data_4NR2 # _model_server_result.job_id oKkccK9uCXJO3O2z3kZzFA _model_server_result.datetime_utc '2024-11-29 00:49:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nr2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":502}' # _entry.id 4NR2 # _exptl.entry_id 4NR2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NR2 _cell.length_a 55.26 _cell.length_b 63.75 _cell.length_c 144.74 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NR2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L,M,S,T 1 1 C,D,N,U,V 2 1 E,F,O,P,W,X 3 1 G,H,Q,R,Y,Z 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 54 n n C1 C2 EDO sing 55 n n C1 H11 EDO sing 56 n n C1 H12 EDO sing 57 n n O1 HO1 EDO sing 58 n n C2 O2 EDO sing 59 n n C2 H21 EDO sing 60 n n C2 H22 EDO sing 61 n n O2 HO2 EDO sing 62 n n # _atom_sites.entry_id 4NR2 _atom_sites.fract_transf_matrix[1][1] 0.018096 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006909 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 EDO A 1 501 5 EDO EDO . J 2 EDO A 1 502 6 EDO EDO . K 2 EDO A 1 503 7 EDO EDO . L 2 EDO A 1 504 8 EDO EDO . M 2 EDO B 1 501 10 EDO EDO . N 2 EDO C 1 501 1 EDO EDO . O 2 EDO E 1 501 9 EDO EDO . P 2 EDO F 1 501 3 EDO EDO . Q 2 EDO H 1 501 2 EDO EDO . R 2 EDO H 1 502 4 EDO EDO . S 3 HOH A 1 601 5 HOH HOH . S 3 HOH A 2 602 8 HOH HOH . S 3 HOH A 3 603 16 HOH HOH . S 3 HOH A 4 604 19 HOH HOH . S 3 HOH A 5 605 41 HOH HOH . S 3 HOH A 6 606 45 HOH HOH . S 3 HOH A 7 607 48 HOH HOH . S 3 HOH A 8 608 56 HOH HOH . S 3 HOH A 9 609 57 HOH HOH . S 3 HOH A 10 610 58 HOH HOH . S 3 HOH A 11 611 61 HOH HOH . S 3 HOH A 12 612 62 HOH HOH . S 3 HOH A 13 613 64 HOH HOH . S 3 HOH A 14 614 70 HOH HOH . S 3 HOH A 15 615 77 HOH HOH . S 3 HOH A 16 616 84 HOH HOH . S 3 HOH A 17 617 90 HOH HOH . S 3 HOH A 18 618 97 HOH HOH . S 3 HOH A 19 619 103 HOH HOH . S 3 HOH A 20 620 108 HOH HOH . S 3 HOH A 21 621 112 HOH HOH . S 3 HOH A 22 622 113 HOH HOH . S 3 HOH A 23 623 114 HOH HOH . S 3 HOH A 24 624 126 HOH HOH . S 3 HOH A 25 625 130 HOH HOH . S 3 HOH A 26 626 131 HOH HOH . S 3 HOH A 27 627 143 HOH HOH . S 3 HOH A 28 628 144 HOH HOH . S 3 HOH A 29 629 150 HOH HOH . S 3 HOH A 30 630 153 HOH HOH . S 3 HOH A 31 631 154 HOH HOH . S 3 HOH A 32 632 156 HOH HOH . S 3 HOH A 33 633 202 HOH HOH . S 3 HOH A 34 634 205 HOH HOH . S 3 HOH A 35 635 206 HOH HOH . S 3 HOH A 36 636 209 HOH HOH . S 3 HOH A 37 637 210 HOH HOH . S 3 HOH A 38 638 211 HOH HOH . S 3 HOH A 39 639 212 HOH HOH . S 3 HOH A 40 640 231 HOH HOH . S 3 HOH A 41 641 254 HOH HOH . S 3 HOH A 42 642 13 HOH HOH . T 3 HOH B 1 601 14 HOH HOH . T 3 HOH B 2 602 26 HOH HOH . T 3 HOH B 3 603 31 HOH HOH . T 3 HOH B 4 604 33 HOH HOH . T 3 HOH B 5 605 65 HOH HOH . T 3 HOH B 6 606 66 HOH HOH . T 3 HOH B 7 607 67 HOH HOH . T 3 HOH B 8 608 85 HOH HOH . T 3 HOH B 9 609 87 HOH HOH . T 3 HOH B 10 610 99 HOH HOH . T 3 HOH B 11 611 111 HOH HOH . T 3 HOH B 12 612 125 HOH HOH . T 3 HOH B 13 613 127 HOH HOH . T 3 HOH B 14 614 128 HOH HOH . T 3 HOH B 15 615 138 HOH HOH . T 3 HOH B 16 616 139 HOH HOH . T 3 HOH B 17 617 146 HOH HOH . T 3 HOH B 18 618 152 HOH HOH . T 3 HOH B 19 619 155 HOH HOH . T 3 HOH B 20 620 158 HOH HOH . T 3 HOH B 21 621 160 HOH HOH . T 3 HOH B 22 622 163 HOH HOH . T 3 HOH B 23 623 164 HOH HOH . T 3 HOH B 24 624 203 HOH HOH . T 3 HOH B 25 625 213 HOH HOH . T 3 HOH B 26 626 214 HOH HOH . T 3 HOH B 27 627 215 HOH HOH . T 3 HOH B 28 628 217 HOH HOH . T 3 HOH B 29 629 218 HOH HOH . T 3 HOH B 30 630 219 HOH HOH . T 3 HOH B 31 631 246 HOH HOH . U 3 HOH C 1 601 27 HOH HOH . U 3 HOH C 2 602 28 HOH HOH . U 3 HOH C 3 603 29 HOH HOH . U 3 HOH C 4 604 50 HOH HOH . U 3 HOH C 5 605 75 HOH HOH . U 3 HOH C 6 606 105 HOH HOH . U 3 HOH C 7 607 119 HOH HOH . U 3 HOH C 8 608 141 HOH HOH . U 3 HOH C 9 609 157 HOH HOH . U 3 HOH C 10 610 165 HOH HOH . U 3 HOH C 11 611 167 HOH HOH . U 3 HOH C 12 612 168 HOH HOH . U 3 HOH C 13 613 169 HOH HOH . U 3 HOH C 14 614 170 HOH HOH . U 3 HOH C 15 615 171 HOH HOH . U 3 HOH C 16 616 175 HOH HOH . U 3 HOH C 17 617 221 HOH HOH . U 3 HOH C 18 618 222 HOH HOH . U 3 HOH C 19 619 223 HOH HOH . U 3 HOH C 20 620 224 HOH HOH . U 3 HOH C 21 621 226 HOH HOH . U 3 HOH C 22 622 227 HOH HOH . U 3 HOH C 23 623 253 HOH HOH . V 3 HOH D 1 501 1 HOH HOH . V 3 HOH D 2 502 30 HOH HOH . V 3 HOH D 3 503 51 HOH HOH . V 3 HOH D 4 504 53 HOH HOH . V 3 HOH D 5 505 72 HOH HOH . V 3 HOH D 6 506 78 HOH HOH . V 3 HOH D 7 507 79 HOH HOH . V 3 HOH D 8 508 82 HOH HOH . V 3 HOH D 9 509 93 HOH HOH . V 3 HOH D 10 510 115 HOH HOH . V 3 HOH D 11 511 149 HOH HOH . V 3 HOH D 12 512 159 HOH HOH . V 3 HOH D 13 513 166 HOH HOH . V 3 HOH D 14 514 172 HOH HOH . V 3 HOH D 15 515 173 HOH HOH . V 3 HOH D 16 516 174 HOH HOH . V 3 HOH D 17 517 176 HOH HOH . V 3 HOH D 18 518 177 HOH HOH . V 3 HOH D 19 519 178 HOH HOH . V 3 HOH D 20 520 179 HOH HOH . V 3 HOH D 21 521 180 HOH HOH . V 3 HOH D 22 522 204 HOH HOH . V 3 HOH D 23 523 216 HOH HOH . V 3 HOH D 24 524 228 HOH HOH . V 3 HOH D 25 525 229 HOH HOH . V 3 HOH D 26 526 250 HOH HOH . V 3 HOH D 27 527 252 HOH HOH . W 3 HOH E 1 601 6 HOH HOH . W 3 HOH E 2 602 21 HOH HOH . W 3 HOH E 3 603 37 HOH HOH . W 3 HOH E 4 604 38 HOH HOH . W 3 HOH E 5 605 39 HOH HOH . W 3 HOH E 6 606 55 HOH HOH . W 3 HOH E 7 607 68 HOH HOH . W 3 HOH E 8 608 69 HOH HOH . W 3 HOH E 9 609 73 HOH HOH . W 3 HOH E 10 610 80 HOH HOH . W 3 HOH E 11 611 91 HOH HOH . W 3 HOH E 12 612 96 HOH HOH . W 3 HOH E 13 613 110 HOH HOH . W 3 HOH E 14 614 116 HOH HOH . W 3 HOH E 15 615 145 HOH HOH . W 3 HOH E 16 616 151 HOH HOH . W 3 HOH E 17 617 181 HOH HOH . W 3 HOH E 18 618 199 HOH HOH . W 3 HOH E 19 619 207 HOH HOH . W 3 HOH E 20 620 247 HOH HOH . W 3 HOH E 21 621 248 HOH HOH . X 3 HOH F 1 601 18 HOH HOH . X 3 HOH F 2 602 23 HOH HOH . X 3 HOH F 3 603 25 HOH HOH . X 3 HOH F 4 604 32 HOH HOH . X 3 HOH F 5 605 34 HOH HOH . X 3 HOH F 6 606 40 HOH HOH . X 3 HOH F 7 607 43 HOH HOH . X 3 HOH F 8 608 49 HOH HOH . X 3 HOH F 9 609 54 HOH HOH . X 3 HOH F 10 610 81 HOH HOH . X 3 HOH F 11 611 104 HOH HOH . X 3 HOH F 12 612 109 HOH HOH . X 3 HOH F 13 613 129 HOH HOH . X 3 HOH F 14 614 182 HOH HOH . X 3 HOH F 15 615 183 HOH HOH . X 3 HOH F 16 616 186 HOH HOH . X 3 HOH F 17 617 189 HOH HOH . X 3 HOH F 18 618 201 HOH HOH . X 3 HOH F 19 619 230 HOH HOH . X 3 HOH F 20 620 237 HOH HOH . X 3 HOH F 21 621 238 HOH HOH . X 3 HOH F 22 622 239 HOH HOH . X 3 HOH F 23 623 240 HOH HOH . X 3 HOH F 24 624 249 HOH HOH . Y 3 HOH G 1 501 220 HOH HOH . Y 3 HOH G 2 502 7 HOH HOH . Y 3 HOH G 3 503 24 HOH HOH . Y 3 HOH G 4 504 35 HOH HOH . Y 3 HOH G 5 505 36 HOH HOH . Y 3 HOH G 6 506 44 HOH HOH . Y 3 HOH G 7 507 47 HOH HOH . Y 3 HOH G 8 508 52 HOH HOH . Y 3 HOH G 9 509 59 HOH HOH . Y 3 HOH G 10 510 83 HOH HOH . Y 3 HOH G 11 511 86 HOH HOH . Y 3 HOH G 12 512 88 HOH HOH . Y 3 HOH G 13 513 98 HOH HOH . Y 3 HOH G 14 514 106 HOH HOH . Y 3 HOH G 15 515 118 HOH HOH . Y 3 HOH G 16 516 122 HOH HOH . Y 3 HOH G 17 517 124 HOH HOH . Y 3 HOH G 18 518 184 HOH HOH . Y 3 HOH G 19 519 185 HOH HOH . Y 3 HOH G 20 520 187 HOH HOH . Y 3 HOH G 21 521 188 HOH HOH . Y 3 HOH G 22 522 190 HOH HOH . Y 3 HOH G 23 523 192 HOH HOH . Y 3 HOH G 24 524 193 HOH HOH . Y 3 HOH G 25 525 194 HOH HOH . Y 3 HOH G 26 526 197 HOH HOH . Y 3 HOH G 27 527 241 HOH HOH . Y 3 HOH G 28 528 242 HOH HOH . Y 3 HOH G 29 529 243 HOH HOH . Y 3 HOH G 30 530 244 HOH HOH . Z 3 HOH H 1 601 10 HOH HOH . Z 3 HOH H 2 602 17 HOH HOH . Z 3 HOH H 3 603 20 HOH HOH . Z 3 HOH H 4 604 22 HOH HOH . Z 3 HOH H 5 605 42 HOH HOH . Z 3 HOH H 6 606 76 HOH HOH . Z 3 HOH H 7 607 92 HOH HOH . Z 3 HOH H 8 608 120 HOH HOH . Z 3 HOH H 9 609 132 HOH HOH . Z 3 HOH H 10 610 133 HOH HOH . Z 3 HOH H 11 611 134 HOH HOH . Z 3 HOH H 12 612 135 HOH HOH . Z 3 HOH H 13 613 140 HOH HOH . Z 3 HOH H 14 614 195 HOH HOH . Z 3 HOH H 15 615 196 HOH HOH . Z 3 HOH H 16 616 198 HOH HOH . Z 3 HOH H 17 617 200 HOH HOH . Z 3 HOH H 18 618 208 HOH HOH . Z 3 HOH H 19 619 232 HOH HOH . Z 3 HOH H 20 620 233 HOH HOH . Z 3 HOH H 21 621 234 HOH HOH . Z 3 HOH H 22 622 235 HOH HOH . Z 3 HOH H 23 623 236 HOH HOH . Z 3 HOH H 24 624 245 HOH HOH . Z 3 HOH H 25 625 251 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 2 59.371 30.295 76.203 1 74.62 ? C1 EDO 502 A 1 HETATM 2 O O1 EDO . . . J 2 60.224 31.438 76.068 1 77.08 ? O1 EDO 502 A 1 HETATM 3 C C2 EDO . . . J 2 58.088 30.514 75.406 1 68.96 ? C2 EDO 502 A 1 HETATM 4 O O2 EDO . . . J 2 57.677 31.893 75.36 1 71.72 ? O2 EDO 502 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 447 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #