data_4NLX # _model_server_result.job_id KLdG8xGmbPKi9LEjBiCOew _model_server_result.datetime_utc '2024-12-25 18:11:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nlx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":906}' # _entry.id 4NLX # _exptl.entry_id 4NLX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4NLX _cell.length_a 129.177 _cell.length_b 129.177 _cell.length_c 111.613 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 95 A MET 95 1_555 A N CAS 96 A CAS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C CAS 96 A CAS 96 1_555 A N LEU 97 A LEU 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C GLY 211 A GLY 211 1_555 A N CAS 212 A CAS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 A C CAS 212 A CAS 212 1_555 A N ASP 213 A ASP 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C TYR 280 A TYR 280 1_555 A N CAS 281 A CAS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale6 A C CAS 281 A CAS 281 1_555 A N VAL 282 A VAL 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A O LEU 268 A LEU 268 1_555 I NA NA . A NA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc2 A O ASN 269 A ASN 269 1_555 I NA NA . A NA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc3 A OG SER 271 A SER 271 1_555 I NA NA . A NA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc4 A O GLY 284 A GLY 284 1_555 I NA NA . A NA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc5 A O GLY 285 A GLY 285 1_555 I NA NA . A NA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc6 I NA NA . A NA 908 1_555 J O HOH . A HOH 1078 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 4NLX _atom_sites.fract_transf_matrix[1][1] 0.007741 _atom_sites.fract_transf_matrix[1][2] 0.004469 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACY A 1 901 901 ACY ACY . C 2 ACY A 1 902 902 ACY ACY . D 2 ACY A 1 903 904 ACY ACY . E 2 ACY A 1 904 905 ACY ACY . F 2 ACY A 1 905 906 ACY ACY . G 3 1PE A 1 906 1001 1PE 1PE . H 3 1PE A 1 907 1002 1PE 1PE . I 4 NA A 1 908 2001 NA NA . J 5 HOH A 1 1001 504 HOH HOH . J 5 HOH A 2 1002 505 HOH HOH . J 5 HOH A 3 1003 507 HOH HOH . J 5 HOH A 4 1004 509 HOH HOH . J 5 HOH A 5 1005 510 HOH HOH . J 5 HOH A 6 1006 511 HOH HOH . J 5 HOH A 7 1007 512 HOH HOH . J 5 HOH A 8 1008 520 HOH HOH . J 5 HOH A 9 1009 521 HOH HOH . J 5 HOH A 10 1010 523 HOH HOH . J 5 HOH A 11 1011 524 HOH HOH . J 5 HOH A 12 1012 525 HOH HOH . J 5 HOH A 13 1013 526 HOH HOH . J 5 HOH A 14 1014 529 HOH HOH . J 5 HOH A 15 1015 530 HOH HOH . J 5 HOH A 16 1016 532 HOH HOH . J 5 HOH A 17 1017 534 HOH HOH . J 5 HOH A 18 1018 535 HOH HOH . J 5 HOH A 19 1019 536 HOH HOH . J 5 HOH A 20 1020 538 HOH HOH . J 5 HOH A 21 1021 539 HOH HOH . J 5 HOH A 22 1022 540 HOH HOH . J 5 HOH A 23 1023 543 HOH HOH . J 5 HOH A 24 1024 544 HOH HOH . J 5 HOH A 25 1025 545 HOH HOH . J 5 HOH A 26 1026 546 HOH HOH . J 5 HOH A 27 1027 549 HOH HOH . J 5 HOH A 28 1028 551 HOH HOH . J 5 HOH A 29 1029 553 HOH HOH . J 5 HOH A 30 1030 554 HOH HOH . J 5 HOH A 31 1031 555 HOH HOH . J 5 HOH A 32 1032 556 HOH HOH . J 5 HOH A 33 1033 558 HOH HOH . J 5 HOH A 34 1034 559 HOH HOH . J 5 HOH A 35 1035 561 HOH HOH . J 5 HOH A 36 1036 562 HOH HOH . J 5 HOH A 37 1037 564 HOH HOH . J 5 HOH A 38 1038 565 HOH HOH . J 5 HOH A 39 1039 566 HOH HOH . J 5 HOH A 40 1040 568 HOH HOH . J 5 HOH A 41 1041 570 HOH HOH . J 5 HOH A 42 1042 571 HOH HOH . J 5 HOH A 43 1043 572 HOH HOH . J 5 HOH A 44 1044 576 HOH HOH . J 5 HOH A 45 1045 577 HOH HOH . J 5 HOH A 46 1046 579 HOH HOH . J 5 HOH A 47 1047 580 HOH HOH . J 5 HOH A 48 1048 581 HOH HOH . J 5 HOH A 49 1049 582 HOH HOH . J 5 HOH A 50 1050 584 HOH HOH . J 5 HOH A 51 1051 585 HOH HOH . J 5 HOH A 52 1052 587 HOH HOH . J 5 HOH A 53 1053 589 HOH HOH . J 5 HOH A 54 1054 591 HOH HOH . J 5 HOH A 55 1055 593 HOH HOH . J 5 HOH A 56 1056 595 HOH HOH . J 5 HOH A 57 1057 600 HOH HOH . J 5 HOH A 58 1058 606 HOH HOH . J 5 HOH A 59 1059 607 HOH HOH . J 5 HOH A 60 1060 608 HOH HOH . J 5 HOH A 61 1061 609 HOH HOH . J 5 HOH A 62 1062 611 HOH HOH . J 5 HOH A 63 1063 612 HOH HOH . J 5 HOH A 64 1064 613 HOH HOH . J 5 HOH A 65 1065 614 HOH HOH . J 5 HOH A 66 1066 616 HOH HOH . J 5 HOH A 67 1067 617 HOH HOH . J 5 HOH A 68 1068 622 HOH HOH . J 5 HOH A 69 1069 624 HOH HOH . J 5 HOH A 70 1070 625 HOH HOH . J 5 HOH A 71 1071 626 HOH HOH . J 5 HOH A 72 1072 630 HOH HOH . J 5 HOH A 73 1073 631 HOH HOH . J 5 HOH A 74 1074 633 HOH HOH . J 5 HOH A 75 1075 634 HOH HOH . J 5 HOH A 76 1076 636 HOH HOH . J 5 HOH A 77 1077 637 HOH HOH . J 5 HOH A 78 1078 640 HOH HOH . J 5 HOH A 79 1079 646 HOH HOH . J 5 HOH A 80 1080 647 HOH HOH . J 5 HOH A 81 1081 649 HOH HOH . J 5 HOH A 82 1082 653 HOH HOH . J 5 HOH A 83 1083 654 HOH HOH . J 5 HOH A 84 1084 655 HOH HOH . J 5 HOH A 85 1085 656 HOH HOH . J 5 HOH A 86 1086 657 HOH HOH . J 5 HOH A 87 1087 667 HOH HOH . J 5 HOH A 88 1088 668 HOH HOH . J 5 HOH A 89 1089 670 HOH HOH . J 5 HOH A 90 1090 673 HOH HOH . J 5 HOH A 91 1091 678 HOH HOH . J 5 HOH A 92 1092 694 HOH HOH . J 5 HOH A 93 1093 695 HOH HOH . J 5 HOH A 94 1094 696 HOH HOH . J 5 HOH A 95 1095 706 HOH HOH . J 5 HOH A 96 1096 707 HOH HOH . J 5 HOH A 97 1097 708 HOH HOH . J 5 HOH A 98 1098 709 HOH HOH . J 5 HOH A 99 1099 712 HOH HOH . J 5 HOH A 100 1100 716 HOH HOH . J 5 HOH A 101 1101 719 HOH HOH . J 5 HOH A 102 1102 724 HOH HOH . J 5 HOH A 103 1103 727 HOH HOH . J 5 HOH A 104 1104 728 HOH HOH . J 5 HOH A 105 1105 729 HOH HOH . J 5 HOH A 106 1106 731 HOH HOH . J 5 HOH A 107 1107 732 HOH HOH . J 5 HOH A 108 1108 734 HOH HOH . J 5 HOH A 109 1109 741 HOH HOH . J 5 HOH A 110 1110 742 HOH HOH . J 5 HOH A 111 1111 743 HOH HOH . J 5 HOH A 112 1112 748 HOH HOH . J 5 HOH A 113 1113 749 HOH HOH . J 5 HOH A 114 1114 750 HOH HOH . J 5 HOH A 115 1115 753 HOH HOH . J 5 HOH A 116 1116 757 HOH HOH . J 5 HOH A 117 1117 761 HOH HOH . J 5 HOH A 118 1118 763 HOH HOH . J 5 HOH A 119 1119 769 HOH HOH . J 5 HOH A 120 1120 773 HOH HOH . J 5 HOH A 121 1121 774 HOH HOH . J 5 HOH A 122 1122 777 HOH HOH . J 5 HOH A 123 1123 779 HOH HOH . J 5 HOH A 124 1124 781 HOH HOH . J 5 HOH A 125 1125 784 HOH HOH . J 5 HOH A 126 1126 785 HOH HOH . J 5 HOH A 127 1127 788 HOH HOH . J 5 HOH A 128 1128 791 HOH HOH . J 5 HOH A 129 1129 793 HOH HOH . J 5 HOH A 130 1130 796 HOH HOH . J 5 HOH A 131 1131 798 HOH HOH . J 5 HOH A 132 1132 799 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . G 3 222.66 -47.973 23.509 1 146.3 ? OH2 1PE 906 A 1 HETATM 2 C C12 1PE . . . G 3 223.164 -49.123 24.264 1 145.72 ? C12 1PE 906 A 1 HETATM 3 C C22 1PE . . . G 3 222.505 -49.187 25.693 1 144.06 ? C22 1PE 906 A 1 HETATM 4 O OH3 1PE . . . G 3 222.04 -50.577 25.878 1 142.41 ? OH3 1PE 906 A 1 HETATM 5 C C13 1PE . . . G 3 220.498 -52.029 26.949 1 138.59 ? C13 1PE 906 A 1 HETATM 6 C C23 1PE . . . G 3 221.379 -50.797 27.205 1 140.12 ? C23 1PE 906 A 1 HETATM 7 O OH4 1PE . . . G 3 219.423 -51.577 26.07 1 138.75 ? OH4 1PE 906 A 1 HETATM 8 C C14 1PE . . . G 3 217.389 -52.12 24.801 1 138.59 ? C14 1PE 906 A 1 HETATM 9 C C24 1PE . . . G 3 218.464 -52.675 25.716 1 138.26 ? C24 1PE 906 A 1 HETATM 10 O OH5 1PE . . . G 3 218.106 -51.435 23.754 1 139.49 ? OH5 1PE 906 A 1 HETATM 11 C C15 1PE . . . G 3 217.929 -50.134 21.73 1 141.88 ? C15 1PE 906 A 1 HETATM 12 C C25 1PE . . . G 3 217.159 -50.844 22.808 1 140.37 ? C25 1PE 906 A 1 HETATM 13 O OH6 1PE . . . G 3 218.042 -48.742 22.074 1 143.43 ? OH6 1PE 906 A 1 HETATM 14 C C16 1PE . . . G 3 218.074 -46.326 21.638 1 142.04 ? C16 1PE 906 A 1 HETATM 15 C C26 1PE . . . G 3 218.119 -47.726 21.027 1 143.22 ? C26 1PE 906 A 1 HETATM 16 O OH7 1PE . . . G 3 216.884 -45.499 21.291 1 140.68 ? OH7 1PE 906 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 16 #