data_4NQJ # _model_server_result.job_id Q3RwIm-QEAC84RqHF7DiBg _model_server_result.datetime_utc '2024-11-13 10:05:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nqj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 4NQJ # _exptl.entry_id 4NQJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NQJ _cell.length_a 83.097 _cell.length_b 101.064 _cell.length_c 233.252 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NQJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 116.626 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 194 n n C1B O1B LMT sing 195 n n C1B O5B LMT sing 196 n n C1B H1B LMT sing 197 n n C2B C3B LMT sing 198 n n C2B O2B LMT sing 199 n n C2B H2B LMT sing 200 n n C3B C4B LMT sing 201 n n C3B O3B LMT sing 202 n n C3B H3B LMT sing 203 n n C4B C5B LMT sing 204 n n C4B O4' LMT sing 205 n n C4B H4B LMT sing 206 n n C5B C6B LMT sing 207 n n C5B O5B LMT sing 208 n n C5B H5B LMT sing 209 n n C6B O6B LMT sing 210 n n C6B "H6'2" LMT sing 211 n n C6B "H6'1" LMT sing 212 n n O1B C4' LMT sing 213 n n O2B H2O1 LMT sing 214 n n O3B H3O1 LMT sing 215 n n O4' H4O1 LMT sing 216 n n O6B H6B LMT sing 217 n n C1' C2' LMT sing 218 n n C1' O1' LMT sing 219 n n C1' O5' LMT sing 220 n n C1' H1' LMT sing 221 n n C2' C3' LMT sing 222 n n C2' O2' LMT sing 223 n n C2' H2' LMT sing 224 n n C3' C4' LMT sing 225 n n C3' O3' LMT sing 226 n n C3' H3' LMT sing 227 n n C4' C5' LMT sing 228 n n C4' H4' LMT sing 229 n n C5' C6' LMT sing 230 n n C5' O5' LMT sing 231 n n C5' H5' LMT sing 232 n n C6' O6' LMT sing 233 n n C6' H6D LMT sing 234 n n C6' H6E LMT sing 235 n n O1' C1 LMT sing 236 n n O2' H2O2 LMT sing 237 n n O3' H3O2 LMT sing 238 n n O6' H6' LMT sing 239 n n C1 C2 LMT sing 240 n n C1 H12 LMT sing 241 n n C1 H11 LMT sing 242 n n C2 C3 LMT sing 243 n n C2 H22 LMT sing 244 n n C2 H21 LMT sing 245 n n C3 C4 LMT sing 246 n n C3 H32 LMT sing 247 n n C3 H31 LMT sing 248 n n C4 C5 LMT sing 249 n n C4 H42 LMT sing 250 n n C4 H41 LMT sing 251 n n C5 C6 LMT sing 252 n n C5 H52 LMT sing 253 n n C5 H51 LMT sing 254 n n C6 C7 LMT sing 255 n n C6 H62 LMT sing 256 n n C6 H61 LMT sing 257 n n C7 C8 LMT sing 258 n n C7 H72 LMT sing 259 n n C7 H71 LMT sing 260 n n C8 C9 LMT sing 261 n n C8 H82 LMT sing 262 n n C8 H81 LMT sing 263 n n C9 C10 LMT sing 264 n n C9 H92 LMT sing 265 n n C9 H91 LMT sing 266 n n C10 C11 LMT sing 267 n n C10 H102 LMT sing 268 n n C10 H101 LMT sing 269 n n C11 C12 LMT sing 270 n n C11 H112 LMT sing 271 n n C11 H111 LMT sing 272 n n C12 H123 LMT sing 273 n n C12 H122 LMT sing 274 n n C12 H121 LMT sing 275 n n # _atom_sites.entry_id 4NQJ _atom_sites.fract_transf_matrix[1][1] 0.012034 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 LMT A 1 401 1 LMT LMT . E 2 LMT A 1 402 1 LMT LMT . F 2 LMT B 1 401 1 LMT LMT . G 2 LMT C 1 401 1 LMT LMT . H 2 LMT C 1 402 1 LMT LMT . I 3 HOH A 1 501 2 HOH HOH . I 3 HOH A 2 502 6 HOH HOH . I 3 HOH A 3 503 7 HOH HOH . I 3 HOH A 4 504 9 HOH HOH . I 3 HOH A 5 505 13 HOH HOH . I 3 HOH A 6 506 14 HOH HOH . I 3 HOH A 7 507 17 HOH HOH . I 3 HOH A 8 508 18 HOH HOH . I 3 HOH A 9 509 20 HOH HOH . I 3 HOH A 10 510 24 HOH HOH . I 3 HOH A 11 511 25 HOH HOH . I 3 HOH A 12 512 28 HOH HOH . I 3 HOH A 13 513 29 HOH HOH . I 3 HOH A 14 514 31 HOH HOH . I 3 HOH A 15 515 39 HOH HOH . I 3 HOH A 16 516 40 HOH HOH . I 3 HOH A 17 517 41 HOH HOH . I 3 HOH A 18 518 56 HOH HOH . I 3 HOH A 19 519 58 HOH HOH . I 3 HOH A 20 520 60 HOH HOH . I 3 HOH A 21 521 66 HOH HOH . I 3 HOH A 22 522 69 HOH HOH . I 3 HOH A 23 523 75 HOH HOH . I 3 HOH A 24 524 77 HOH HOH . I 3 HOH A 25 525 78 HOH HOH . I 3 HOH A 26 526 82 HOH HOH . I 3 HOH A 27 527 84 HOH HOH . I 3 HOH A 28 528 86 HOH HOH . I 3 HOH A 29 529 87 HOH HOH . I 3 HOH A 30 530 93 HOH HOH . I 3 HOH A 31 531 99 HOH HOH . I 3 HOH A 32 532 100 HOH HOH . I 3 HOH A 33 533 102 HOH HOH . I 3 HOH A 34 534 105 HOH HOH . I 3 HOH A 35 535 108 HOH HOH . I 3 HOH A 36 536 109 HOH HOH . I 3 HOH A 37 537 113 HOH HOH . I 3 HOH A 38 538 118 HOH HOH . I 3 HOH A 39 539 121 HOH HOH . I 3 HOH A 40 540 125 HOH HOH . I 3 HOH A 41 541 126 HOH HOH . I 3 HOH A 42 542 127 HOH HOH . I 3 HOH A 43 543 129 HOH HOH . I 3 HOH A 44 544 130 HOH HOH . I 3 HOH A 45 545 131 HOH HOH . I 3 HOH A 46 546 133 HOH HOH . I 3 HOH A 47 547 135 HOH HOH . I 3 HOH A 48 548 137 HOH HOH . I 3 HOH A 49 549 140 HOH HOH . I 3 HOH A 50 550 145 HOH HOH . I 3 HOH A 51 551 148 HOH HOH . I 3 HOH A 52 552 149 HOH HOH . I 3 HOH A 53 553 152 HOH HOH . I 3 HOH A 54 554 155 HOH HOH . I 3 HOH A 55 555 156 HOH HOH . I 3 HOH A 56 556 157 HOH HOH . I 3 HOH A 57 557 160 HOH HOH . I 3 HOH A 58 558 161 HOH HOH . I 3 HOH A 59 559 162 HOH HOH . I 3 HOH A 60 560 164 HOH HOH . I 3 HOH A 61 561 170 HOH HOH . I 3 HOH A 62 562 173 HOH HOH . I 3 HOH A 63 563 176 HOH HOH . I 3 HOH A 64 564 178 HOH HOH . I 3 HOH A 65 565 182 HOH HOH . I 3 HOH A 66 566 183 HOH HOH . I 3 HOH A 67 567 184 HOH HOH . I 3 HOH A 68 568 185 HOH HOH . I 3 HOH A 69 569 189 HOH HOH . I 3 HOH A 70 570 192 HOH HOH . I 3 HOH A 71 571 193 HOH HOH . I 3 HOH A 72 572 195 HOH HOH . I 3 HOH A 73 573 196 HOH HOH . I 3 HOH A 74 574 191 HOH HOH . J 3 HOH B 1 501 1 HOH HOH . J 3 HOH B 2 502 8 HOH HOH . J 3 HOH B 3 503 10 HOH HOH . J 3 HOH B 4 504 11 HOH HOH . J 3 HOH B 5 505 12 HOH HOH . J 3 HOH B 6 506 16 HOH HOH . J 3 HOH B 7 507 21 HOH HOH . J 3 HOH B 8 508 32 HOH HOH . J 3 HOH B 9 509 33 HOH HOH . J 3 HOH B 10 510 34 HOH HOH . J 3 HOH B 11 511 35 HOH HOH . J 3 HOH B 12 512 36 HOH HOH . J 3 HOH B 13 513 37 HOH HOH . J 3 HOH B 14 514 38 HOH HOH . J 3 HOH B 15 515 42 HOH HOH . J 3 HOH B 16 516 44 HOH HOH . J 3 HOH B 17 517 46 HOH HOH . J 3 HOH B 18 518 49 HOH HOH . J 3 HOH B 19 519 51 HOH HOH . J 3 HOH B 20 520 52 HOH HOH . J 3 HOH B 21 521 53 HOH HOH . J 3 HOH B 22 522 55 HOH HOH . J 3 HOH B 23 523 57 HOH HOH . J 3 HOH B 24 524 59 HOH HOH . J 3 HOH B 25 525 61 HOH HOH . J 3 HOH B 26 526 62 HOH HOH . J 3 HOH B 27 527 63 HOH HOH . J 3 HOH B 28 528 64 HOH HOH . J 3 HOH B 29 529 65 HOH HOH . J 3 HOH B 30 530 68 HOH HOH . J 3 HOH B 31 531 72 HOH HOH . J 3 HOH B 32 532 74 HOH HOH . J 3 HOH B 33 533 76 HOH HOH . J 3 HOH B 34 534 79 HOH HOH . J 3 HOH B 35 535 80 HOH HOH . J 3 HOH B 36 536 85 HOH HOH . J 3 HOH B 37 537 90 HOH HOH . J 3 HOH B 38 538 94 HOH HOH . J 3 HOH B 39 539 96 HOH HOH . J 3 HOH B 40 540 101 HOH HOH . J 3 HOH B 41 541 106 HOH HOH . J 3 HOH B 42 542 107 HOH HOH . J 3 HOH B 43 543 110 HOH HOH . J 3 HOH B 44 544 111 HOH HOH . J 3 HOH B 45 545 112 HOH HOH . J 3 HOH B 46 546 119 HOH HOH . J 3 HOH B 47 547 122 HOH HOH . J 3 HOH B 48 548 123 HOH HOH . J 3 HOH B 49 549 124 HOH HOH . J 3 HOH B 50 550 128 HOH HOH . J 3 HOH B 51 551 132 HOH HOH . J 3 HOH B 52 552 134 HOH HOH . J 3 HOH B 53 553 139 HOH HOH . J 3 HOH B 54 554 141 HOH HOH . J 3 HOH B 55 555 142 HOH HOH . J 3 HOH B 56 556 144 HOH HOH . J 3 HOH B 57 557 147 HOH HOH . J 3 HOH B 58 558 153 HOH HOH . J 3 HOH B 59 559 154 HOH HOH . J 3 HOH B 60 560 158 HOH HOH . J 3 HOH B 61 561 165 HOH HOH . J 3 HOH B 62 562 166 HOH HOH . J 3 HOH B 63 563 167 HOH HOH . J 3 HOH B 64 564 171 HOH HOH . J 3 HOH B 65 565 174 HOH HOH . J 3 HOH B 66 566 175 HOH HOH . J 3 HOH B 67 567 177 HOH HOH . J 3 HOH B 68 568 180 HOH HOH . J 3 HOH B 69 569 181 HOH HOH . K 3 HOH C 1 501 3 HOH HOH . K 3 HOH C 2 502 4 HOH HOH . K 3 HOH C 3 503 5 HOH HOH . K 3 HOH C 4 504 15 HOH HOH . K 3 HOH C 5 505 19 HOH HOH . K 3 HOH C 6 506 22 HOH HOH . K 3 HOH C 7 507 23 HOH HOH . K 3 HOH C 8 508 26 HOH HOH . K 3 HOH C 9 509 27 HOH HOH . K 3 HOH C 10 510 30 HOH HOH . K 3 HOH C 11 511 43 HOH HOH . K 3 HOH C 12 512 45 HOH HOH . K 3 HOH C 13 513 47 HOH HOH . K 3 HOH C 14 514 48 HOH HOH . K 3 HOH C 15 515 50 HOH HOH . K 3 HOH C 16 516 54 HOH HOH . K 3 HOH C 17 517 67 HOH HOH . K 3 HOH C 18 518 70 HOH HOH . K 3 HOH C 19 519 71 HOH HOH . K 3 HOH C 20 520 73 HOH HOH . K 3 HOH C 21 521 81 HOH HOH . K 3 HOH C 22 522 83 HOH HOH . K 3 HOH C 23 523 88 HOH HOH . K 3 HOH C 24 524 89 HOH HOH . K 3 HOH C 25 525 91 HOH HOH . K 3 HOH C 26 526 92 HOH HOH . K 3 HOH C 27 527 95 HOH HOH . K 3 HOH C 28 528 97 HOH HOH . K 3 HOH C 29 529 98 HOH HOH . K 3 HOH C 30 530 103 HOH HOH . K 3 HOH C 31 531 104 HOH HOH . K 3 HOH C 32 532 114 HOH HOH . K 3 HOH C 33 533 115 HOH HOH . K 3 HOH C 34 534 116 HOH HOH . K 3 HOH C 35 535 117 HOH HOH . K 3 HOH C 36 536 120 HOH HOH . K 3 HOH C 37 537 136 HOH HOH . K 3 HOH C 38 538 138 HOH HOH . K 3 HOH C 39 539 143 HOH HOH . K 3 HOH C 40 540 146 HOH HOH . K 3 HOH C 41 541 150 HOH HOH . K 3 HOH C 42 542 151 HOH HOH . K 3 HOH C 43 543 159 HOH HOH . K 3 HOH C 44 544 163 HOH HOH . K 3 HOH C 45 545 168 HOH HOH . K 3 HOH C 46 546 169 HOH HOH . K 3 HOH C 47 547 172 HOH HOH . K 3 HOH C 48 548 179 HOH HOH . K 3 HOH C 49 549 186 HOH HOH . K 3 HOH C 50 550 187 HOH HOH . K 3 HOH C 51 551 188 HOH HOH . K 3 HOH C 52 552 190 HOH HOH . K 3 HOH C 53 553 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . D 2 56.168 -34.898 -5.817 1 61.57 ? C1B LMT 401 A 1 HETATM 2 C C2B LMT . . . D 2 55.489 -36.267 -5.635 1 67.82 ? C2B LMT 401 A 1 HETATM 3 C C3B LMT . . . D 2 56.596 -37.317 -5.266 1 72.42 ? C3B LMT 401 A 1 HETATM 4 C C4B LMT . . . D 2 57.655 -37.302 -6.405 1 59.54 ? C4B LMT 401 A 1 HETATM 5 C C5B LMT . . . D 2 58.236 -35.869 -6.43 1 64.88 ? C5B LMT 401 A 1 HETATM 6 C C6B LMT . . . D 2 59.442 -35.683 -7.38 1 72.07 ? C6B LMT 401 A 1 HETATM 7 O O1B LMT . . . D 2 56.817 -34.688 -4.578 1 66.89 ? O1B LMT 401 A 1 HETATM 8 O O2B LMT . . . D 2 54.581 -36.241 -4.573 1 78.03 ? O2B LMT 401 A 1 HETATM 9 O O3B LMT . . . D 2 56.097 -38.606 -5.257 1 77.85 ? O3B LMT 401 A 1 HETATM 10 O O4' LMT . . . D 2 58.742 -38.108 -6.075 1 63.7 ? O4' LMT 401 A 1 HETATM 11 O O5B LMT . . . D 2 57.179 -34.982 -6.801 1 62.98 ? O5B LMT 401 A 1 HETATM 12 O O6B LMT . . . D 2 59.071 -36.225 -8.642 1 82.89 ? O6B LMT 401 A 1 HETATM 13 C C1' LMT . . . D 2 56.697 -30.732 -3.386 1 80.69 ? C1' LMT 401 A 1 HETATM 14 C C2' LMT . . . D 2 57.886 -31.198 -4.288 1 87.17 ? C2' LMT 401 A 1 HETATM 15 C C3' LMT . . . D 2 57.279 -32.278 -5.162 1 89.59 ? C3' LMT 401 A 1 HETATM 16 C C4' LMT . . . D 2 56.915 -33.351 -4.057 1 64.64 ? C4' LMT 401 A 1 HETATM 17 C C5' LMT . . . D 2 55.609 -32.837 -3.363 1 75.9 ? C5' LMT 401 A 1 HETATM 18 C C6' LMT . . . D 2 54.939 -33.808 -2.407 1 72.03 ? C6' LMT 401 A 1 HETATM 19 O O1' LMT . . . D 2 57.209 -29.821 -2.473 1 75.83 ? O1' LMT 401 A 1 HETATM 20 O O2' LMT . . . D 2 58.301 -30.211 -5.184 1 100.05 ? O2' LMT 401 A 1 HETATM 21 O O3' LMT . . . D 2 58.228 -32.703 -6.096 1 86.96 ? O3' LMT 401 A 1 HETATM 22 O O5' LMT . . . D 2 56.122 -31.776 -2.564 1 86.08 ? O5' LMT 401 A 1 HETATM 23 O O6' LMT . . . D 2 54.689 -33.048 -1.233 1 79.63 ? O6' LMT 401 A 1 HETATM 24 C C1 LMT . . . D 2 56.15 -29.317 -1.738 1 53.96 ? C1 LMT 401 A 1 HETATM 25 C C2 LMT . . . D 2 56.564 -27.902 -1.342 1 54.44 ? C2 LMT 401 A 1 HETATM 26 C C3 LMT . . . D 2 56.302 -27.821 0.184 1 52.56 ? C3 LMT 401 A 1 HETATM 27 C C4 LMT . . . D 2 55.821 -26.418 0.538 1 43.55 ? C4 LMT 401 A 1 HETATM 28 C C5 LMT . . . D 2 55.855 -26.289 2.076 1 53.33 ? C5 LMT 401 A 1 HETATM 29 C C6 LMT . . . D 2 55.015 -25.111 2.523 1 52.74 ? C6 LMT 401 A 1 HETATM 30 C C7 LMT . . . D 2 55.231 -24.964 4.03 1 58.1 ? C7 LMT 401 A 1 HETATM 31 C C8 LMT . . . D 2 56.655 -24.52 4.385 1 64.44 ? C8 LMT 401 A 1 HETATM 32 C C9 LMT . . . D 2 56.883 -24.779 5.903 1 53.85 ? C9 LMT 401 A 1 HETATM 33 C C10 LMT . . . D 2 58.147 -24.037 6.388 1 54.85 ? C10 LMT 401 A 1 HETATM 34 C C11 LMT . . . D 2 58.2 -23.911 7.926 1 53.54 ? C11 LMT 401 A 1 HETATM 35 C C12 LMT . . . D 2 59.604 -23.405 8.323 1 44.86 ? C12 LMT 401 A 1 # _model_server_stats.io_time_ms 148 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 530 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 35 #