data_4NK9 # _model_server_result.job_id BaFd5MYyj4KARhy_RsCE2Q _model_server_result.datetime_utc '2024-10-11 01:19:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nk9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 4NK9 # _exptl.entry_id 4NK9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.43 _cell.angle_gamma 90 _cell.entry_id 4NK9 _cell.length_a 210.34 _cell.length_b 55.97 _cell.length_c 65.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 143 n n C1 C2 EDO sing 144 n n C1 H11 EDO sing 145 n n C1 H12 EDO sing 146 n n O1 HO1 EDO sing 147 n n C2 O2 EDO sing 148 n n C2 H21 EDO sing 149 n n C2 H22 EDO sing 150 n n O2 HO2 EDO sing 151 n n # _atom_sites.entry_id 4NK9 _atom_sites.fract_transf_matrix[1][1] 0.004754 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001493 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017867 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 801 2 EDO EDO . D 2 EDO A 1 802 3 EDO EDO . E 2 EDO A 1 803 4 EDO EDO . F 2 EDO A 1 804 5 EDO EDO . G 3 SO4 A 1 805 2 SO4 SO4 . H 3 SO4 A 1 806 3 SO4 SO4 . I 4 2K5 A 1 807 1 2K5 2K5 . J 3 SO4 B 1 801 1 SO4 SO4 . K 4 2K5 B 1 802 2 2K5 2K5 . L 5 HOH A 1 901 16 HOH HOH . L 5 HOH A 2 902 18 HOH HOH . L 5 HOH A 3 903 21 HOH HOH . L 5 HOH A 4 904 24 HOH HOH . L 5 HOH A 5 905 26 HOH HOH . L 5 HOH A 6 906 34 HOH HOH . L 5 HOH A 7 907 35 HOH HOH . L 5 HOH A 8 908 45 HOH HOH . L 5 HOH A 9 909 46 HOH HOH . L 5 HOH A 10 910 49 HOH HOH . L 5 HOH A 11 911 60 HOH HOH . L 5 HOH A 12 912 61 HOH HOH . L 5 HOH A 13 913 67 HOH HOH . L 5 HOH A 14 914 70 HOH HOH . L 5 HOH A 15 915 72 HOH HOH . L 5 HOH A 16 916 73 HOH HOH . L 5 HOH A 17 917 76 HOH HOH . L 5 HOH A 18 918 77 HOH HOH . L 5 HOH A 19 919 78 HOH HOH . L 5 HOH A 20 920 79 HOH HOH . L 5 HOH A 21 921 80 HOH HOH . L 5 HOH A 22 922 82 HOH HOH . L 5 HOH A 23 923 83 HOH HOH . L 5 HOH A 24 924 87 HOH HOH . L 5 HOH A 25 925 94 HOH HOH . L 5 HOH A 26 926 98 HOH HOH . L 5 HOH A 27 927 101 HOH HOH . L 5 HOH A 28 928 102 HOH HOH . L 5 HOH A 29 929 115 HOH HOH . L 5 HOH A 30 930 118 HOH HOH . L 5 HOH A 31 931 121 HOH HOH . L 5 HOH A 32 932 126 HOH HOH . L 5 HOH A 33 933 130 HOH HOH . L 5 HOH A 34 934 131 HOH HOH . L 5 HOH A 35 935 133 HOH HOH . L 5 HOH A 36 936 134 HOH HOH . L 5 HOH A 37 937 137 HOH HOH . L 5 HOH A 38 938 138 HOH HOH . L 5 HOH A 39 939 141 HOH HOH . L 5 HOH A 40 940 149 HOH HOH . L 5 HOH A 41 941 152 HOH HOH . L 5 HOH A 42 942 154 HOH HOH . L 5 HOH A 43 943 156 HOH HOH . L 5 HOH A 44 944 157 HOH HOH . L 5 HOH A 45 945 159 HOH HOH . L 5 HOH A 46 946 161 HOH HOH . L 5 HOH A 47 947 165 HOH HOH . L 5 HOH A 48 948 166 HOH HOH . M 5 HOH B 1 901 25 HOH HOH . M 5 HOH B 2 902 55 HOH HOH . M 5 HOH B 3 903 17 HOH HOH . M 5 HOH B 4 904 19 HOH HOH . M 5 HOH B 5 905 20 HOH HOH . M 5 HOH B 6 906 36 HOH HOH . M 5 HOH B 7 907 37 HOH HOH . M 5 HOH B 8 908 39 HOH HOH . M 5 HOH B 9 909 41 HOH HOH . M 5 HOH B 10 910 47 HOH HOH . M 5 HOH B 11 911 53 HOH HOH . M 5 HOH B 12 912 56 HOH HOH . M 5 HOH B 13 913 58 HOH HOH . M 5 HOH B 14 914 59 HOH HOH . M 5 HOH B 15 915 65 HOH HOH . M 5 HOH B 16 916 68 HOH HOH . M 5 HOH B 17 917 84 HOH HOH . M 5 HOH B 18 918 86 HOH HOH . M 5 HOH B 19 919 89 HOH HOH . M 5 HOH B 20 920 90 HOH HOH . M 5 HOH B 21 921 104 HOH HOH . M 5 HOH B 22 922 105 HOH HOH . M 5 HOH B 23 923 108 HOH HOH . M 5 HOH B 24 924 117 HOH HOH . M 5 HOH B 25 925 120 HOH HOH . M 5 HOH B 26 926 122 HOH HOH . M 5 HOH B 27 927 124 HOH HOH . M 5 HOH B 28 928 125 HOH HOH . M 5 HOH B 29 929 127 HOH HOH . M 5 HOH B 30 930 142 HOH HOH . M 5 HOH B 31 931 143 HOH HOH . M 5 HOH B 32 932 148 HOH HOH . M 5 HOH B 33 933 158 HOH HOH . M 5 HOH B 34 934 162 HOH HOH . M 5 HOH B 35 935 163 HOH HOH . M 5 HOH B 36 936 164 HOH HOH . M 5 HOH B 37 937 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 86.067 -6.324 37.288 1 70.36 ? C1 EDO 803 A 1 HETATM 2 O O1 EDO . . . E 2 85.391 -5.515 36.356 1 69.81 ? O1 EDO 803 A 1 HETATM 3 C C2 EDO . . . E 2 86.579 -5.409 38.43 1 71.55 ? C2 EDO 803 A 1 HETATM 4 O O2 EDO . . . E 2 87.282 -4.267 37.92 1 70.01 ? O2 EDO 803 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #