data_4NI0 # _model_server_result.job_id NqKXzEqKJBE4Gkf9rlfWFg _model_server_result.datetime_utc '2024-11-29 14:43:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ni0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":205}' # _entry.id 4NI0 # _exptl.entry_id 4NI0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.138 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TOLUENE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NI0 _cell.length_a 62.0636 _cell.length_b 62.0636 _cell.length_c 173.8816 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/4 0 -1 0 -1 0 0 0 0 -1 62.0636 62.0636 43.4704 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 93 B CYS 93 1_555 M S1 2P3 . B 2P3 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? covale ? covale2 B SG CYS 112 B CYS 112 1_555 N S1 2P3 . B 2P3 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.781 ? metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 D FE HEM . A HEM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc2 C C CMO . A CMO 201 1_555 D FE HEM . A HEM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc3 B NE2 HIS 92 B HIS 92 1_555 L FE HEM . B HEM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 K C CMO . B CMO 201 1_555 L FE HEM . B HEM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? # _chem_comp.formula 'C7 H8' _chem_comp.formula_weight 92.138 _chem_comp.id MBN _chem_comp.mon_nstd_flag . _chem_comp.name TOLUENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 MBN sing 307 n n C H1 MBN sing 308 n n C H2A MBN sing 309 n n C H3A MBN sing 310 n n C1 C2 MBN doub 311 n y C1 C6 MBN sing 312 n y C2 C3 MBN sing 313 n y C2 H2 MBN sing 314 n n C3 C4 MBN doub 315 n y C3 H3 MBN sing 316 n n C4 C5 MBN sing 317 n y C4 H4 MBN sing 318 n n C5 C6 MBN doub 319 n y C5 H5 MBN sing 320 n n C6 H6 MBN sing 321 n n # _atom_sites.entry_id 4NI0 _atom_sites.fract_transf_matrix[1][1] 0.016113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016113 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CMO A 1 201 142 CMO CMO . D 4 HEM A 1 202 143 HEM HEM . E 5 2P3 A 1 203 3 2P3 2JX . F 5 2P3 A 1 204 4 2P3 2JX . G 6 MBN A 1 205 5 MBN MBN . H 6 MBN A 1 206 6 MBN MBN . I 6 MBN A 1 207 7 MBN MBN . J 7 PO4 A 1 208 10 PO4 PO4 . K 3 CMO B 1 201 147 CMO CMO . L 4 HEM B 1 202 148 HEM HEM . M 5 2P3 B 1 203 1 2P3 2JX . N 5 2P3 B 1 204 2 2P3 2JX . O 7 PO4 B 1 205 8 PO4 PO4 . P 7 PO4 B 1 206 9 PO4 PO4 . Q 8 HOH A 1 301 3 HOH HOH . Q 8 HOH A 2 302 4 HOH HOH . Q 8 HOH A 3 303 7 HOH HOH . Q 8 HOH A 4 304 8 HOH HOH . Q 8 HOH A 5 305 9 HOH HOH . Q 8 HOH A 6 306 10 HOH HOH . Q 8 HOH A 7 307 11 HOH HOH . Q 8 HOH A 8 308 12 HOH HOH . Q 8 HOH A 9 309 16 HOH HOH . Q 8 HOH A 10 310 17 HOH HOH . Q 8 HOH A 11 311 18 HOH HOH . Q 8 HOH A 12 312 19 HOH HOH . Q 8 HOH A 13 313 20 HOH HOH . Q 8 HOH A 14 314 21 HOH HOH . Q 8 HOH A 15 315 22 HOH HOH . Q 8 HOH A 16 316 34 HOH HOH . Q 8 HOH A 17 317 35 HOH HOH . Q 8 HOH A 18 318 36 HOH HOH . Q 8 HOH A 19 319 37 HOH HOH . Q 8 HOH A 20 320 38 HOH HOH . Q 8 HOH A 21 321 39 HOH HOH . Q 8 HOH A 22 322 40 HOH HOH . Q 8 HOH A 23 323 41 HOH HOH . Q 8 HOH A 24 324 42 HOH HOH . Q 8 HOH A 25 325 43 HOH HOH . Q 8 HOH A 26 326 50 HOH HOH . Q 8 HOH A 27 327 51 HOH HOH . Q 8 HOH A 28 328 52 HOH HOH . Q 8 HOH A 29 329 53 HOH HOH . Q 8 HOH A 30 330 54 HOH HOH . Q 8 HOH A 31 331 59 HOH HOH . Q 8 HOH A 32 332 62 HOH HOH . Q 8 HOH A 33 333 63 HOH HOH . Q 8 HOH A 34 334 64 HOH HOH . Q 8 HOH A 35 335 65 HOH HOH . Q 8 HOH A 36 336 66 HOH HOH . Q 8 HOH A 37 337 67 HOH HOH . Q 8 HOH A 38 338 68 HOH HOH . Q 8 HOH A 39 339 69 HOH HOH . Q 8 HOH A 40 340 70 HOH HOH . Q 8 HOH A 41 341 71 HOH HOH . Q 8 HOH A 42 342 72 HOH HOH . Q 8 HOH A 43 343 73 HOH HOH . Q 8 HOH A 44 344 74 HOH HOH . Q 8 HOH A 45 345 75 HOH HOH . Q 8 HOH A 46 346 76 HOH HOH . Q 8 HOH A 47 347 77 HOH HOH . Q 8 HOH A 48 348 79 HOH HOH . Q 8 HOH A 49 349 85 HOH HOH . Q 8 HOH A 50 350 90 HOH HOH . Q 8 HOH A 51 351 92 HOH HOH . Q 8 HOH A 52 352 93 HOH HOH . Q 8 HOH A 53 353 94 HOH HOH . Q 8 HOH A 54 354 95 HOH HOH . Q 8 HOH A 55 355 96 HOH HOH . Q 8 HOH A 56 356 105 HOH HOH . Q 8 HOH A 57 357 106 HOH HOH . Q 8 HOH A 58 358 107 HOH HOH . Q 8 HOH A 59 359 108 HOH HOH . Q 8 HOH A 60 360 109 HOH HOH . Q 8 HOH A 61 361 110 HOH HOH . Q 8 HOH A 62 362 111 HOH HOH . Q 8 HOH A 63 363 112 HOH HOH . Q 8 HOH A 64 364 113 HOH HOH . Q 8 HOH A 65 365 119 HOH HOH . Q 8 HOH A 66 366 120 HOH HOH . Q 8 HOH A 67 367 121 HOH HOH . Q 8 HOH A 68 368 122 HOH HOH . Q 8 HOH A 69 369 123 HOH HOH . Q 8 HOH A 70 370 124 HOH HOH . Q 8 HOH A 71 371 125 HOH HOH . Q 8 HOH A 72 372 126 HOH HOH . Q 8 HOH A 73 373 127 HOH HOH . Q 8 HOH A 74 374 128 HOH HOH . Q 8 HOH A 75 375 129 HOH HOH . Q 8 HOH A 76 376 130 HOH HOH . Q 8 HOH A 77 377 131 HOH HOH . Q 8 HOH A 78 378 132 HOH HOH . Q 8 HOH A 79 379 133 HOH HOH . Q 8 HOH A 80 380 136 HOH HOH . Q 8 HOH A 81 381 138 HOH HOH . Q 8 HOH A 82 382 154 HOH HOH . Q 8 HOH A 83 383 155 HOH HOH . Q 8 HOH A 84 384 156 HOH HOH . Q 8 HOH A 85 385 157 HOH HOH . Q 8 HOH A 86 386 158 HOH HOH . R 8 HOH B 1 301 1 HOH HOH . R 8 HOH B 2 302 2 HOH HOH . R 8 HOH B 3 303 5 HOH HOH . R 8 HOH B 4 304 6 HOH HOH . R 8 HOH B 5 305 13 HOH HOH . R 8 HOH B 6 306 14 HOH HOH . R 8 HOH B 7 307 15 HOH HOH . R 8 HOH B 8 308 23 HOH HOH . R 8 HOH B 9 309 24 HOH HOH . R 8 HOH B 10 310 25 HOH HOH . R 8 HOH B 11 311 26 HOH HOH . R 8 HOH B 12 312 27 HOH HOH . R 8 HOH B 13 313 28 HOH HOH . R 8 HOH B 14 314 29 HOH HOH . R 8 HOH B 15 315 30 HOH HOH . R 8 HOH B 16 316 31 HOH HOH . R 8 HOH B 17 317 32 HOH HOH . R 8 HOH B 18 318 33 HOH HOH . R 8 HOH B 19 319 44 HOH HOH . R 8 HOH B 20 320 45 HOH HOH . R 8 HOH B 21 321 46 HOH HOH . R 8 HOH B 22 322 47 HOH HOH . R 8 HOH B 23 323 48 HOH HOH . R 8 HOH B 24 324 49 HOH HOH . R 8 HOH B 25 325 55 HOH HOH . R 8 HOH B 26 326 56 HOH HOH . R 8 HOH B 27 327 57 HOH HOH . R 8 HOH B 28 328 58 HOH HOH . R 8 HOH B 29 329 60 HOH HOH . R 8 HOH B 30 330 61 HOH HOH . R 8 HOH B 31 331 78 HOH HOH . R 8 HOH B 32 332 80 HOH HOH . R 8 HOH B 33 333 81 HOH HOH . R 8 HOH B 34 334 82 HOH HOH . R 8 HOH B 35 335 83 HOH HOH . R 8 HOH B 36 336 84 HOH HOH . R 8 HOH B 37 337 86 HOH HOH . R 8 HOH B 38 338 87 HOH HOH . R 8 HOH B 39 339 88 HOH HOH . R 8 HOH B 40 340 89 HOH HOH . R 8 HOH B 41 341 91 HOH HOH . R 8 HOH B 42 342 97 HOH HOH . R 8 HOH B 43 343 98 HOH HOH . R 8 HOH B 44 344 99 HOH HOH . R 8 HOH B 45 345 100 HOH HOH . R 8 HOH B 46 346 101 HOH HOH . R 8 HOH B 47 347 102 HOH HOH . R 8 HOH B 48 348 103 HOH HOH . R 8 HOH B 49 349 104 HOH HOH . R 8 HOH B 50 350 114 HOH HOH . R 8 HOH B 51 351 115 HOH HOH . R 8 HOH B 52 352 116 HOH HOH . R 8 HOH B 53 353 117 HOH HOH . R 8 HOH B 54 354 118 HOH HOH . R 8 HOH B 55 355 134 HOH HOH . R 8 HOH B 56 356 135 HOH HOH . R 8 HOH B 57 357 137 HOH HOH . R 8 HOH B 58 358 139 HOH HOH . R 8 HOH B 59 359 140 HOH HOH . R 8 HOH B 60 360 141 HOH HOH . R 8 HOH B 61 361 142 HOH HOH . R 8 HOH B 62 362 143 HOH HOH . R 8 HOH B 63 363 144 HOH HOH . R 8 HOH B 64 364 145 HOH HOH . R 8 HOH B 65 365 146 HOH HOH . R 8 HOH B 66 366 147 HOH HOH . R 8 HOH B 67 367 148 HOH HOH . R 8 HOH B 68 368 149 HOH HOH . R 8 HOH B 69 369 150 HOH HOH . R 8 HOH B 70 370 151 HOH HOH . R 8 HOH B 71 371 152 HOH HOH . R 8 HOH B 72 372 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C MBN . . . G 6 56.372 36.047 32.992 1 39.97 ? C MBN 205 A 1 HETATM 2 C C1 MBN . . . G 6 55.898 37.095 33.985 1 51.59 ? C1 MBN 205 A 1 HETATM 3 C C2 MBN . . . G 6 56.472 38.401 33.966 1 45.59 ? C2 MBN 205 A 1 HETATM 4 C C3 MBN . . . G 6 56.047 39.392 34.895 1 42.02 ? C3 MBN 205 A 1 HETATM 5 C C4 MBN . . . G 6 55.039 39.075 35.851 1 39.2 ? C4 MBN 205 A 1 HETATM 6 C C5 MBN . . . G 6 54.461 37.777 35.871 1 56.64 ? C5 MBN 205 A 1 HETATM 7 C C6 MBN . . . G 6 54.886 36.786 34.943 1 58.39 ? C6 MBN 205 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #