data_4NFY
#
_model_server_result.job_id            KbVbXEmwD4vMA7ME1rVxpQ 
_model_server_result.datetime_utc      '2024-10-19 20:11:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nfy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    4NFY 
#
_exptl.entry_id    4NFY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NFY 
_cell.length_a            85.906 
_cell.length_b            85.906 
_cell.length_c            84.492 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NFY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 306 n n 
C C2 TRS sing 307 n n 
C C3 TRS sing 308 n n 
C N TRS sing 309 n n 
C1 O1 TRS sing 310 n n 
C1 H11 TRS sing 311 n n 
C1 H12 TRS sing 312 n n 
C2 O2 TRS sing 313 n n 
C2 H21 TRS sing 314 n n 
C2 H22 TRS sing 315 n n 
C3 O3 TRS sing 316 n n 
C3 H31 TRS sing 317 n n 
C3 H32 TRS sing 318 n n 
N HN1 TRS sing 319 n n 
N HN2 TRS sing 320 n n 
N HN3 TRS sing 321 n n 
O1 HO1 TRS sing 322 n n 
O2 HO2 TRS sing 323 n n 
O3 HO3 TRS sing 324 n n 
#
_atom_sites.entry_id                     4NFY 
_atom_sites.fract_transf_matrix[1][1]    0.011641 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011641 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011835 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TRS A 1 401 1 TRS TRS . 
D 2 TRS B 1 401 1 TRS TRS . 
E 3 HOH A 1 501 501 HOH HOH . 
E 3 HOH A 2 502 502 HOH HOH . 
E 3 HOH A 3 503 503 HOH HOH . 
E 3 HOH A 4 504 505 HOH HOH . 
E 3 HOH A 5 505 506 HOH HOH . 
E 3 HOH A 6 506 507 HOH HOH . 
E 3 HOH A 7 507 508 HOH HOH . 
E 3 HOH A 8 508 509 HOH HOH . 
E 3 HOH A 9 509 510 HOH HOH . 
E 3 HOH A 10 510 511 HOH HOH . 
E 3 HOH A 11 511 512 HOH HOH . 
E 3 HOH A 12 512 514 HOH HOH . 
E 3 HOH A 13 513 515 HOH HOH . 
E 3 HOH A 14 514 516 HOH HOH . 
E 3 HOH A 15 515 517 HOH HOH . 
E 3 HOH A 16 516 518 HOH HOH . 
E 3 HOH A 17 517 519 HOH HOH . 
E 3 HOH A 18 518 520 HOH HOH . 
E 3 HOH A 19 519 521 HOH HOH . 
E 3 HOH A 20 520 522 HOH HOH . 
E 3 HOH A 21 521 523 HOH HOH . 
E 3 HOH A 22 522 524 HOH HOH . 
E 3 HOH A 23 523 525 HOH HOH . 
E 3 HOH A 24 524 526 HOH HOH . 
E 3 HOH A 25 525 527 HOH HOH . 
E 3 HOH A 26 526 528 HOH HOH . 
E 3 HOH A 27 527 529 HOH HOH . 
E 3 HOH A 28 528 530 HOH HOH . 
E 3 HOH A 29 529 531 HOH HOH . 
E 3 HOH A 30 530 534 HOH HOH . 
E 3 HOH A 31 531 535 HOH HOH . 
E 3 HOH A 32 532 536 HOH HOH . 
E 3 HOH A 33 533 537 HOH HOH . 
E 3 HOH A 34 534 538 HOH HOH . 
E 3 HOH A 35 535 539 HOH HOH . 
E 3 HOH A 36 536 540 HOH HOH . 
E 3 HOH A 37 537 541 HOH HOH . 
E 3 HOH A 38 538 542 HOH HOH . 
E 3 HOH A 39 539 544 HOH HOH . 
E 3 HOH A 40 540 546 HOH HOH . 
E 3 HOH A 41 541 547 HOH HOH . 
E 3 HOH A 42 542 548 HOH HOH . 
E 3 HOH A 43 543 549 HOH HOH . 
E 3 HOH A 44 544 551 HOH HOH . 
E 3 HOH A 45 545 552 HOH HOH . 
E 3 HOH A 46 546 553 HOH HOH . 
E 3 HOH A 47 547 555 HOH HOH . 
E 3 HOH A 48 548 558 HOH HOH . 
E 3 HOH A 49 549 502 HOH HOH . 
E 3 HOH A 50 550 2 HOH HOH . 
E 3 HOH A 51 551 20 HOH HOH . 
E 3 HOH A 52 552 29 HOH HOH . 
E 3 HOH A 53 553 42 HOH HOH . 
E 3 HOH A 54 554 55 HOH HOH . 
E 3 HOH A 55 555 62 HOH HOH . 
E 3 HOH A 56 556 64 HOH HOH . 
E 3 HOH A 57 557 84 HOH HOH . 
E 3 HOH A 58 558 87 HOH HOH . 
E 3 HOH A 59 559 215 HOH HOH . 
E 3 HOH A 60 560 1 HOH HOH . 
E 3 HOH A 61 561 5 HOH HOH . 
E 3 HOH A 62 562 14 HOH HOH . 
E 3 HOH A 63 563 21 HOH HOH . 
E 3 HOH A 64 564 25 HOH HOH . 
E 3 HOH A 65 565 55 HOH HOH . 
E 3 HOH A 66 566 60 HOH HOH . 
F 3 HOH B 1 501 513 HOH HOH . 
F 3 HOH B 2 502 501 HOH HOH . 
F 3 HOH B 3 503 503 HOH HOH . 
F 3 HOH B 4 504 504 HOH HOH . 
F 3 HOH B 5 505 505 HOH HOH . 
F 3 HOH B 6 506 506 HOH HOH . 
F 3 HOH B 7 507 507 HOH HOH . 
F 3 HOH B 8 508 508 HOH HOH . 
F 3 HOH B 9 509 509 HOH HOH . 
F 3 HOH B 10 510 510 HOH HOH . 
F 3 HOH B 11 511 511 HOH HOH . 
F 3 HOH B 12 512 512 HOH HOH . 
F 3 HOH B 13 513 513 HOH HOH . 
F 3 HOH B 14 514 514 HOH HOH . 
F 3 HOH B 15 515 515 HOH HOH . 
F 3 HOH B 16 516 516 HOH HOH . 
F 3 HOH B 17 517 518 HOH HOH . 
F 3 HOH B 18 518 519 HOH HOH . 
F 3 HOH B 19 519 520 HOH HOH . 
F 3 HOH B 20 520 521 HOH HOH . 
F 3 HOH B 21 521 522 HOH HOH . 
F 3 HOH B 22 522 523 HOH HOH . 
F 3 HOH B 23 523 524 HOH HOH . 
F 3 HOH B 24 524 525 HOH HOH . 
F 3 HOH B 25 525 526 HOH HOH . 
F 3 HOH B 26 526 527 HOH HOH . 
F 3 HOH B 27 527 528 HOH HOH . 
F 3 HOH B 28 528 529 HOH HOH . 
F 3 HOH B 29 529 530 HOH HOH . 
F 3 HOH B 30 530 531 HOH HOH . 
F 3 HOH B 31 531 532 HOH HOH . 
F 3 HOH B 32 532 533 HOH HOH . 
F 3 HOH B 33 533 534 HOH HOH . 
F 3 HOH B 34 534 535 HOH HOH . 
F 3 HOH B 35 535 536 HOH HOH . 
F 3 HOH B 36 536 537 HOH HOH . 
F 3 HOH B 37 537 538 HOH HOH . 
F 3 HOH B 38 538 539 HOH HOH . 
F 3 HOH B 39 539 540 HOH HOH . 
F 3 HOH B 40 540 541 HOH HOH . 
F 3 HOH B 41 541 542 HOH HOH . 
F 3 HOH B 42 542 543 HOH HOH . 
F 3 HOH B 43 543 544 HOH HOH . 
F 3 HOH B 44 544 545 HOH HOH . 
F 3 HOH B 45 545 546 HOH HOH . 
F 3 HOH B 46 546 547 HOH HOH . 
F 3 HOH B 47 547 548 HOH HOH . 
F 3 HOH B 48 548 549 HOH HOH . 
F 3 HOH B 49 549 550 HOH HOH . 
F 3 HOH B 50 550 551 HOH HOH . 
F 3 HOH B 51 551 552 HOH HOH . 
F 3 HOH B 52 552 553 HOH HOH . 
F 3 HOH B 53 553 554 HOH HOH . 
F 3 HOH B 54 554 556 HOH HOH . 
F 3 HOH B 55 555 557 HOH HOH . 
F 3 HOH B 56 556 558 HOH HOH . 
F 3 HOH B 57 557 3 HOH HOH . 
F 3 HOH B 58 558 11 HOH HOH . 
F 3 HOH B 59 559 26 HOH HOH . 
F 3 HOH B 60 560 27 HOH HOH . 
F 3 HOH B 61 561 43 HOH HOH . 
F 3 HOH B 62 562 59 HOH HOH . 
F 3 HOH B 63 563 68 HOH HOH . 
F 3 HOH B 64 564 90 HOH HOH . 
F 3 HOH B 65 565 94 HOH HOH . 
F 3 HOH B 66 566 105 HOH HOH . 
F 3 HOH B 67 567 180 HOH HOH . 
F 3 HOH B 68 568 48 HOH HOH . 
F 3 HOH B 69 569 204 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . C 2 23.957 12.727 24.421 1 74.46 ? C TRS 401 A 1 
HETATM 2 C C1 TRS . . . C 2 25.052 13.19 25.384 1 74.37 ? C1 TRS 401 A 1 
HETATM 3 C C2 TRS . . . C 2 22.606 12.605 25.15 1 74.6 ? C2 TRS 401 A 1 
HETATM 4 C C3 TRS . . . C 2 24.329 11.387 23.79 1 74.82 ? C3 TRS 401 A 1 
HETATM 5 N N TRS . . . C 2 23.89 13.743 23.332 1 76.47 ? N TRS 401 A 1 
HETATM 6 O O1 TRS . . . C 2 24.721 14.449 25.989 1 74.9 ? O1 TRS 401 A 1 
HETATM 7 O O2 TRS . . . C 2 21.61 11.858 24.417 1 67.13 ? O2 TRS 401 A 1 
HETATM 8 O O3 TRS . . . C 2 23.219 10.864 23.043 1 75.16 ? O3 TRS 401 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           357 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#