data_4NEV # _model_server_result.job_id sY-Q-bmnsYOXRjPpJzh1wA _model_server_result.datetime_utc '2024-11-16 00:44:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nev # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":502}' # _entry.id 4NEV # _exptl.entry_id 4NEV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.508 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1H-indole _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NEV _cell.length_a 117.2 _cell.length_b 117.2 _cell.length_c 224.6 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NEV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 52 1_555 A SG CYS 60 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 B SG CYS 55 B CYS 52 1_555 B SG CYS 60 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C21 H25 N3 S' _chem_comp.formula_weight 351.508 _chem_comp.id 2JR _chem_comp.mon_nstd_flag . _chem_comp.name 5-{5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-2-yl}-1H-indole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAD CAE 2JR doub 1 n y CAD CAC 2JR sing 2 n y CAE CAN 2JR sing 3 n y NAB CAC 2JR sing 4 n y NAB CAA 2JR sing 5 n y CAC CAL 2JR doub 6 n y NAF CAG 2JR sing 7 n y NAF CAO 2JR doub 8 n y CAY CAX 2JR sing 9 n n CAY CAV 2JR sing 10 n n CAN CAO 2JR sing 11 n n CAN CAM 2JR doub 12 n y CAG CAQ 2JR doub 13 n y CAA CAK 2JR doub 14 n y CAO SAP 2JR sing 15 n y CAL CAM 2JR sing 16 n y CAL CAK 2JR sing 17 n y CAX CAW 2JR sing 18 n n CAV NAU 2JR sing 19 n n CAW NAU 2JR sing 20 n n CAQ SAP 2JR sing 21 n y CAQ CAR 2JR sing 22 n n NAU CAR 2JR sing 23 n n CAR CAS 2JR sing 24 n n CAR CAH 2JR sing 25 n n CAS CAT 2JR sing 26 n n CAH CAI 2JR sing 27 n n CAT CAJ 2JR sing 28 n n CAJ CAI 2JR sing 29 n n CAH H1 2JR sing 30 n n CAH H2 2JR sing 31 n n CAI H3 2JR sing 32 n n CAI H4 2JR sing 33 n n CAJ H5 2JR sing 34 n n CAJ H6 2JR sing 35 n n CAT H7 2JR sing 36 n n CAT H8 2JR sing 37 n n CAS H9 2JR sing 38 n n CAS H10 2JR sing 39 n n CAV H12 2JR sing 40 n n CAV H13 2JR sing 41 n n CAY H14 2JR sing 42 n n CAY H15 2JR sing 43 n n CAX H16 2JR sing 44 n n CAX H17 2JR sing 45 n n CAW H18 2JR sing 46 n n CAW H19 2JR sing 47 n n CAG H20 2JR sing 48 n n CAM H21 2JR sing 49 n n CAK H22 2JR sing 50 n n CAA H23 2JR sing 51 n n NAB H24 2JR sing 52 n n CAD H25 2JR sing 53 n n CAE H26 2JR sing 54 n n # _atom_sites.entry_id 4NEV _atom_sites.fract_transf_matrix[1][1] 0.008532 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 998 FAD FAD . D 3 2JR A 1 502 999 2JR DRG . E 4 SO4 A 1 503 2 SO4 SO4 . F 4 SO4 A 1 504 3 SO4 SO4 . G 4 SO4 A 1 505 7 SO4 SO4 . H 2 FAD B 1 501 998 FAD FAD . I 3 2JR B 1 502 999 2JR DRG . J 4 SO4 B 1 503 1 SO4 SO4 . K 4 SO4 B 1 504 4 SO4 SO4 . L 4 SO4 B 1 505 5 SO4 SO4 . M 4 SO4 B 1 506 6 SO4 SO4 . N 4 SO4 B 1 507 8 SO4 SO4 . O 5 EPE B 1 508 1 EPE EPE . P 3 2JR B 1 509 999 2JR DRG . Q 6 HOH A 1 601 2 HOH HOH . Q 6 HOH A 2 602 3 HOH HOH . Q 6 HOH A 3 603 6 HOH HOH . Q 6 HOH A 4 604 8 HOH HOH . Q 6 HOH A 5 605 9 HOH HOH . Q 6 HOH A 6 606 10 HOH HOH . Q 6 HOH A 7 607 11 HOH HOH . Q 6 HOH A 8 608 15 HOH HOH . Q 6 HOH A 9 609 18 HOH HOH . Q 6 HOH A 10 610 19 HOH HOH . Q 6 HOH A 11 611 23 HOH HOH . Q 6 HOH A 12 612 24 HOH HOH . Q 6 HOH A 13 613 28 HOH HOH . Q 6 HOH A 14 614 31 HOH HOH . Q 6 HOH A 15 615 32 HOH HOH . Q 6 HOH A 16 616 33 HOH HOH . Q 6 HOH A 17 617 35 HOH HOH . Q 6 HOH A 18 618 38 HOH HOH . Q 6 HOH A 19 619 39 HOH HOH . Q 6 HOH A 20 620 40 HOH HOH . Q 6 HOH A 21 621 42 HOH HOH . Q 6 HOH A 22 622 43 HOH HOH . Q 6 HOH A 23 623 46 HOH HOH . Q 6 HOH A 24 624 50 HOH HOH . Q 6 HOH A 25 625 53 HOH HOH . Q 6 HOH A 26 626 58 HOH HOH . Q 6 HOH A 27 627 59 HOH HOH . Q 6 HOH A 28 628 62 HOH HOH . R 6 HOH B 1 601 1 HOH HOH . R 6 HOH B 2 602 4 HOH HOH . R 6 HOH B 3 603 5 HOH HOH . R 6 HOH B 4 604 7 HOH HOH . R 6 HOH B 5 605 12 HOH HOH . R 6 HOH B 6 606 13 HOH HOH . R 6 HOH B 7 607 14 HOH HOH . R 6 HOH B 8 608 16 HOH HOH . R 6 HOH B 9 609 17 HOH HOH . R 6 HOH B 10 610 20 HOH HOH . R 6 HOH B 11 611 21 HOH HOH . R 6 HOH B 12 612 22 HOH HOH . R 6 HOH B 13 613 25 HOH HOH . R 6 HOH B 14 614 26 HOH HOH . R 6 HOH B 15 615 27 HOH HOH . R 6 HOH B 16 616 29 HOH HOH . R 6 HOH B 17 617 30 HOH HOH . R 6 HOH B 18 618 34 HOH HOH . R 6 HOH B 19 619 36 HOH HOH . R 6 HOH B 20 620 37 HOH HOH . R 6 HOH B 21 621 41 HOH HOH . R 6 HOH B 22 622 44 HOH HOH . R 6 HOH B 23 623 45 HOH HOH . R 6 HOH B 24 624 47 HOH HOH . R 6 HOH B 25 625 48 HOH HOH . R 6 HOH B 26 626 49 HOH HOH . R 6 HOH B 27 627 51 HOH HOH . R 6 HOH B 28 628 52 HOH HOH . R 6 HOH B 29 629 54 HOH HOH . R 6 HOH B 30 630 55 HOH HOH . R 6 HOH B 31 631 56 HOH HOH . R 6 HOH B 32 632 57 HOH HOH . R 6 HOH B 33 633 60 HOH HOH . R 6 HOH B 34 634 61 HOH HOH . R 6 HOH B 35 635 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAH 2JR . . . I 3 9.786 -5.877 13.475 1 93.21 ? CAH 2JR 502 B 1 HETATM 2 C CAI 2JR . . . I 3 9.977 -7.273 13.052 1 94.3 ? CAI 2JR 502 B 1 HETATM 3 C CAJ 2JR . . . I 3 11.432 -7.591 13.214 1 94.92 ? CAJ 2JR 502 B 1 HETATM 4 C CAT 2JR . . . I 3 12.139 -7.028 12.059 1 94.7 ? CAT 2JR 502 B 1 HETATM 5 C CAS 2JR . . . I 3 11.924 -5.498 11.989 1 94.41 ? CAS 2JR 502 B 1 HETATM 6 C CAR 2JR . . . I 3 10.556 -4.912 12.523 1 93.62 ? CAR 2JR 502 B 1 HETATM 7 N NAU 2JR . . . I 3 10.854 -3.69 13.315 1 92.97 ? NAU 2JR 502 B 1 HETATM 8 C CAV 2JR . . . I 3 9.681 -3.012 13.869 1 91.42 ? CAV 2JR 502 B 1 HETATM 9 C CAY 2JR . . . I 3 10.429 -2.051 14.73 1 91.48 ? CAY 2JR 502 B 1 HETATM 10 C CAX 2JR . . . I 3 11.422 -1.484 13.701 1 92.1 ? CAX 2JR 502 B 1 HETATM 11 C CAW 2JR . . . I 3 11.531 -2.577 12.636 1 92.92 ? CAW 2JR 502 B 1 HETATM 12 C CAQ 2JR . . . I 3 9.633 -4.573 11.307 1 89.84 ? CAQ 2JR 502 B 1 HETATM 13 S SAP 2JR . . . I 3 7.999 -4.605 11.346 1 86.59 ? SAP 2JR 502 B 1 HETATM 14 C CAG 2JR . . . I 3 10.029 -4.214 10.071 1 88.3 ? CAG 2JR 502 B 1 HETATM 15 N NAF 2JR . . . I 3 8.997 -3.99 9.229 1 87.64 ? NAF 2JR 502 B 1 HETATM 16 C CAO 2JR . . . I 3 7.793 -4.165 9.785 1 89.85 ? CAO 2JR 502 B 1 HETATM 17 C CAN 2JR . . . I 3 6.614 -4.008 9.169 1 89.13 ? CAN 2JR 502 B 1 HETATM 18 C CAM 2JR . . . I 3 6.525 -3.393 7.922 1 90.09 ? CAM 2JR 502 B 1 HETATM 19 C CAL 2JR . . . I 3 5.339 -3.247 7.322 1 92.06 ? CAL 2JR 502 B 1 HETATM 20 C CAK 2JR . . . I 3 5.011 -2.704 6.151 1 95.01 ? CAK 2JR 502 B 1 HETATM 21 C CAA 2JR . . . I 3 3.693 -2.801 5.998 1 94.61 ? CAA 2JR 502 B 1 HETATM 22 N NAB 2JR . . . I 3 3.201 -3.404 7.076 1 93.4 ? NAB 2JR 502 B 1 HETATM 23 C CAC 2JR . . . I 3 4.213 -3.684 7.894 1 92.08 ? CAC 2JR 502 B 1 HETATM 24 C CAD 2JR . . . I 3 4.234 -4.28 9.086 1 90.45 ? CAD 2JR 502 B 1 HETATM 25 C CAE 2JR . . . I 3 5.437 -4.461 9.755 1 89.69 ? CAE 2JR 502 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 25 #