data_4NQ5
#
_model_server_result.job_id            hNOhtEPq0qSg6n2dbkM5cg 
_model_server_result.datetime_utc      '2024-11-18 21:46:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nq5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    4NQ5 
#
_exptl.entry_id    4NQ5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              237.363 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3R,5R,7aS)-5-(sulfanylmethyl)tetrahydro[1,3]thiazolo[4,3-b][1,3]thiazole-3-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.01 
_cell.angle_gamma         90 
_cell.entry_id            4NQ5 
_cell.length_a            53.172 
_cell.length_b            60.828 
_cell.length_c            69.41 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NQ5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 81 A HIS 86 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc2 A ND1 HIS 83 A HIS 88 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc3 A OD2 ASP 85 A ASP 90 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc4 A NE2 HIS 144 A HIS 149 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc5 A SG CYS 163 A CYS 168 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc6 A NE2 HIS 205 A HIS 210 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc7 B ZN ZN . A ZN 301 1_555 D S01 3C7 . A 3C7 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc8 C ZN ZN . A ZN 302 1_555 D S01 3C7 . A 3C7 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
#
_chem_comp.formula           'C7 H11 N O2 S3' 
_chem_comp.formula_weight    237.363 
_chem_comp.id                3C7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3R,5R,7aS)-5-(sulfanylmethyl)tetrahydro[1,3]thiazolo[4,3-b][1,3]thiazole-3-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 C09 3C7 doub 1 n n 
C09 C08 3C7 sing 2 n n 
C09 O11 3C7 sing 3 n n 
S01 C02 3C7 sing 4 n n 
C08 C12 3C7 sing 5 n n 
C08 N07 3C7 sing 6 n n 
C12 S13 3C7 sing 7 n n 
N07 C03 3C7 sing 8 n n 
N07 C06 3C7 sing 9 n n 
C02 C03 3C7 sing 10 n n 
C03 S04 3C7 sing 11 n n 
S13 C06 3C7 sing 12 n n 
C06 C05 3C7 sing 13 n n 
S04 C05 3C7 sing 14 n n 
C12 H122 3C7 sing 15 n n 
C12 H121 3C7 sing 16 n n 
O11 H1 3C7 sing 17 n n 
C08 H08 3C7 sing 18 n n 
C03 H03 3C7 sing 19 n n 
C02 H021 3C7 sing 20 n n 
C02 H022 3C7 sing 21 n n 
S01 HS01 3C7 sing 22 n n 
C06 H06 3C7 sing 23 n n 
C05 H052 3C7 sing 24 n n 
C05 H051 3C7 sing 25 n n 
#
_atom_sites.entry_id                     4NQ5 
_atom_sites.fract_transf_matrix[1][1]    0.018807 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000989 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01644 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014427 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 1 ZN ZN . 
C 2 ZN A 1 302 2 ZN ZN . 
D 3 3C7 A 1 303 1 3C7 3C7 . 
E 4 K A 1 304 1 K K . 
F 5 HOH A 1 401 1 HOH HOH . 
F 5 HOH A 2 402 2 HOH HOH . 
F 5 HOH A 3 403 4 HOH HOH . 
F 5 HOH A 4 404 6 HOH HOH . 
F 5 HOH A 5 405 8 HOH HOH . 
F 5 HOH A 6 406 9 HOH HOH . 
F 5 HOH A 7 407 10 HOH HOH . 
F 5 HOH A 8 408 11 HOH HOH . 
F 5 HOH A 9 409 12 HOH HOH . 
F 5 HOH A 10 410 13 HOH HOH . 
F 5 HOH A 11 411 14 HOH HOH . 
F 5 HOH A 12 412 16 HOH HOH . 
F 5 HOH A 13 413 19 HOH HOH . 
F 5 HOH A 14 414 20 HOH HOH . 
F 5 HOH A 15 415 21 HOH HOH . 
F 5 HOH A 16 416 22 HOH HOH . 
F 5 HOH A 17 417 23 HOH HOH . 
F 5 HOH A 18 418 24 HOH HOH . 
F 5 HOH A 19 419 25 HOH HOH . 
F 5 HOH A 20 420 26 HOH HOH . 
F 5 HOH A 21 421 27 HOH HOH . 
F 5 HOH A 22 422 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C12 3C7 . . . D 3 12.507 10.279 25.429 1 80.55 ? C12 3C7 303 A 1 
HETATM 2 O O11 3C7 . . . D 3 11.126 9.187 28.556 1 63.66 ? O11 3C7 303 A 1 
HETATM 3 C C09 3C7 . . . D 3 11.933 9.086 27.606 1 69.64 ? C09 3C7 303 A 1 
HETATM 4 O O10 3C7 . . . D 3 13.114 8.691 27.698 1 70.47 ? O10 3C7 303 A 1 
HETATM 5 C C08 3C7 . . . D 3 11.428 9.467 26.194 1 73.68 ? C08 3C7 303 A 1 
HETATM 6 N N07 3C7 . . . D 3 10.144 10.238 26.256 1 72.75 ? N07 3C7 303 A 1 
HETATM 7 C C03 3C7 . . . D 3 9.332 10.166 25.002 1 66.42 ? C03 3C7 303 A 1 
HETATM 8 C C02 3C7 . . . D 3 8.012 9.435 25.18 1 59.58 ? C02 3C7 303 A 1 
HETATM 9 S S01 3C7 . . . D 3 8.615 7.723 25.077 1 53.03 ? S01 3C7 303 A 1 
HETATM 10 S S13 3C7 . . . D 3 12.05 11.959 25.799 1 75.29 ? S13 3C7 303 A 1 
HETATM 11 C C06 3C7 . . . D 3 10.488 11.661 26.599 1 75.19 ? C06 3C7 303 A 1 
HETATM 12 C C05 3C7 . . . D 3 9.209 12.516 26.236 1 72.7 ? C05 3C7 303 A 1 
HETATM 13 S S04 3C7 . . . D 3 8.832 11.834 24.636 1 66.32 ? S04 3C7 303 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           13 
#