data_4NR2
#
_model_server_result.job_id            gYh-qqzg3jJTL5ohfwmIkw 
_model_server_result.datetime_utc      '2024-11-14 22:39:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nr2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":502}' 
#
_entry.id    4NR2 
#
_exptl.entry_id    4NR2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NR2 
_cell.length_a            55.26 
_cell.length_b            63.75 
_cell.length_c            144.74 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NR2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,L,M,S,T 1 1 
C,D,N,U,V 2 1 
E,F,O,P,W,X 3 1 
G,H,Q,R,Y,Z 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 54 n n 
C1 C2 EDO sing 55 n n 
C1 H11 EDO sing 56 n n 
C1 H12 EDO sing 57 n n 
O1 HO1 EDO sing 58 n n 
C2 O2 EDO sing 59 n n 
C2 H21 EDO sing 60 n n 
C2 H22 EDO sing 61 n n 
O2 HO2 EDO sing 62 n n 
#
_atom_sites.entry_id                     4NR2 
_atom_sites.fract_transf_matrix[1][1]    0.018096 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015686 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006909 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 EDO A 1 501 5 EDO EDO . 
J 2 EDO A 1 502 6 EDO EDO . 
K 2 EDO A 1 503 7 EDO EDO . 
L 2 EDO A 1 504 8 EDO EDO . 
M 2 EDO B 1 501 10 EDO EDO . 
N 2 EDO C 1 501 1 EDO EDO . 
O 2 EDO E 1 501 9 EDO EDO . 
P 2 EDO F 1 501 3 EDO EDO . 
Q 2 EDO H 1 501 2 EDO EDO . 
R 2 EDO H 1 502 4 EDO EDO . 
S 3 HOH A 1 601 5 HOH HOH . 
S 3 HOH A 2 602 8 HOH HOH . 
S 3 HOH A 3 603 16 HOH HOH . 
S 3 HOH A 4 604 19 HOH HOH . 
S 3 HOH A 5 605 41 HOH HOH . 
S 3 HOH A 6 606 45 HOH HOH . 
S 3 HOH A 7 607 48 HOH HOH . 
S 3 HOH A 8 608 56 HOH HOH . 
S 3 HOH A 9 609 57 HOH HOH . 
S 3 HOH A 10 610 58 HOH HOH . 
S 3 HOH A 11 611 61 HOH HOH . 
S 3 HOH A 12 612 62 HOH HOH . 
S 3 HOH A 13 613 64 HOH HOH . 
S 3 HOH A 14 614 70 HOH HOH . 
S 3 HOH A 15 615 77 HOH HOH . 
S 3 HOH A 16 616 84 HOH HOH . 
S 3 HOH A 17 617 90 HOH HOH . 
S 3 HOH A 18 618 97 HOH HOH . 
S 3 HOH A 19 619 103 HOH HOH . 
S 3 HOH A 20 620 108 HOH HOH . 
S 3 HOH A 21 621 112 HOH HOH . 
S 3 HOH A 22 622 113 HOH HOH . 
S 3 HOH A 23 623 114 HOH HOH . 
S 3 HOH A 24 624 126 HOH HOH . 
S 3 HOH A 25 625 130 HOH HOH . 
S 3 HOH A 26 626 131 HOH HOH . 
S 3 HOH A 27 627 143 HOH HOH . 
S 3 HOH A 28 628 144 HOH HOH . 
S 3 HOH A 29 629 150 HOH HOH . 
S 3 HOH A 30 630 153 HOH HOH . 
S 3 HOH A 31 631 154 HOH HOH . 
S 3 HOH A 32 632 156 HOH HOH . 
S 3 HOH A 33 633 202 HOH HOH . 
S 3 HOH A 34 634 205 HOH HOH . 
S 3 HOH A 35 635 206 HOH HOH . 
S 3 HOH A 36 636 209 HOH HOH . 
S 3 HOH A 37 637 210 HOH HOH . 
S 3 HOH A 38 638 211 HOH HOH . 
S 3 HOH A 39 639 212 HOH HOH . 
S 3 HOH A 40 640 231 HOH HOH . 
S 3 HOH A 41 641 254 HOH HOH . 
S 3 HOH A 42 642 13 HOH HOH . 
T 3 HOH B 1 601 14 HOH HOH . 
T 3 HOH B 2 602 26 HOH HOH . 
T 3 HOH B 3 603 31 HOH HOH . 
T 3 HOH B 4 604 33 HOH HOH . 
T 3 HOH B 5 605 65 HOH HOH . 
T 3 HOH B 6 606 66 HOH HOH . 
T 3 HOH B 7 607 67 HOH HOH . 
T 3 HOH B 8 608 85 HOH HOH . 
T 3 HOH B 9 609 87 HOH HOH . 
T 3 HOH B 10 610 99 HOH HOH . 
T 3 HOH B 11 611 111 HOH HOH . 
T 3 HOH B 12 612 125 HOH HOH . 
T 3 HOH B 13 613 127 HOH HOH . 
T 3 HOH B 14 614 128 HOH HOH . 
T 3 HOH B 15 615 138 HOH HOH . 
T 3 HOH B 16 616 139 HOH HOH . 
T 3 HOH B 17 617 146 HOH HOH . 
T 3 HOH B 18 618 152 HOH HOH . 
T 3 HOH B 19 619 155 HOH HOH . 
T 3 HOH B 20 620 158 HOH HOH . 
T 3 HOH B 21 621 160 HOH HOH . 
T 3 HOH B 22 622 163 HOH HOH . 
T 3 HOH B 23 623 164 HOH HOH . 
T 3 HOH B 24 624 203 HOH HOH . 
T 3 HOH B 25 625 213 HOH HOH . 
T 3 HOH B 26 626 214 HOH HOH . 
T 3 HOH B 27 627 215 HOH HOH . 
T 3 HOH B 28 628 217 HOH HOH . 
T 3 HOH B 29 629 218 HOH HOH . 
T 3 HOH B 30 630 219 HOH HOH . 
T 3 HOH B 31 631 246 HOH HOH . 
U 3 HOH C 1 601 27 HOH HOH . 
U 3 HOH C 2 602 28 HOH HOH . 
U 3 HOH C 3 603 29 HOH HOH . 
U 3 HOH C 4 604 50 HOH HOH . 
U 3 HOH C 5 605 75 HOH HOH . 
U 3 HOH C 6 606 105 HOH HOH . 
U 3 HOH C 7 607 119 HOH HOH . 
U 3 HOH C 8 608 141 HOH HOH . 
U 3 HOH C 9 609 157 HOH HOH . 
U 3 HOH C 10 610 165 HOH HOH . 
U 3 HOH C 11 611 167 HOH HOH . 
U 3 HOH C 12 612 168 HOH HOH . 
U 3 HOH C 13 613 169 HOH HOH . 
U 3 HOH C 14 614 170 HOH HOH . 
U 3 HOH C 15 615 171 HOH HOH . 
U 3 HOH C 16 616 175 HOH HOH . 
U 3 HOH C 17 617 221 HOH HOH . 
U 3 HOH C 18 618 222 HOH HOH . 
U 3 HOH C 19 619 223 HOH HOH . 
U 3 HOH C 20 620 224 HOH HOH . 
U 3 HOH C 21 621 226 HOH HOH . 
U 3 HOH C 22 622 227 HOH HOH . 
U 3 HOH C 23 623 253 HOH HOH . 
V 3 HOH D 1 501 1 HOH HOH . 
V 3 HOH D 2 502 30 HOH HOH . 
V 3 HOH D 3 503 51 HOH HOH . 
V 3 HOH D 4 504 53 HOH HOH . 
V 3 HOH D 5 505 72 HOH HOH . 
V 3 HOH D 6 506 78 HOH HOH . 
V 3 HOH D 7 507 79 HOH HOH . 
V 3 HOH D 8 508 82 HOH HOH . 
V 3 HOH D 9 509 93 HOH HOH . 
V 3 HOH D 10 510 115 HOH HOH . 
V 3 HOH D 11 511 149 HOH HOH . 
V 3 HOH D 12 512 159 HOH HOH . 
V 3 HOH D 13 513 166 HOH HOH . 
V 3 HOH D 14 514 172 HOH HOH . 
V 3 HOH D 15 515 173 HOH HOH . 
V 3 HOH D 16 516 174 HOH HOH . 
V 3 HOH D 17 517 176 HOH HOH . 
V 3 HOH D 18 518 177 HOH HOH . 
V 3 HOH D 19 519 178 HOH HOH . 
V 3 HOH D 20 520 179 HOH HOH . 
V 3 HOH D 21 521 180 HOH HOH . 
V 3 HOH D 22 522 204 HOH HOH . 
V 3 HOH D 23 523 216 HOH HOH . 
V 3 HOH D 24 524 228 HOH HOH . 
V 3 HOH D 25 525 229 HOH HOH . 
V 3 HOH D 26 526 250 HOH HOH . 
V 3 HOH D 27 527 252 HOH HOH . 
W 3 HOH E 1 601 6 HOH HOH . 
W 3 HOH E 2 602 21 HOH HOH . 
W 3 HOH E 3 603 37 HOH HOH . 
W 3 HOH E 4 604 38 HOH HOH . 
W 3 HOH E 5 605 39 HOH HOH . 
W 3 HOH E 6 606 55 HOH HOH . 
W 3 HOH E 7 607 68 HOH HOH . 
W 3 HOH E 8 608 69 HOH HOH . 
W 3 HOH E 9 609 73 HOH HOH . 
W 3 HOH E 10 610 80 HOH HOH . 
W 3 HOH E 11 611 91 HOH HOH . 
W 3 HOH E 12 612 96 HOH HOH . 
W 3 HOH E 13 613 110 HOH HOH . 
W 3 HOH E 14 614 116 HOH HOH . 
W 3 HOH E 15 615 145 HOH HOH . 
W 3 HOH E 16 616 151 HOH HOH . 
W 3 HOH E 17 617 181 HOH HOH . 
W 3 HOH E 18 618 199 HOH HOH . 
W 3 HOH E 19 619 207 HOH HOH . 
W 3 HOH E 20 620 247 HOH HOH . 
W 3 HOH E 21 621 248 HOH HOH . 
X 3 HOH F 1 601 18 HOH HOH . 
X 3 HOH F 2 602 23 HOH HOH . 
X 3 HOH F 3 603 25 HOH HOH . 
X 3 HOH F 4 604 32 HOH HOH . 
X 3 HOH F 5 605 34 HOH HOH . 
X 3 HOH F 6 606 40 HOH HOH . 
X 3 HOH F 7 607 43 HOH HOH . 
X 3 HOH F 8 608 49 HOH HOH . 
X 3 HOH F 9 609 54 HOH HOH . 
X 3 HOH F 10 610 81 HOH HOH . 
X 3 HOH F 11 611 104 HOH HOH . 
X 3 HOH F 12 612 109 HOH HOH . 
X 3 HOH F 13 613 129 HOH HOH . 
X 3 HOH F 14 614 182 HOH HOH . 
X 3 HOH F 15 615 183 HOH HOH . 
X 3 HOH F 16 616 186 HOH HOH . 
X 3 HOH F 17 617 189 HOH HOH . 
X 3 HOH F 18 618 201 HOH HOH . 
X 3 HOH F 19 619 230 HOH HOH . 
X 3 HOH F 20 620 237 HOH HOH . 
X 3 HOH F 21 621 238 HOH HOH . 
X 3 HOH F 22 622 239 HOH HOH . 
X 3 HOH F 23 623 240 HOH HOH . 
X 3 HOH F 24 624 249 HOH HOH . 
Y 3 HOH G 1 501 220 HOH HOH . 
Y 3 HOH G 2 502 7 HOH HOH . 
Y 3 HOH G 3 503 24 HOH HOH . 
Y 3 HOH G 4 504 35 HOH HOH . 
Y 3 HOH G 5 505 36 HOH HOH . 
Y 3 HOH G 6 506 44 HOH HOH . 
Y 3 HOH G 7 507 47 HOH HOH . 
Y 3 HOH G 8 508 52 HOH HOH . 
Y 3 HOH G 9 509 59 HOH HOH . 
Y 3 HOH G 10 510 83 HOH HOH . 
Y 3 HOH G 11 511 86 HOH HOH . 
Y 3 HOH G 12 512 88 HOH HOH . 
Y 3 HOH G 13 513 98 HOH HOH . 
Y 3 HOH G 14 514 106 HOH HOH . 
Y 3 HOH G 15 515 118 HOH HOH . 
Y 3 HOH G 16 516 122 HOH HOH . 
Y 3 HOH G 17 517 124 HOH HOH . 
Y 3 HOH G 18 518 184 HOH HOH . 
Y 3 HOH G 19 519 185 HOH HOH . 
Y 3 HOH G 20 520 187 HOH HOH . 
Y 3 HOH G 21 521 188 HOH HOH . 
Y 3 HOH G 22 522 190 HOH HOH . 
Y 3 HOH G 23 523 192 HOH HOH . 
Y 3 HOH G 24 524 193 HOH HOH . 
Y 3 HOH G 25 525 194 HOH HOH . 
Y 3 HOH G 26 526 197 HOH HOH . 
Y 3 HOH G 27 527 241 HOH HOH . 
Y 3 HOH G 28 528 242 HOH HOH . 
Y 3 HOH G 29 529 243 HOH HOH . 
Y 3 HOH G 30 530 244 HOH HOH . 
Z 3 HOH H 1 601 10 HOH HOH . 
Z 3 HOH H 2 602 17 HOH HOH . 
Z 3 HOH H 3 603 20 HOH HOH . 
Z 3 HOH H 4 604 22 HOH HOH . 
Z 3 HOH H 5 605 42 HOH HOH . 
Z 3 HOH H 6 606 76 HOH HOH . 
Z 3 HOH H 7 607 92 HOH HOH . 
Z 3 HOH H 8 608 120 HOH HOH . 
Z 3 HOH H 9 609 132 HOH HOH . 
Z 3 HOH H 10 610 133 HOH HOH . 
Z 3 HOH H 11 611 134 HOH HOH . 
Z 3 HOH H 12 612 135 HOH HOH . 
Z 3 HOH H 13 613 140 HOH HOH . 
Z 3 HOH H 14 614 195 HOH HOH . 
Z 3 HOH H 15 615 196 HOH HOH . 
Z 3 HOH H 16 616 198 HOH HOH . 
Z 3 HOH H 17 617 200 HOH HOH . 
Z 3 HOH H 18 618 208 HOH HOH . 
Z 3 HOH H 19 619 232 HOH HOH . 
Z 3 HOH H 20 620 233 HOH HOH . 
Z 3 HOH H 21 621 234 HOH HOH . 
Z 3 HOH H 22 622 235 HOH HOH . 
Z 3 HOH H 23 623 236 HOH HOH . 
Z 3 HOH H 24 624 245 HOH HOH . 
Z 3 HOH H 25 625 251 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . R 2 49.63 29.537 30.561 1 39.12 ? C1 EDO 502 H 1 
HETATM 2 O O1 EDO . . . R 2 50.688 28.984 29.762 1 40.78 ? O1 EDO 502 H 1 
HETATM 3 C C2 EDO . . . R 2 50.138 30.086 31.893 1 45.15 ? C2 EDO 502 H 1 
HETATM 4 O O2 EDO . . . R 2 50.907 31.29 31.737 1 46.03 ? O2 EDO 502 H 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#