 51.72 ? C2 FAD 501 B 1 
HETATM 25 O O2 FAD . . . H 2 25.218 0.072 15.268 1 53.52 ? O2 FAD 501 B 1 
HETATM 26 N N3 FAD . . . H 2 26.228 0.542 13.322 1 51.32 ? N3 FAD 501 B 1 
HETATM 27 C C4 FAD . . . H 2 26.65 1.422 12.403 1 51.1 ? C4 FAD 501 B 1 
HETATM 28 O O4 FAD . . . H 2 27.244 1.032 11.378 1 52.18 ? O4 FAD 501 B 1 
HETATM 29 C C4X FAD . . . H 2 26.387 2.868 12.62 1 51.5 ? C4X FAD 501 B 1 
HETATM 30 N N5 FAD . . . H 2 26.763 3.83 11.745 1 48.82 ? N5 FAD 501 B 1 
HETATM 31 C C5X FAD . . . H 2 26.491 5.134 11.983 1 46.98 ? C5X FAD 501 B 1 
HETATM 32 C C6 FAD . . . H 2 26.895 6.101 11.07 1 47.44 ? C6 FAD 501 B 1 
HETATM 33 C C7 FAD . . . H 2 26.629 7.448 11.306 1 46.32 ? C7 FAD 501 B 1 
HETATM 34 C C7M FAD . . . H 2 27.06 8.49 10.308 1 48.89 ? C7M FAD 501 B 1 
HETATM 35 C C8 FAD . . . H 2 25.904 7.856 12.537 1 46.73 ? C8 FAD 501 B 1 
HETATM 36 C C8M FAD . . . H 2 25.608 9.308 12.807 1 47.13 ? C8M FAD 501 B 1 
HETATM 37 C C9 FAD . . . H 2 25.508 6.897 13.456 1 47.54 ? C9 FAD 501 B 1 
HETATM 38 C C9A FAD . . . H 2 25.772 5.547 13.224 1 49.12 ? C9A FAD 501 B 1 
HETATM 39 N N10 FAD . . . H 2 25.379 4.553 14.147 1 49.72 ? N10 FAD 501 B 1 
HETATM 40 C C10 FAD . . . H 2 25.671 3.213 13.867 1 51.18 ? C10 FAD 501 B 1 
HETATM 41 C C1' FAD . . . H 2 24.683 4.866 15.389 1 49.62 ? C1' FAD 501 B 1 
HETATM 42 C C2' FAD . . . H 2 23.187 4.706 15.206 1 50.27 ? C2' FAD 501 B 1 
HETATM 43 O O2' FAD . . . H 2 22.732 5.48 14.089 1 48.22 ? O2' FAD 501 B 1 
HETATM 44 C C3' FAD . . . H 2 22.524 5.155 16.498 1 48.3 ? C3' FAD 501 B 1 
HETATM 45 O O3' FAD . . . H 2 23.219 4.522 17.575 1 49.4 ? O3' FAD 501 B 1 
HETATM 46 C C4' FAD . . . H 2 21.046 4.798 16.549 1 48.14 ? C4' FAD 501 B 1 
HETATM 47 O O4' FAD . . . H 2 20.356 5.389 15.437 1 45.21 ? O4' FAD 501 B 1 
HETATM 48 C C5' FAD . . . H 2 20.436 5.289 17.856 1 49.14 ? C5' FAD 501 B 1 
HETATM 49 O O5' FAD . . . H 2 19.035 5.053 17.831 1 48.84 ? O5' FAD 501 B 1 
HETATM 50 P P FAD . . . H 2 18.064 5.809 18.856 1 47.01 ? P FAD 501 B 1 
HETATM 51 O O1P FAD . . . H 2 16.793 4.999 18.931 1 53.06 ? O1P FAD 501 B 1 
HETATM 52 O O2P FAD . . . H 2 18.837 6.109 20.111 1 47.1 ? O2P FAD 501 B 1 
HETATM 53 O O3P FAD . . . H 2 17.737 7.215 18.154 1 47.82 ? O3P FAD 501 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#