data_4NMH
#
_model_server_result.job_id            T6OVZ0Awyl_Qegnv2xY80Q 
_model_server_result.datetime_utc      '2024-12-18 00:57:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nmh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":302}' 
#
_entry.id    4NMH 
#
_exptl.entry_id    4NMH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.67 
_cell.angle_gamma         90 
_cell.entry_id            4NMH 
_cell.length_a            96.132 
_cell.length_b            70.842 
_cell.length_c            95.653 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NMH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,S,T 1 1 
C,D,L,M,N,O,P,Q,R,U,V 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 M N N 
? 3 Q N N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 285 n n 
PA O2A NDP sing 286 n n 
PA O5B NDP sing 287 n n 
PA O3 NDP sing 288 n n 
O2A HOA2 NDP sing 289 n n 
O5B C5B NDP sing 290 n n 
C5B C4B NDP sing 291 n n 
C5B H51A NDP sing 292 n n 
C5B H52A NDP sing 293 n n 
C4B O4B NDP sing 294 n n 
C4B C3B NDP sing 295 n n 
C4B H4B NDP sing 296 n n 
O4B C1B NDP sing 297 n n 
C3B O3B NDP sing 298 n n 
C3B C2B NDP sing 299 n n 
C3B H3B NDP sing 300 n n 
O3B HO3A NDP sing 301 n n 
C2B O2B NDP sing 302 n n 
C2B C1B NDP sing 303 n n 
C2B H2B NDP sing 304 n n 
O2B P2B NDP sing 305 n n 
C1B N9A NDP sing 306 n n 
C1B H1B NDP sing 307 n n 
N9A C8A NDP sing 308 n y 
N9A C4A NDP sing 309 n y 
C8A N7A NDP doub 310 n y 
C8A H8A NDP sing 311 n n 
N7A C5A NDP sing 312 n y 
C5A C6A NDP sing 313 n y 
C5A C4A NDP doub 314 n y 
C6A N6A NDP sing 315 n n 
C6A N1A NDP doub 316 n y 
N6A H61A NDP sing 317 n n 
N6A H62A NDP sing 318 n n 
N1A C2A NDP sing 319 n y 
C2A N3A NDP doub 320 n y 
C2A H2A NDP sing 321 n n 
N3A C4A NDP sing 322 n y 
O3 PN NDP sing 323 n n 
PN O1N NDP doub 324 n n 
PN O2N NDP sing 325 n n 
PN O5D NDP sing 326 n n 
O2N H21N NDP sing 327 n n 
O5D C5D NDP sing 328 n n 
C5D C4D NDP sing 329 n n 
C5D H51N NDP sing 330 n n 
C5D H52N NDP sing 331 n n 
C4D O4D NDP sing 332 n n 
C4D C3D NDP sing 333 n n 
C4D H4D NDP sing 334 n n 
O4D C1D NDP sing 335 n n 
C3D O3D NDP sing 336 n n 
C3D C2D NDP sing 337 n n 
C3D H3D NDP sing 338 n n 
O3D HO3N NDP sing 339 n n 
C2D O2D NDP sing 340 n n 
C2D C1D NDP sing 341 n n 
C2D H2D NDP sing 342 n n 
O2D HO2N NDP sing 343 n n 
C1D N1N NDP sing 344 n n 
C1D H1D NDP sing 345 n n 
N1N C2N NDP sing 346 n n 
N1N C6N NDP sing 347 n n 
C2N C3N NDP doub 348 n n 
C2N H2N NDP sing 349 n n 
C3N C7N NDP sing 350 n n 
C3N C4N NDP sing 351 n n 
C7N O7N NDP doub 352 n n 
C7N N7N NDP sing 353 n n 
N7N H71N NDP sing 354 n n 
N7N H72N NDP sing 355 n n 
C4N C5N NDP sing 356 n n 
C4N H41N NDP sing 357 n n 
C4N H42N NDP sing 358 n n 
C5N C6N NDP doub 359 n n 
C5N H5N NDP sing 360 n n 
C6N H6N NDP sing 361 n n 
P2B O1X NDP doub 362 n n 
P2B O2X NDP sing 363 n n 
P2B O3X NDP sing 364 n n 
O2X HOP2 NDP sing 365 n n 
O3X HOP3 NDP sing 366 n n 
#
_atom_sites.entry_id                     4NMH 
_atom_sites.fract_transf_matrix[1][1]    0.010402 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000303 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014116 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010459 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 2KG A 1 301 1 2KG INX . 
F 3 NDP A 1 302 3 NDP NDP . 
G 4 SO4 A 1 303 1 SO4 SO4 . 
H 2 2KG B 1 301 2 2KG INX . 
I 3 NDP B 1 302 4 NDP NDP . 
J 4 SO4 B 1 303 2 SO4 SO4 . 
K 4 SO4 B 1 304 3 SO4 SO4 . 
L 2 2KG C 1 301 3 2KG INX . 
M 3 NDP C 1 302 1 NDP NDP . 
N 4 SO4 C 1 303 4 SO4 SO4 . 
O 4 SO4 C 1 304 6 SO4 SO4 . 
P 2 2KG D 1 301 4 2KG INX . 
Q 3 NDP D 1 302 2 NDP NDP . 
R 4 SO4 D 1 303 5 SO4 SO4 . 
S 5 HOH A 1 401 1 HOH HOH . 
S 5 HOH A 2 402 3 HOH HOH . 
S 5 HOH A 3 403 5 HOH HOH . 
S 5 HOH A 4 404 14 HOH HOH . 
S 5 HOH A 5 405 26 HOH HOH . 
S 5 HOH A 6 406 32 HOH HOH . 
T 5 HOH B 1 401 2 HOH HOH . 
T 5 HOH B 2 402 7 HOH HOH . 
T 5 HOH B 3 403 10 HOH HOH . 
T 5 HOH B 4 404 20 HOH HOH . 
U 5 HOH C 1 401 4 HOH HOH . 
U 5 HOH C 2 402 6 HOH HOH . 
U 5 HOH C 3 403 12 HOH HOH . 
U 5 HOH C 4 404 15 HOH HOH . 
U 5 HOH C 5 405 16 HOH HOH . 
U 5 HOH C 6 406 18 HOH HOH . 
U 5 HOH C 7 407 21 HOH HOH . 
U 5 HOH C 8 408 24 HOH HOH . 
U 5 HOH C 9 409 25 HOH HOH . 
U 5 HOH C 10 410 28 HOH HOH . 
U 5 HOH C 11 411 30 HOH HOH . 
U 5 HOH C 12 412 31 HOH HOH . 
U 5 HOH C 13 413 33 HOH HOH . 
V 5 HOH D 1 401 8 HOH HOH . 
V 5 HOH D 2 402 9 HOH HOH . 
V 5 HOH D 3 403 11 HOH HOH . 
V 5 HOH D 4 404 13 HOH HOH . 
V 5 HOH D 5 405 17 HOH HOH . 
V 5 HOH D 6 406 19 HOH HOH . 
V 5 HOH D 7 407 22 HOH HOH . 
V 5 HOH D 8 408 23 HOH HOH . 
V 5 HOH D 9 409 27 HOH HOH . 
V 5 HOH D 10 410 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . M 3 -42.614 -35.67 65.984 1 16.45 ? PA NDP 302 C 1 
HETATM 2 O O1A NDP . . . M 3 -41.889 -36.433 67.02 1 11.95 ? O1A NDP 302 C 1 
HETATM 3 O O2A NDP . . . M 3 -43.469 -36.552 65.158 1 15.73 ? O2A NDP 302 C 1 
HETATM 4 O O5B NDP . . . M 3 -43.507 -34.535 66.677 1 17.97 ? O5B NDP 302 C 1 
HETATM 5 C C5B NDP . . . M 3 -44.264 -33.648 65.885 1 19.29 ? C5B NDP 302 C 1 
HETATM 6 C C4B NDP . . . M 3 -44.948 -32.631 66.789 1 20.27 ? C4B NDP 302 C 1 
HETATM 7 O O4B NDP . . . M 3 -45.751 -31.759 66.013 1 19.22 ? O4B NDP 302 C 1 
HETATM 8 C C3B NDP . . . M 3 -45.858 -33.321 67.799 1 20.99 ? C3B NDP 302 C 1 
HETATM 9 O O3B NDP . . . M 3 -45.722 -32.749 69.083 1 19.92 ? O3B NDP 302 C 1 
HETATM 10 C C2B NDP . . . M 3 -47.241 -33.111 67.23 1 20.61 ? C2B NDP 302 C 1 
HETATM 11 O O2B NDP . . . M 3 -48.222 -33.05 68.24 1 20.98 ? O2B NDP 302 C 1 
HETATM 12 C C1B NDP . . . M 3 -47.089 -31.806 66.464 1 19.04 ? C1B NDP 302 C 1 
HETATM 13 N N9A NDP . . . M 3 -48.028 -31.737 65.338 1 17.18 ? N9A NDP 302 C 1 
HETATM 14 C C8A NDP . . . M 3 -48.164 -32.63 64.308 1 18.19 ? C8A NDP 302 C 1 
HETATM 15 N N7A NDP . . . M 3 -49.148 -32.192 63.489 1 18.06 ? N7A NDP 302 C 1 
HETATM 16 C C5A NDP . . . M 3 -49.631 -31.035 63.988 1 17.12 ? C5A NDP 302 C 1 
HETATM 17 C C6A NDP . . . M 3 -50.635 -30.182 63.554 1 18.39 ? C6A NDP 302 C 1 
HETATM 18 N N6A NDP . . . M 3 -51.558 -30.658 62.723 1 17.97 ? N6A NDP 302 C 1 
HETATM 19 N N1A NDP . . . M 3 -50.909 -29.049 64.299 1 17.83 ? N1A NDP 302 C 1 
HETATM 20 C C2A NDP . . . M 3 -50.207 -28.767 65.456 1 17.11 ? C2A NDP 302 C 1 
HETATM 21 N N3A NDP . . . M 3 -49.213 -29.625 65.877 1 16.32 ? N3A NDP 302 C 1 
HETATM 22 C C4A NDP . . . M 3 -48.935 -30.738 65.152 1 15.85 ? C4A NDP 302 C 1 
HETATM 23 O O3 NDP . . . M 3 -41.603 -34.824 65.051 1 18.76 ? O3 NDP 302 C 1 
HETATM 24 P PN NDP . . . M 3 -40.007 -34.824 65.261 1 17.72 ? PN NDP 302 C 1 
HETATM 25 O O1N NDP . . . M 3 -39.475 -36.071 64.672 1 13.17 ? O1N NDP 302 C 1 
HETATM 26 O O2N NDP . . . M 3 -39.71 -34.48 66.671 1 18.78 ? O2N NDP 302 C 1 
HETATM 27 O O5D NDP . . . M 3 -39.575 -33.584 64.333 1 19.99 ? O5D NDP 302 C 1 
HETATM 28 C C5D NDP . . . M 3 -39.643 -32.251 64.799 1 21.52 ? C5D NDP 302 C 1 
HETATM 29 C C4D NDP . . . M 3 -38.967 -31.332 63.789 1 21.1 ? C4D NDP 302 C 1 
HETATM 30 O O4D NDP . . . M 3 -37.666 -31.816 63.517 1 21.73 ? O4D NDP 302 C 1 
HETATM 31 C C3D NDP . . . M 3 -39.724 -31.288 62.472 1 21.18 ? C3D NDP 302 C 1 
HETATM 32 O O3D NDP . . . M 3 -39.864 -29.963 62.012 1 19.28 ? O3D NDP 302 C 1 
HETATM 33 C C2D NDP . . . M 3 -38.862 -32.082 61.523 1 22.49 ? C2D NDP 302 C 1 
HETATM 34 O O2D NDP . . . M 3 -38.955 -31.593 60.204 1 25.4 ? O2D NDP 302 C 1 
HETATM 35 C C1D NDP . . . M 3 -37.472 -31.935 62.123 1 20.98 ? C1D NDP 302 C 1 
HETATM 36 N N1N NDP . . . M 3 -36.593 -33.075 61.792 1 18.55 ? N1N NDP 302 C 1 
HETATM 37 C C2N NDP . . . M 3 -36.773 -34.306 62.368 1 15.72 ? C2N NDP 302 C 1 
HETATM 38 C C3N NDP . . . M 3 -35.925 -35.381 62.095 1 17.97 ? C3N NDP 302 C 1 
HETATM 39 C C7N NDP . . . M 3 -36.185 -36.746 62.64 1 18.74 ? C7N NDP 302 C 1 
HETATM 40 O O7N NDP . . . M 3 -35.484 -37.824 62.061 1 19.06 ? O7N NDP 302 C 1 
HETATM 41 N N7N NDP . . . M 3 -37.032 -36.93 63.647 1 20.65 ? N7N NDP 302 C 1 
HETATM 42 C C4N NDP . . . M 3 -35.034 -35.305 60.882 1 19.51 ? C4N NDP 302 C 1 
HETATM 43 C C5N NDP . . . M 3 -34.913 -33.928 60.313 1 19.92 ? C5N NDP 302 C 1 
HETATM 44 C C6N NDP . . . M 3 -35.704 -32.89 60.776 1 19.89 ? C6N NDP 302 C 1 
HETATM 45 P P2B NDP . . . M 3 -49.702 -33.626 67.984 1 20.94 ? P2B NDP 302 C 1 
HETATM 46 O O1X NDP . . . M 3 -50.411 -33.683 69.317 1 21.66 ? O1X NDP 302 C 1 
HETATM 47 O O2X NDP . . . M 3 -49.645 -34.996 67.352 1 20.77 ? O2X NDP 302 C 1 
HETATM 48 O O3X NDP . . . M 3 -50.439 -32.699 67.062 1 18.59 ? O3X NDP 302 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#