data_4NLU # _model_server_result.job_id g3Izqvkk6SwkTuzi6psZ3w _model_server_result.datetime_utc '2024-12-06 13:04:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nlu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":909}' # _entry.id 4NLU # _exptl.entry_id 4NLU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4NLU _cell.length_a 129.093 _cell.length_b 129.093 _cell.length_c 112.466 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NLU _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 95 A MET 95 1_555 A N CAS 96 A CAS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C CAS 96 A CAS 96 1_555 A N LEU 97 A LEU 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C GLY 211 A GLY 211 1_555 A N CAS 212 A CAS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 A C CAS 212 A CAS 212 1_555 A N ASP 213 A ASP 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C TYR 280 A TYR 280 1_555 A N CAS 281 A CAS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 A C CAS 281 A CAS 281 1_555 A N VAL 282 A VAL 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C ALA 289 A ALA 289 1_555 A N CAS 290 A CAS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 A C CAS 290 A CAS 290 1_555 A N SER 291 A SER 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A O LEU 268 A LEU 268 1_555 J NA NA . A NA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc2 A O ASN 269 A ASN 269 1_555 J NA NA . A NA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc3 A OG SER 271 A SER 271 1_555 J NA NA . A NA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? metalc ? metalc4 A O GLY 284 A GLY 284 1_555 J NA NA . A NA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc5 A O GLY 285 A GLY 285 1_555 J NA NA . A NA 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc6 J NA NA . A NA 909 1_555 K O HOH . A HOH 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4NLU _atom_sites.fract_transf_matrix[1][1] 0.007746 _atom_sites.fract_transf_matrix[1][2] 0.004472 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008945 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACY A 1 901 901 ACY ACY . C 2 ACY A 1 902 902 ACY ACY . D 2 ACY A 1 903 903 ACY ACY . E 2 ACY A 1 904 904 ACY ACY . F 2 ACY A 1 905 905 ACY ACY . G 2 ACY A 1 906 907 ACY ACY . H 3 1PE A 1 907 1001 1PE 1PE . I 3 1PE A 1 908 1002 1PE 1PE . J 4 NA A 1 909 2001 NA NA . K 5 HOH A 1 1001 501 HOH HOH . K 5 HOH A 2 1002 502 HOH HOH . K 5 HOH A 3 1003 503 HOH HOH . K 5 HOH A 4 1004 504 HOH HOH . K 5 HOH A 5 1005 505 HOH HOH . K 5 HOH A 6 1006 506 HOH HOH . K 5 HOH A 7 1007 507 HOH HOH . K 5 HOH A 8 1008 508 HOH HOH . K 5 HOH A 9 1009 509 HOH HOH . K 5 HOH A 10 1010 510 HOH HOH . K 5 HOH A 11 1011 511 HOH HOH . K 5 HOH A 12 1012 512 HOH HOH . K 5 HOH A 13 1013 513 HOH HOH . K 5 HOH A 14 1014 514 HOH HOH . K 5 HOH A 15 1015 515 HOH HOH . K 5 HOH A 16 1016 516 HOH HOH . K 5 HOH A 17 1017 517 HOH HOH . K 5 HOH A 18 1018 518 HOH HOH . K 5 HOH A 19 1019 519 HOH HOH . K 5 HOH A 20 1020 520 HOH HOH . K 5 HOH A 21 1021 521 HOH HOH . K 5 HOH A 22 1022 522 HOH HOH . K 5 HOH A 23 1023 523 HOH HOH . K 5 HOH A 24 1024 524 HOH HOH . K 5 HOH A 25 1025 525 HOH HOH . K 5 HOH A 26 1026 526 HOH HOH . K 5 HOH A 27 1027 527 HOH HOH . K 5 HOH A 28 1028 528 HOH HOH . K 5 HOH A 29 1029 529 HOH HOH . K 5 HOH A 30 1030 530 HOH HOH . K 5 HOH A 31 1031 531 HOH HOH . K 5 HOH A 32 1032 532 HOH HOH . K 5 HOH A 33 1033 533 HOH HOH . K 5 HOH A 34 1034 534 HOH HOH . K 5 HOH A 35 1035 535 HOH HOH . K 5 HOH A 36 1036 536 HOH HOH . K 5 HOH A 37 1037 537 HOH HOH . K 5 HOH A 38 1038 538 HOH HOH . K 5 HOH A 39 1039 539 HOH HOH . K 5 HOH A 40 1040 540 HOH HOH . K 5 HOH A 41 1041 541 HOH HOH . K 5 HOH A 42 1042 542 HOH HOH . K 5 HOH A 43 1043 543 HOH HOH . K 5 HOH A 44 1044 544 HOH HOH . K 5 HOH A 45 1045 545 HOH HOH . K 5 HOH A 46 1046 546 HOH HOH . K 5 HOH A 47 1047 547 HOH HOH . K 5 HOH A 48 1048 548 HOH HOH . K 5 HOH A 49 1049 549 HOH HOH . K 5 HOH A 50 1050 550 HOH HOH . K 5 HOH A 51 1051 551 HOH HOH . K 5 HOH A 52 1052 552 HOH HOH . K 5 HOH A 53 1053 553 HOH HOH . K 5 HOH A 54 1054 554 HOH HOH . K 5 HOH A 55 1055 555 HOH HOH . K 5 HOH A 56 1056 556 HOH HOH . K 5 HOH A 57 1057 557 HOH HOH . K 5 HOH A 58 1058 558 HOH HOH . K 5 HOH A 59 1059 559 HOH HOH . K 5 HOH A 60 1060 560 HOH HOH . K 5 HOH A 61 1061 561 HOH HOH . K 5 HOH A 62 1062 562 HOH HOH . K 5 HOH A 63 1063 563 HOH HOH . K 5 HOH A 64 1064 564 HOH HOH . K 5 HOH A 65 1065 565 HOH HOH . K 5 HOH A 66 1066 566 HOH HOH . K 5 HOH A 67 1067 567 HOH HOH . K 5 HOH A 68 1068 568 HOH HOH . K 5 HOH A 69 1069 569 HOH HOH . K 5 HOH A 70 1070 570 HOH HOH . K 5 HOH A 71 1071 571 HOH HOH . K 5 HOH A 72 1072 572 HOH HOH . K 5 HOH A 73 1073 573 HOH HOH . K 5 HOH A 74 1074 574 HOH HOH . K 5 HOH A 75 1075 575 HOH HOH . K 5 HOH A 76 1076 576 HOH HOH . K 5 HOH A 77 1077 577 HOH HOH . K 5 HOH A 78 1078 578 HOH HOH . K 5 HOH A 79 1079 579 HOH HOH . K 5 HOH A 80 1080 580 HOH HOH . K 5 HOH A 81 1081 581 HOH HOH . K 5 HOH A 82 1082 582 HOH HOH . K 5 HOH A 83 1083 583 HOH HOH . K 5 HOH A 84 1084 584 HOH HOH . K 5 HOH A 85 1085 585 HOH HOH . K 5 HOH A 86 1086 586 HOH HOH . K 5 HOH A 87 1087 587 HOH HOH . K 5 HOH A 88 1088 588 HOH HOH . K 5 HOH A 89 1089 589 HOH HOH . K 5 HOH A 90 1090 590 HOH HOH . K 5 HOH A 91 1091 591 HOH HOH . K 5 HOH A 92 1092 592 HOH HOH . K 5 HOH A 93 1093 593 HOH HOH . K 5 HOH A 94 1094 594 HOH HOH . K 5 HOH A 95 1095 595 HOH HOH . K 5 HOH A 96 1096 596 HOH HOH . K 5 HOH A 97 1097 597 HOH HOH . K 5 HOH A 98 1098 598 HOH HOH . K 5 HOH A 99 1099 599 HOH HOH . K 5 HOH A 100 1100 600 HOH HOH . K 5 HOH A 101 1101 601 HOH HOH . K 5 HOH A 102 1102 602 HOH HOH . K 5 HOH A 103 1103 603 HOH HOH . K 5 HOH A 104 1104 604 HOH HOH . K 5 HOH A 105 1105 605 HOH HOH . K 5 HOH A 106 1106 606 HOH HOH . K 5 HOH A 107 1107 607 HOH HOH . K 5 HOH A 108 1108 608 HOH HOH . K 5 HOH A 109 1109 609 HOH HOH . K 5 HOH A 110 1110 610 HOH HOH . K 5 HOH A 111 1111 611 HOH HOH . K 5 HOH A 112 1112 612 HOH HOH . K 5 HOH A 113 1113 613 HOH HOH . K 5 HOH A 114 1114 614 HOH HOH . K 5 HOH A 115 1115 615 HOH HOH . K 5 HOH A 116 1116 616 HOH HOH . K 5 HOH A 117 1117 617 HOH HOH . K 5 HOH A 118 1118 618 HOH HOH . K 5 HOH A 119 1119 619 HOH HOH . K 5 HOH A 120 1120 620 HOH HOH . K 5 HOH A 121 1121 621 HOH HOH . K 5 HOH A 122 1122 622 HOH HOH . K 5 HOH A 123 1123 623 HOH HOH . K 5 HOH A 124 1124 624 HOH HOH . K 5 HOH A 125 1125 625 HOH HOH . K 5 HOH A 126 1126 627 HOH HOH . K 5 HOH A 127 1127 628 HOH HOH . K 5 HOH A 128 1128 629 HOH HOH . K 5 HOH A 129 1129 630 HOH HOH . K 5 HOH A 130 1130 631 HOH HOH . K 5 HOH A 131 1131 632 HOH HOH . K 5 HOH A 132 1132 633 HOH HOH . K 5 HOH A 133 1133 634 HOH HOH . K 5 HOH A 134 1134 635 HOH HOH . K 5 HOH A 135 1135 636 HOH HOH . K 5 HOH A 136 1136 637 HOH HOH . K 5 HOH A 137 1137 638 HOH HOH . K 5 HOH A 138 1138 639 HOH HOH . K 5 HOH A 139 1139 640 HOH HOH . K 5 HOH A 140 1140 641 HOH HOH . K 5 HOH A 141 1141 642 HOH HOH . K 5 HOH A 142 1142 643 HOH HOH . K 5 HOH A 143 1143 644 HOH HOH . K 5 HOH A 144 1144 645 HOH HOH . K 5 HOH A 145 1145 646 HOH HOH . K 5 HOH A 146 1146 647 HOH HOH . K 5 HOH A 147 1147 648 HOH HOH . K 5 HOH A 148 1148 649 HOH HOH . K 5 HOH A 149 1149 650 HOH HOH . K 5 HOH A 150 1150 651 HOH HOH . K 5 HOH A 151 1151 652 HOH HOH . K 5 HOH A 152 1152 653 HOH HOH . K 5 HOH A 153 1153 654 HOH HOH . K 5 HOH A 154 1154 655 HOH HOH . K 5 HOH A 155 1155 656 HOH HOH . K 5 HOH A 156 1156 657 HOH HOH . K 5 HOH A 157 1157 658 HOH HOH . K 5 HOH A 158 1158 659 HOH HOH . K 5 HOH A 159 1159 660 HOH HOH . K 5 HOH A 160 1160 661 HOH HOH . K 5 HOH A 161 1161 662 HOH HOH . K 5 HOH A 162 1162 663 HOH HOH . K 5 HOH A 163 1163 664 HOH HOH . K 5 HOH A 164 1164 665 HOH HOH . K 5 HOH A 165 1165 666 HOH HOH . K 5 HOH A 166 1166 667 HOH HOH . K 5 HOH A 167 1167 668 HOH HOH . K 5 HOH A 168 1168 669 HOH HOH . K 5 HOH A 169 1169 670 HOH HOH . K 5 HOH A 170 1170 671 HOH HOH . K 5 HOH A 171 1171 672 HOH HOH . K 5 HOH A 172 1172 673 HOH HOH . K 5 HOH A 173 1173 674 HOH HOH . K 5 HOH A 174 1174 675 HOH HOH . K 5 HOH A 175 1175 676 HOH HOH . K 5 HOH A 176 1176 677 HOH HOH . K 5 HOH A 177 1177 678 HOH HOH . K 5 HOH A 178 1178 679 HOH HOH . K 5 HOH A 179 1179 680 HOH HOH . K 5 HOH A 180 1180 681 HOH HOH . K 5 HOH A 181 1181 682 HOH HOH . K 5 HOH A 182 1182 683 HOH HOH . K 5 HOH A 183 1183 684 HOH HOH . K 5 HOH A 184 1184 685 HOH HOH . K 5 HOH A 185 1185 686 HOH HOH . K 5 HOH A 186 1186 687 HOH HOH . K 5 HOH A 187 1187 688 HOH HOH . K 5 HOH A 188 1188 689 HOH HOH . K 5 HOH A 189 1189 690 HOH HOH . K 5 HOH A 190 1190 691 HOH HOH . K 5 HOH A 191 1191 692 HOH HOH . K 5 HOH A 192 1192 693 HOH HOH . K 5 HOH A 193 1193 694 HOH HOH . K 5 HOH A 194 1194 695 HOH HOH . K 5 HOH A 195 1195 696 HOH HOH . K 5 HOH A 196 1196 697 HOH HOH . K 5 HOH A 197 1197 698 HOH HOH . K 5 HOH A 198 1198 699 HOH HOH . K 5 HOH A 199 1199 700 HOH HOH . K 5 HOH A 200 1200 701 HOH HOH . K 5 HOH A 201 1201 702 HOH HOH . K 5 HOH A 202 1202 703 HOH HOH . K 5 HOH A 203 1203 704 HOH HOH . K 5 HOH A 204 1204 705 HOH HOH . K 5 HOH A 205 1205 706 HOH HOH . K 5 HOH A 206 1206 707 HOH HOH . K 5 HOH A 207 1207 708 HOH HOH . K 5 HOH A 208 1208 709 HOH HOH . K 5 HOH A 209 1209 710 HOH HOH . K 5 HOH A 210 1210 711 HOH HOH . K 5 HOH A 211 1211 712 HOH HOH . K 5 HOH A 212 1212 713 HOH HOH . K 5 HOH A 213 1213 714 HOH HOH . K 5 HOH A 214 1214 715 HOH HOH . K 5 HOH A 215 1215 716 HOH HOH . K 5 HOH A 216 1216 717 HOH HOH . K 5 HOH A 217 1217 718 HOH HOH . K 5 HOH A 218 1218 719 HOH HOH . K 5 HOH A 219 1219 720 HOH HOH . K 5 HOH A 220 1220 721 HOH HOH . K 5 HOH A 221 1221 722 HOH HOH . K 5 HOH A 222 1222 723 HOH HOH . K 5 HOH A 223 1223 724 HOH HOH . K 5 HOH A 224 1224 725 HOH HOH . K 5 HOH A 225 1225 726 HOH HOH . K 5 HOH A 226 1226 727 HOH HOH . K 5 HOH A 227 1227 728 HOH HOH . K 5 HOH A 228 1228 729 HOH HOH . K 5 HOH A 229 1229 730 HOH HOH . K 5 HOH A 230 1230 731 HOH HOH . K 5 HOH A 231 1231 732 HOH HOH . K 5 HOH A 232 1232 733 HOH HOH . K 5 HOH A 233 1233 734 HOH HOH . K 5 HOH A 234 1234 735 HOH HOH . K 5 HOH A 235 1235 736 HOH HOH . K 5 HOH A 236 1236 737 HOH HOH . K 5 HOH A 237 1237 738 HOH HOH . K 5 HOH A 238 1238 739 HOH HOH . K 5 HOH A 239 1239 740 HOH HOH . K 5 HOH A 240 1240 741 HOH HOH . K 5 HOH A 241 1241 742 HOH HOH . K 5 HOH A 242 1242 743 HOH HOH . K 5 HOH A 243 1243 744 HOH HOH . K 5 HOH A 244 1244 745 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x 98.195 _atom_site.Cartn_y 278.138 _atom_site.Cartn_z -20.515 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 909 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #