data_4NQW # _model_server_result.job_id O4zV-1upo0GDlIEAw6dIGA _model_server_result.datetime_utc '2025-04-11 04:30:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nqw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":101}' # _entry.id 4NQW # _exptl.entry_id 4NQW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NQW _cell.length_a 57.39 _cell.length_b 57.39 _cell.length_c 150.87 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NQW _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 150 A CYS 133 1_555 A SG CYS 200 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A OE2 GLU 69 A GLU 52 1_555 E CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc2 A OE1 GLU 78 A GLU 61 1_555 F CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc3 A OD1 ASP 87 A ASP 70 1_555 H CD CD . A CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc4 A OD1 ASP 107 A ASP 90 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc5 A OD2 ASP 107 A ASP 90 1_555 L CD CD . B CD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc6 A SG CYS 111 A CYS 94 1_555 C CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc7 A SG CYS 111 A CYS 94 1_555 D CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc8 E CD CD . A CD 203 1_555 M O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc9 E CD CD . A CD 203 1_555 M O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc10 E CD CD . A CD 203 1_555 B NE2 HIS 69 B HIS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc11 H CD CD . A CD 206 1_555 M O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc12 B OD2 ASP 23 B ASP 23 1_555 L CD CD . B CD 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc13 B OD2 ASP 76 B ASP 76 1_555 K CD CD . B CD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc14 B OD1 ASP 76 B ASP 76 1_555 K CD CD . B CD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc15 K CD CD . B CD 101 1_555 N O HOH . B HOH 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4NQW _atom_sites.fract_transf_matrix[1][1] 0.017425 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006628 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CD A 1 201 1 CD CD . D 3 CD A 1 202 2 CD CD . E 3 CD A 1 203 3 CD CD . F 3 CD A 1 204 5 CD CD . G 3 CD A 1 205 7 CD CD . H 3 CD A 1 206 8 CD CD . I 3 CD A 1 207 9 CD CD . J 3 CD A 1 208 10 CD CD . K 3 CD B 1 101 4 CD CD . L 3 CD B 1 102 6 CD CD . M 4 HOH A 1 301 1 HOH HOH . M 4 HOH A 2 302 2 HOH HOH . M 4 HOH A 3 303 3 HOH HOH . M 4 HOH A 4 304 5 HOH HOH . M 4 HOH A 5 305 6 HOH HOH . M 4 HOH A 6 306 7 HOH HOH . M 4 HOH A 7 307 8 HOH HOH . M 4 HOH A 8 308 9 HOH HOH . M 4 HOH A 9 309 11 HOH HOH . M 4 HOH A 10 310 12 HOH HOH . M 4 HOH A 11 311 15 HOH HOH . M 4 HOH A 12 312 18 HOH HOH . M 4 HOH A 13 313 20 HOH HOH . M 4 HOH A 14 314 21 HOH HOH . M 4 HOH A 15 315 22 HOH HOH . M 4 HOH A 16 316 23 HOH HOH . M 4 HOH A 17 317 24 HOH HOH . M 4 HOH A 18 318 25 HOH HOH . M 4 HOH A 19 319 26 HOH HOH . M 4 HOH A 20 320 28 HOH HOH . M 4 HOH A 21 321 29 HOH HOH . M 4 HOH A 22 322 30 HOH HOH . M 4 HOH A 23 323 31 HOH HOH . M 4 HOH A 24 324 32 HOH HOH . M 4 HOH A 25 325 33 HOH HOH . M 4 HOH A 26 326 34 HOH HOH . M 4 HOH A 27 327 37 HOH HOH . M 4 HOH A 28 328 38 HOH HOH . M 4 HOH A 29 329 39 HOH HOH . M 4 HOH A 30 330 41 HOH HOH . M 4 HOH A 31 331 42 HOH HOH . M 4 HOH A 32 332 43 HOH HOH . M 4 HOH A 33 333 44 HOH HOH . M 4 HOH A 34 334 45 HOH HOH . M 4 HOH A 35 335 47 HOH HOH . M 4 HOH A 36 336 49 HOH HOH . M 4 HOH A 37 337 50 HOH HOH . M 4 HOH A 38 338 51 HOH HOH . M 4 HOH A 39 339 52 HOH HOH . M 4 HOH A 40 340 53 HOH HOH . M 4 HOH A 41 341 54 HOH HOH . M 4 HOH A 42 342 55 HOH HOH . M 4 HOH A 43 343 56 HOH HOH . M 4 HOH A 44 344 57 HOH HOH . M 4 HOH A 45 345 58 HOH HOH . M 4 HOH A 46 346 59 HOH HOH . M 4 HOH A 47 347 60 HOH HOH . M 4 HOH A 48 348 61 HOH HOH . M 4 HOH A 49 349 62 HOH HOH . M 4 HOH A 50 350 64 HOH HOH . M 4 HOH A 51 351 65 HOH HOH . M 4 HOH A 52 352 66 HOH HOH . M 4 HOH A 53 353 68 HOH HOH . M 4 HOH A 54 354 69 HOH HOH . M 4 HOH A 55 355 70 HOH HOH . M 4 HOH A 56 356 71 HOH HOH . M 4 HOH A 57 357 72 HOH HOH . M 4 HOH A 58 358 73 HOH HOH . M 4 HOH A 59 359 74 HOH HOH . M 4 HOH A 60 360 75 HOH HOH . M 4 HOH A 61 361 78 HOH HOH . M 4 HOH A 62 362 79 HOH HOH . M 4 HOH A 63 363 80 HOH HOH . M 4 HOH A 64 364 82 HOH HOH . M 4 HOH A 65 365 83 HOH HOH . M 4 HOH A 66 366 84 HOH HOH . M 4 HOH A 67 367 85 HOH HOH . M 4 HOH A 68 368 86 HOH HOH . M 4 HOH A 69 369 87 HOH HOH . M 4 HOH A 70 370 88 HOH HOH . M 4 HOH A 71 371 89 HOH HOH . N 4 HOH B 1 201 4 HOH HOH . N 4 HOH B 2 202 10 HOH HOH . N 4 HOH B 3 203 13 HOH HOH . N 4 HOH B 4 204 14 HOH HOH . N 4 HOH B 5 205 16 HOH HOH . N 4 HOH B 6 206 17 HOH HOH . N 4 HOH B 7 207 19 HOH HOH . N 4 HOH B 8 208 27 HOH HOH . N 4 HOH B 9 209 35 HOH HOH . N 4 HOH B 10 210 36 HOH HOH . N 4 HOH B 11 211 40 HOH HOH . N 4 HOH B 12 212 46 HOH HOH . N 4 HOH B 13 213 48 HOH HOH . N 4 HOH B 14 214 63 HOH HOH . N 4 HOH B 15 215 67 HOH HOH . N 4 HOH B 16 216 76 HOH HOH . N 4 HOH B 17 217 77 HOH HOH . N 4 HOH B 18 218 81 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.235 _atom_site.Cartn_y 21.206 _atom_site.Cartn_z 21.282 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #