data_4NFV
#
_model_server_result.job_id            rRd-bwGZ07V2f2QONw4vMA 
_model_server_result.datetime_utc      '2024-10-12 15:27:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nfv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    4NFV 
#
_exptl.entry_id    4NFV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NFV 
_cell.length_a            79.607 
_cell.length_b            79.607 
_cell.length_c            37.893 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NFV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A OE1 GLU 35 A GLU 35 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 A OD1 ASN 46 A ASN 46 1_555 B MN MN . A MN 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc3 A OD2 ASP 52 A ASP 52 1_555 B MN MN . A MN 201 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc4 A OD2 ASP 52 A ASP 52 1_555 B MN MN . A MN 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc5 A OD2 ASP 52 A ASP 52 1_555 B MN MN . A MN 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc6 B MN MN . A MN 201 1_555 E O HOH . A HOH 301 1_555 ? C ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc7 B MN MN . A MN 201 1_555 E O HOH . A HOH 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc8 B MN MN . A MN 201 1_555 E O HOH . A HOH 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc9 B MN MN . A MN 201 1_555 E O HOH . A HOH 303 1_555 ? C ? ? ? ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc10 B MN MN . A MN 201 1_555 E O HOH . A HOH 304 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc11 B MN MN . A MN 201 1_555 E O HOH . A HOH 305 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc12 B MN MN . A MN 201 1_555 E O HOH . A HOH 305 1_555 ? C ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc13 C MN MN . A MN 202 1_555 E O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc14 C MN MN . A MN 202 1_555 E O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? 
metalc ? metalc15 C MN MN . A MN 202 1_555 E O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? 
metalc ? metalc16 C MN MN . A MN 202 1_555 E O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4NFV 
_atom_sites.fract_transf_matrix[1][1]    0.012562 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012562 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02639 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 201 201 MN MN . 
C 2 MN A 1 202 202 MN MN . 
D 3 CL A 1 203 203 CL CL . 
E 4 HOH A 1 301 301 HOH HOH . 
E 4 HOH A 2 302 302 HOH HOH . 
E 4 HOH A 3 303 303 HOH HOH . 
E 4 HOH A 4 304 304 HOH HOH . 
E 4 HOH A 5 305 305 HOH HOH . 
E 4 HOH A 6 306 306 HOH HOH . 
E 4 HOH A 7 307 307 HOH HOH . 
E 4 HOH A 8 308 309 HOH HOH . 
E 4 HOH A 9 309 310 HOH HOH . 
E 4 HOH A 10 310 311 HOH HOH . 
E 4 HOH A 11 311 312 HOH HOH . 
E 4 HOH A 12 312 313 HOH HOH . 
E 4 HOH A 13 313 314 HOH HOH . 
E 4 HOH A 14 314 315 HOH HOH . 
E 4 HOH A 15 315 316 HOH HOH . 
E 4 HOH A 16 316 317 HOH HOH . 
E 4 HOH A 17 317 318 HOH HOH . 
E 4 HOH A 18 318 319 HOH HOH . 
E 4 HOH A 19 319 320 HOH HOH . 
E 4 HOH A 20 320 321 HOH HOH . 
E 4 HOH A 21 321 322 HOH HOH . 
E 4 HOH A 22 322 323 HOH HOH . 
E 4 HOH A 23 323 324 HOH HOH . 
E 4 HOH A 24 324 325 HOH HOH . 
E 4 HOH A 25 325 326 HOH HOH . 
E 4 HOH A 26 326 327 HOH HOH . 
E 4 HOH A 27 327 328 HOH HOH . 
E 4 HOH A 28 328 329 HOH HOH . 
E 4 HOH A 29 329 330 HOH HOH . 
E 4 HOH A 30 330 331 HOH HOH . 
E 4 HOH A 31 331 332 HOH HOH . 
E 4 HOH A 32 332 333 HOH HOH . 
E 4 HOH A 33 333 334 HOH HOH . 
E 4 HOH A 34 334 335 HOH HOH . 
E 4 HOH A 35 335 336 HOH HOH . 
E 4 HOH A 36 336 337 HOH HOH . 
E 4 HOH A 37 337 338 HOH HOH . 
E 4 HOH A 38 338 339 HOH HOH . 
E 4 HOH A 39 339 339 HOH HOH . 
E 4 HOH A 40 340 341 HOH HOH . 
E 4 HOH A 41 341 342 HOH HOH . 
E 4 HOH A 42 342 343 HOH HOH . 
E 4 HOH A 43 343 344 HOH HOH . 
E 4 HOH A 44 344 345 HOH HOH . 
E 4 HOH A 45 345 346 HOH HOH . 
E 4 HOH A 46 346 349 HOH HOH . 
E 4 HOH A 47 347 350 HOH HOH . 
E 4 HOH A 48 348 351 HOH HOH . 
E 4 HOH A 49 349 352 HOH HOH . 
E 4 HOH A 50 350 353 HOH HOH . 
E 4 HOH A 51 351 354 HOH HOH . 
E 4 HOH A 52 352 355 HOH HOH . 
E 4 HOH A 53 353 356 HOH HOH . 
E 4 HOH A 54 354 357 HOH HOH . 
E 4 HOH A 55 355 359 HOH HOH . 
E 4 HOH A 56 356 360 HOH HOH . 
E 4 HOH A 57 357 361 HOH HOH . 
E 4 HOH A 58 358 362 HOH HOH . 
E 4 HOH A 59 359 364 HOH HOH . 
E 4 HOH A 60 360 365 HOH HOH . 
E 4 HOH A 61 361 367 HOH HOH . 
E 4 HOH A 62 362 368 HOH HOH . 
E 4 HOH A 63 363 370 HOH HOH . 
E 4 HOH A 64 364 371 HOH HOH . 
E 4 HOH A 65 365 372 HOH HOH . 
E 4 HOH A 66 366 373 HOH HOH . 
E 4 HOH A 67 367 375 HOH HOH . 
E 4 HOH A 68 368 376 HOH HOH . 
E 4 HOH A 69 369 377 HOH HOH . 
E 4 HOH A 70 370 379 HOH HOH . 
E 4 HOH A 71 371 380 HOH HOH . 
E 4 HOH A 72 372 382 HOH HOH . 
E 4 HOH A 73 373 384 HOH HOH . 
E 4 HOH A 74 374 387 HOH HOH . 
E 4 HOH A 75 375 389 HOH HOH . 
E 4 HOH A 76 376 391 HOH HOH . 
E 4 HOH A 77 377 392 HOH HOH . 
E 4 HOH A 78 378 394 HOH HOH . 
E 4 HOH A 79 379 395 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 MN MN MN . A . B 2 -8.089 55.396 3.106 0.3 24.6 ? MN MN 201 A 1 
HETATM 2 MN MN MN . B . B 2 -10.37 55.584 3.605 0.34 22.75 ? MN MN 201 A 1 
HETATM 3 MN MN MN . C . B 2 -9.526 55.981 1.625 0.24 26.3 ? MN MN 201 A 1 
#
_model_server_stats.io_time_ms              81 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           3 
#