data_4NL9 # _model_server_result.job_id kMJlzsz9XaHpkfWWxRhfqg _model_server_result.datetime_utc '2025-05-24 13:32:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nl9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 4NL9 # _exptl.entry_id 4NL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NL9 _cell.length_a 47.7 _cell.length_b 108.52 _cell.length_c 101.74 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F,H 1 1 B,D,E,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D OG SER 17 D SER 17 1_555 E MG MG . D MG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc2 E MG MG . D MG 101 1_555 I O HOH . D HOH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 E MG MG . D MG 101 1_555 I O HOH . D HOH 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4NL9 _atom_sites.fract_transf_matrix[1][1] 0.020964 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009829 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG D 1 101 1 MG MG . F 4 HOH A 1 101 3 HOH HOH . F 4 HOH A 2 102 4 HOH HOH . F 4 HOH A 3 103 5 HOH HOH . F 4 HOH A 4 104 6 HOH HOH . F 4 HOH A 5 105 8 HOH HOH . F 4 HOH A 6 106 10 HOH HOH . F 4 HOH A 7 107 12 HOH HOH . F 4 HOH A 8 108 24 HOH HOH . F 4 HOH A 9 109 28 HOH HOH . F 4 HOH A 10 110 29 HOH HOH . F 4 HOH A 11 111 37 HOH HOH . F 4 HOH A 12 112 39 HOH HOH . F 4 HOH A 13 113 42 HOH HOH . F 4 HOH A 14 114 47 HOH HOH . F 4 HOH A 15 115 53 HOH HOH . F 4 HOH A 16 116 54 HOH HOH . F 4 HOH A 17 117 55 HOH HOH . F 4 HOH A 18 118 56 HOH HOH . F 4 HOH A 19 119 61 HOH HOH . F 4 HOH A 20 120 66 HOH HOH . F 4 HOH A 21 121 73 HOH HOH . F 4 HOH A 22 122 74 HOH HOH . F 4 HOH A 23 123 79 HOH HOH . F 4 HOH A 24 124 80 HOH HOH . F 4 HOH A 25 125 85 HOH HOH . F 4 HOH A 26 126 88 HOH HOH . F 4 HOH A 27 127 92 HOH HOH . F 4 HOH A 28 128 102 HOH HOH . F 4 HOH A 29 129 111 HOH HOH . F 4 HOH A 30 130 112 HOH HOH . F 4 HOH A 31 131 117 HOH HOH . F 4 HOH A 32 132 123 HOH HOH . F 4 HOH A 33 133 126 HOH HOH . F 4 HOH A 34 134 127 HOH HOH . F 4 HOH A 35 135 131 HOH HOH . F 4 HOH A 36 136 132 HOH HOH . F 4 HOH A 37 137 135 HOH HOH . F 4 HOH A 38 138 138 HOH HOH . F 4 HOH A 39 139 141 HOH HOH . F 4 HOH A 40 140 145 HOH HOH . F 4 HOH A 41 141 153 HOH HOH . F 4 HOH A 42 142 166 HOH HOH . F 4 HOH A 43 143 176 HOH HOH . F 4 HOH A 44 144 177 HOH HOH . F 4 HOH A 45 145 179 HOH HOH . F 4 HOH A 46 146 182 HOH HOH . F 4 HOH A 47 147 183 HOH HOH . F 4 HOH A 48 148 187 HOH HOH . F 4 HOH A 49 149 191 HOH HOH . F 4 HOH A 50 150 192 HOH HOH . F 4 HOH A 51 151 198 HOH HOH . F 4 HOH A 52 152 203 HOH HOH . F 4 HOH A 53 153 205 HOH HOH . F 4 HOH A 54 154 210 HOH HOH . F 4 HOH A 55 155 226 HOH HOH . F 4 HOH A 56 156 228 HOH HOH . F 4 HOH A 57 157 235 HOH HOH . F 4 HOH A 58 158 237 HOH HOH . F 4 HOH A 59 159 238 HOH HOH . F 4 HOH A 60 160 239 HOH HOH . F 4 HOH A 61 161 242 HOH HOH . F 4 HOH A 62 162 244 HOH HOH . G 4 HOH B 1 101 1 HOH HOH . G 4 HOH B 2 102 2 HOH HOH . G 4 HOH B 3 103 9 HOH HOH . G 4 HOH B 4 104 14 HOH HOH . G 4 HOH B 5 105 17 HOH HOH . G 4 HOH B 6 106 19 HOH HOH . G 4 HOH B 7 107 20 HOH HOH . G 4 HOH B 8 108 21 HOH HOH . G 4 HOH B 9 109 23 HOH HOH . G 4 HOH B 10 110 30 HOH HOH . G 4 HOH B 11 111 34 HOH HOH . G 4 HOH B 12 112 43 HOH HOH . G 4 HOH B 13 113 44 HOH HOH . G 4 HOH B 14 114 45 HOH HOH . G 4 HOH B 15 115 49 HOH HOH . G 4 HOH B 16 116 50 HOH HOH . G 4 HOH B 17 117 58 HOH HOH . G 4 HOH B 18 118 59 HOH HOH . G 4 HOH B 19 119 63 HOH HOH . G 4 HOH B 20 120 67 HOH HOH . G 4 HOH B 21 121 68 HOH HOH . G 4 HOH B 22 122 69 HOH HOH . G 4 HOH B 23 123 76 HOH HOH . G 4 HOH B 24 124 84 HOH HOH . G 4 HOH B 25 125 86 HOH HOH . G 4 HOH B 26 126 94 HOH HOH . G 4 HOH B 27 127 96 HOH HOH . G 4 HOH B 28 128 104 HOH HOH . G 4 HOH B 29 129 105 HOH HOH . G 4 HOH B 30 130 110 HOH HOH . G 4 HOH B 31 131 115 HOH HOH . G 4 HOH B 32 132 118 HOH HOH . G 4 HOH B 33 133 119 HOH HOH . G 4 HOH B 34 134 125 HOH HOH . G 4 HOH B 35 135 128 HOH HOH . G 4 HOH B 36 136 136 HOH HOH . G 4 HOH B 37 137 139 HOH HOH . G 4 HOH B 38 138 140 HOH HOH . G 4 HOH B 39 139 147 HOH HOH . G 4 HOH B 40 140 150 HOH HOH . G 4 HOH B 41 141 154 HOH HOH . G 4 HOH B 42 142 156 HOH HOH . G 4 HOH B 43 143 161 HOH HOH . G 4 HOH B 44 144 164 HOH HOH . G 4 HOH B 45 145 167 HOH HOH . G 4 HOH B 46 146 168 HOH HOH . G 4 HOH B 47 147 170 HOH HOH . G 4 HOH B 48 148 172 HOH HOH . G 4 HOH B 49 149 178 HOH HOH . G 4 HOH B 50 150 185 HOH HOH . G 4 HOH B 51 151 193 HOH HOH . G 4 HOH B 52 152 196 HOH HOH . G 4 HOH B 53 153 197 HOH HOH . G 4 HOH B 54 154 201 HOH HOH . G 4 HOH B 55 155 202 HOH HOH . G 4 HOH B 56 156 204 HOH HOH . G 4 HOH B 57 157 209 HOH HOH . G 4 HOH B 58 158 213 HOH HOH . G 4 HOH B 59 159 215 HOH HOH . G 4 HOH B 60 160 219 HOH HOH . G 4 HOH B 61 161 221 HOH HOH . G 4 HOH B 62 162 222 HOH HOH . G 4 HOH B 63 163 230 HOH HOH . G 4 HOH B 64 164 241 HOH HOH . H 4 HOH C 1 101 13 HOH HOH . H 4 HOH C 2 102 16 HOH HOH . H 4 HOH C 3 103 25 HOH HOH . H 4 HOH C 4 104 27 HOH HOH . H 4 HOH C 5 105 31 HOH HOH . H 4 HOH C 6 106 33 HOH HOH . H 4 HOH C 7 107 40 HOH HOH . H 4 HOH C 8 108 51 HOH HOH . H 4 HOH C 9 109 70 HOH HOH . H 4 HOH C 10 110 72 HOH HOH . H 4 HOH C 11 111 75 HOH HOH . H 4 HOH C 12 112 83 HOH HOH . H 4 HOH C 13 113 90 HOH HOH . H 4 HOH C 14 114 93 HOH HOH . H 4 HOH C 15 115 95 HOH HOH . H 4 HOH C 16 116 97 HOH HOH . H 4 HOH C 17 117 99 HOH HOH . H 4 HOH C 18 118 100 HOH HOH . H 4 HOH C 19 119 101 HOH HOH . H 4 HOH C 20 120 109 HOH HOH . H 4 HOH C 21 121 116 HOH HOH . H 4 HOH C 22 122 121 HOH HOH . H 4 HOH C 23 123 142 HOH HOH . H 4 HOH C 24 124 146 HOH HOH . H 4 HOH C 25 125 148 HOH HOH . H 4 HOH C 26 126 149 HOH HOH . H 4 HOH C 27 127 151 HOH HOH . H 4 HOH C 28 128 152 HOH HOH . H 4 HOH C 29 129 159 HOH HOH . H 4 HOH C 30 130 160 HOH HOH . H 4 HOH C 31 131 162 HOH HOH . H 4 HOH C 32 132 163 HOH HOH . H 4 HOH C 33 133 171 HOH HOH . H 4 HOH C 34 134 173 HOH HOH . H 4 HOH C 35 135 175 HOH HOH . H 4 HOH C 36 136 180 HOH HOH . H 4 HOH C 37 137 184 HOH HOH . H 4 HOH C 38 138 186 HOH HOH . H 4 HOH C 39 139 188 HOH HOH . H 4 HOH C 40 140 199 HOH HOH . H 4 HOH C 41 141 200 HOH HOH . H 4 HOH C 42 142 207 HOH HOH . H 4 HOH C 43 143 208 HOH HOH . H 4 HOH C 44 144 212 HOH HOH . H 4 HOH C 45 145 220 HOH HOH . H 4 HOH C 46 146 224 HOH HOH . H 4 HOH C 47 147 227 HOH HOH . H 4 HOH C 48 148 231 HOH HOH . H 4 HOH C 49 149 233 HOH HOH . H 4 HOH C 50 150 234 HOH HOH . H 4 HOH C 51 151 236 HOH HOH . H 4 HOH C 52 152 243 HOH HOH . H 4 HOH C 53 153 246 HOH HOH . I 4 HOH D 1 201 7 HOH HOH . I 4 HOH D 2 202 11 HOH HOH . I 4 HOH D 3 203 15 HOH HOH . I 4 HOH D 4 204 18 HOH HOH . I 4 HOH D 5 205 22 HOH HOH . I 4 HOH D 6 206 26 HOH HOH . I 4 HOH D 7 207 32 HOH HOH . I 4 HOH D 8 208 35 HOH HOH . I 4 HOH D 9 209 36 HOH HOH . I 4 HOH D 10 210 38 HOH HOH . I 4 HOH D 11 211 41 HOH HOH . I 4 HOH D 12 212 46 HOH HOH . I 4 HOH D 13 213 48 HOH HOH . I 4 HOH D 14 214 52 HOH HOH . I 4 HOH D 15 215 57 HOH HOH . I 4 HOH D 16 216 60 HOH HOH . I 4 HOH D 17 217 62 HOH HOH . I 4 HOH D 18 218 64 HOH HOH . I 4 HOH D 19 219 65 HOH HOH . I 4 HOH D 20 220 71 HOH HOH . I 4 HOH D 21 221 77 HOH HOH . I 4 HOH D 22 222 78 HOH HOH . I 4 HOH D 23 223 81 HOH HOH . I 4 HOH D 24 224 82 HOH HOH . I 4 HOH D 25 225 87 HOH HOH . I 4 HOH D 26 226 89 HOH HOH . I 4 HOH D 27 227 91 HOH HOH . I 4 HOH D 28 228 98 HOH HOH . I 4 HOH D 29 229 103 HOH HOH . I 4 HOH D 30 230 106 HOH HOH . I 4 HOH D 31 231 107 HOH HOH . I 4 HOH D 32 232 108 HOH HOH . I 4 HOH D 33 233 113 HOH HOH . I 4 HOH D 34 234 114 HOH HOH . I 4 HOH D 35 235 120 HOH HOH . I 4 HOH D 36 236 122 HOH HOH . I 4 HOH D 37 237 124 HOH HOH . I 4 HOH D 38 238 129 HOH HOH . I 4 HOH D 39 239 130 HOH HOH . I 4 HOH D 40 240 133 HOH HOH . I 4 HOH D 41 241 134 HOH HOH . I 4 HOH D 42 242 137 HOH HOH . I 4 HOH D 43 243 143 HOH HOH . I 4 HOH D 44 244 144 HOH HOH . I 4 HOH D 45 245 155 HOH HOH . I 4 HOH D 46 246 157 HOH HOH . I 4 HOH D 47 247 158 HOH HOH . I 4 HOH D 48 248 165 HOH HOH . I 4 HOH D 49 249 169 HOH HOH . I 4 HOH D 50 250 174 HOH HOH . I 4 HOH D 51 251 181 HOH HOH . I 4 HOH D 52 252 189 HOH HOH . I 4 HOH D 53 253 190 HOH HOH . I 4 HOH D 54 254 194 HOH HOH . I 4 HOH D 55 255 195 HOH HOH . I 4 HOH D 56 256 206 HOH HOH . I 4 HOH D 57 257 211 HOH HOH . I 4 HOH D 58 258 214 HOH HOH . I 4 HOH D 59 259 216 HOH HOH . I 4 HOH D 60 260 217 HOH HOH . I 4 HOH D 61 261 218 HOH HOH . I 4 HOH D 62 262 223 HOH HOH . I 4 HOH D 63 263 225 HOH HOH . I 4 HOH D 64 264 229 HOH HOH . I 4 HOH D 65 265 232 HOH HOH . I 4 HOH D 66 266 240 HOH HOH . I 4 HOH D 67 267 245 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -30.159 _atom_site.Cartn_y -34.756 _atom_site.Cartn_z 16.572 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #