data_4NK9 # _model_server_result.job_id VFK-N6sMoaE1lkElXq1HDg _model_server_result.datetime_utc '2024-11-21 23:08:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nk9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":802}' # _entry.id 4NK9 # _exptl.entry_id 4NK9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 435.479 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~4~-{5-[2-(3,5-dimethoxyphenyl)ethyl]-1H-pyrazol-3-yl}-N~2~-[(3-methyl-1,2-oxazol-5-yl)methyl]pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.43 _cell.angle_gamma 90 _cell.entry_id 4NK9 _cell.length_a 210.34 _cell.length_b 55.97 _cell.length_c 65.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 K N N # _chem_comp.formula 'C22 H25 N7 O3' _chem_comp.formula_weight 435.479 _chem_comp.id 2K5 _chem_comp.mon_nstd_flag . _chem_comp.name N~4~-{5-[2-(3,5-dimethoxyphenyl)ethyl]-1H-pyrazol-3-yl}-N~2~-[(3-methyl-1,2-oxazol-5-yl)methyl]pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C7 2K5 doub 1 n y C6 N2 2K5 sing 2 n y C7 C8 2K5 sing 3 n y N2 C5 2K5 doub 4 n y C8 N4 2K5 sing 5 n n C8 N3 2K5 doub 6 n y C5 N3 2K5 sing 7 n y C5 N1 2K5 sing 8 n n N4 C9 2K5 sing 9 n n N1 C4 2K5 sing 10 n n C9 N6 2K5 doub 11 n y C9 C10 2K5 sing 12 n y C4 C3 2K5 sing 13 n n N6 N5 2K5 sing 14 n y C10 C11 2K5 doub 15 n y C3 C2 2K5 doub 16 n y C3 O 2K5 sing 17 n y N5 C11 2K5 sing 18 n y C11 C12 2K5 sing 19 n n C2 C1 2K5 sing 20 n y O N 2K5 sing 21 n y C12 C13 2K5 sing 22 n n C1 N 2K5 doub 23 n y C1 C 2K5 sing 24 n n C13 C14 2K5 sing 25 n n C14 C19 2K5 doub 26 n y C14 C15 2K5 sing 27 n y C19 C18 2K5 sing 28 n y C15 C16 2K5 doub 29 n y C18 O1 2K5 sing 30 n n C18 C17 2K5 doub 31 n y O1 C20 2K5 sing 32 n n C16 C17 2K5 sing 33 n y C16 O2 2K5 sing 34 n n O2 C21 2K5 sing 35 n n C21 H1 2K5 sing 36 n n C21 H2 2K5 sing 37 n n C21 H3 2K5 sing 38 n n C15 H4 2K5 sing 39 n n C17 H5 2K5 sing 40 n n C20 H6 2K5 sing 41 n n C20 H7 2K5 sing 42 n n C20 H8 2K5 sing 43 n n C19 H9 2K5 sing 44 n n C13 H10 2K5 sing 45 n n C13 H11 2K5 sing 46 n n C12 H12 2K5 sing 47 n n C12 H13 2K5 sing 48 n n C10 H14 2K5 sing 49 n n N5 H15 2K5 sing 50 n n N4 H16 2K5 sing 51 n n C7 H17 2K5 sing 52 n n C6 H18 2K5 sing 53 n n N1 H19 2K5 sing 54 n n C4 H20 2K5 sing 55 n n C4 H21 2K5 sing 56 n n C2 H22 2K5 sing 57 n n C H23 2K5 sing 58 n n C H24 2K5 sing 59 n n C H25 2K5 sing 60 n n # _atom_sites.entry_id 4NK9 _atom_sites.fract_transf_matrix[1][1] 0.004754 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001493 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017867 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 801 2 EDO EDO . D 2 EDO A 1 802 3 EDO EDO . E 2 EDO A 1 803 4 EDO EDO . F 2 EDO A 1 804 5 EDO EDO . G 3 SO4 A 1 805 2 SO4 SO4 . H 3 SO4 A 1 806 3 SO4 SO4 . I 4 2K5 A 1 807 1 2K5 2K5 . J 3 SO4 B 1 801 1 SO4 SO4 . K 4 2K5 B 1 802 2 2K5 2K5 . L 5 HOH A 1 901 16 HOH HOH . L 5 HOH A 2 902 18 HOH HOH . L 5 HOH A 3 903 21 HOH HOH . L 5 HOH A 4 904 24 HOH HOH . L 5 HOH A 5 905 26 HOH HOH . L 5 HOH A 6 906 34 HOH HOH . L 5 HOH A 7 907 35 HOH HOH . L 5 HOH A 8 908 45 HOH HOH . L 5 HOH A 9 909 46 HOH HOH . L 5 HOH A 10 910 49 HOH HOH . L 5 HOH A 11 911 60 HOH HOH . L 5 HOH A 12 912 61 HOH HOH . L 5 HOH A 13 913 67 HOH HOH . L 5 HOH A 14 914 70 HOH HOH . L 5 HOH A 15 915 72 HOH HOH . L 5 HOH A 16 916 73 HOH HOH . L 5 HOH A 17 917 76 HOH HOH . L 5 HOH A 18 918 77 HOH HOH . L 5 HOH A 19 919 78 HOH HOH . L 5 HOH A 20 920 79 HOH HOH . L 5 HOH A 21 921 80 HOH HOH . L 5 HOH A 22 922 82 HOH HOH . L 5 HOH A 23 923 83 HOH HOH . L 5 HOH A 24 924 87 HOH HOH . L 5 HOH A 25 925 94 HOH HOH . L 5 HOH A 26 926 98 HOH HOH . L 5 HOH A 27 927 101 HOH HOH . L 5 HOH A 28 928 102 HOH HOH . L 5 HOH A 29 929 115 HOH HOH . L 5 HOH A 30 930 118 HOH HOH . L 5 HOH A 31 931 121 HOH HOH . L 5 HOH A 32 932 126 HOH HOH . L 5 HOH A 33 933 130 HOH HOH . L 5 HOH A 34 934 131 HOH HOH . L 5 HOH A 35 935 133 HOH HOH . L 5 HOH A 36 936 134 HOH HOH . L 5 HOH A 37 937 137 HOH HOH . L 5 HOH A 38 938 138 HOH HOH . L 5 HOH A 39 939 141 HOH HOH . L 5 HOH A 40 940 149 HOH HOH . L 5 HOH A 41 941 152 HOH HOH . L 5 HOH A 42 942 154 HOH HOH . L 5 HOH A 43 943 156 HOH HOH . L 5 HOH A 44 944 157 HOH HOH . L 5 HOH A 45 945 159 HOH HOH . L 5 HOH A 46 946 161 HOH HOH . L 5 HOH A 47 947 165 HOH HOH . L 5 HOH A 48 948 166 HOH HOH . M 5 HOH B 1 901 25 HOH HOH . M 5 HOH B 2 902 55 HOH HOH . M 5 HOH B 3 903 17 HOH HOH . M 5 HOH B 4 904 19 HOH HOH . M 5 HOH B 5 905 20 HOH HOH . M 5 HOH B 6 906 36 HOH HOH . M 5 HOH B 7 907 37 HOH HOH . M 5 HOH B 8 908 39 HOH HOH . M 5 HOH B 9 909 41 HOH HOH . M 5 HOH B 10 910 47 HOH HOH . M 5 HOH B 11 911 53 HOH HOH . M 5 HOH B 12 912 56 HOH HOH . M 5 HOH B 13 913 58 HOH HOH . M 5 HOH B 14 914 59 HOH HOH . M 5 HOH B 15 915 65 HOH HOH . M 5 HOH B 16 916 68 HOH HOH . M 5 HOH B 17 917 84 HOH HOH . M 5 HOH B 18 918 86 HOH HOH . M 5 HOH B 19 919 89 HOH HOH . M 5 HOH B 20 920 90 HOH HOH . M 5 HOH B 21 921 104 HOH HOH . M 5 HOH B 22 922 105 HOH HOH . M 5 HOH B 23 923 108 HOH HOH . M 5 HOH B 24 924 117 HOH HOH . M 5 HOH B 25 925 120 HOH HOH . M 5 HOH B 26 926 122 HOH HOH . M 5 HOH B 27 927 124 HOH HOH . M 5 HOH B 28 928 125 HOH HOH . M 5 HOH B 29 929 127 HOH HOH . M 5 HOH B 30 930 142 HOH HOH . M 5 HOH B 31 931 143 HOH HOH . M 5 HOH B 32 932 148 HOH HOH . M 5 HOH B 33 933 158 HOH HOH . M 5 HOH B 34 934 162 HOH HOH . M 5 HOH B 35 935 163 HOH HOH . M 5 HOH B 36 936 164 HOH HOH . M 5 HOH B 37 937 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C21 2K5 . . . K 4 27.052 6.282 14.053 1 76.18 ? C21 2K5 802 B 1 HETATM 2 O O2 2K5 . . . K 4 27.259 5.261 15.04 1 77.72 ? O2 2K5 802 B 1 HETATM 3 C C16 2K5 . . . K 4 26.765 5.433 16.321 1 77.08 ? C16 2K5 802 B 1 HETATM 4 C C15 2K5 . . . K 4 27.385 4.669 17.315 1 76.24 ? C15 2K5 802 B 1 HETATM 5 C C17 2K5 . . . K 4 25.688 6.288 16.614 1 77.66 ? C17 2K5 802 B 1 HETATM 6 C C18 2K5 . . . K 4 25.231 6.387 17.933 1 73.97 ? C18 2K5 802 B 1 HETATM 7 O O1 2K5 . . . K 4 24.138 7.197 18.272 1 67.56 ? O1 2K5 802 B 1 HETATM 8 C C20 2K5 . . . K 4 23.847 8.364 17.489 1 61.45 ? C20 2K5 802 B 1 HETATM 9 C C19 2K5 . . . K 4 25.84 5.64 18.968 1 75.23 ? C19 2K5 802 B 1 HETATM 10 C C14 2K5 . . . K 4 26.944 4.777 18.646 1 74.15 ? C14 2K5 802 B 1 HETATM 11 C C13 2K5 . . . K 4 27.657 3.948 19.687 1 68.23 ? C13 2K5 802 B 1 HETATM 12 C C12 2K5 . . . K 4 26.678 3.464 20.746 1 67.75 ? C12 2K5 802 B 1 HETATM 13 C C11 2K5 . . . K 4 27.083 2.212 21.38 1 68.16 ? C11 2K5 802 B 1 HETATM 14 C C10 2K5 . . . K 4 27.915 2.013 22.5 1 67.7 ? C10 2K5 802 B 1 HETATM 15 N N5 2K5 . . . K 4 26.622 1.039 20.928 1 67.45 ? N5 2K5 802 B 1 HETATM 16 N N6 2K5 . . . K 4 27.16 0.123 21.765 1 66.9 ? N6 2K5 802 B 1 HETATM 17 C C9 2K5 . . . K 4 27.943 0.654 22.706 1 68.06 ? C9 2K5 802 B 1 HETATM 18 N N4 2K5 . . . K 4 28.648 -0.127 23.652 1 67.54 ? N4 2K5 802 B 1 HETATM 19 C C8 2K5 . . . K 4 29.698 0.226 24.519 1 64.51 ? C8 2K5 802 B 1 HETATM 20 C C7 2K5 . . . K 4 30.401 -0.723 25.31 1 65.14 ? C7 2K5 802 B 1 HETATM 21 C C6 2K5 . . . K 4 31.411 -0.215 26.148 1 61.59 ? C6 2K5 802 B 1 HETATM 22 N N2 2K5 . . . K 4 31.734 1.116 26.21 1 56.96 ? N2 2K5 802 B 1 HETATM 23 N N3 2K5 . . . K 4 30.026 1.578 24.57 1 58.83 ? N3 2K5 802 B 1 HETATM 24 C C5 2K5 . . . K 4 31.024 1.929 25.415 1 56.56 ? C5 2K5 802 B 1 HETATM 25 N N1 2K5 . . . K 4 31.302 3.242 25.459 1 55.34 ? N1 2K5 802 B 1 HETATM 26 C C4 2K5 . . . K 4 30.456 4.269 24.84 1 53.92 ? C4 2K5 802 B 1 HETATM 27 C C3 2K5 . . . K 4 30.874 4.518 23.425 1 56.59 ? C3 2K5 802 B 1 HETATM 28 C C2 2K5 . . . K 4 31.943 4.128 22.711 1 55.98 ? C2 2K5 802 B 1 HETATM 29 O O 2K5 . . . K 4 30.063 5.32 22.662 1 57.45 ? O 2K5 802 B 1 HETATM 30 N N 2K5 . . . K 4 30.674 5.407 21.39 1 58.49 ? N 2K5 802 B 1 HETATM 31 C C1 2K5 . . . K 4 31.765 4.706 21.445 1 57.5 ? C1 2K5 802 B 1 HETATM 32 C C 2K5 . . . K 4 32.656 4.602 20.235 1 53.77 ? C 2K5 802 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 383 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #