data_4NRI # _model_server_result.job_id mlXu7_1bPlhGDiFdIpTYNA _model_server_result.datetime_utc '2024-11-22 12:16:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4NRI # _exptl.entry_id 4NRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NRI _cell.length_a 43.612 _cell.length_b 78.187 _cell.length_c 92.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4NRI _atom_sites.fract_transf_matrix[1][1] 0.022929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 201 1 GOL GOL . D 4 HOH A 1 301 1 HOH HOH . D 4 HOH A 2 302 4 HOH HOH . D 4 HOH A 3 303 5 HOH HOH . D 4 HOH A 4 304 6 HOH HOH . D 4 HOH A 5 305 7 HOH HOH . D 4 HOH A 6 306 8 HOH HOH . D 4 HOH A 7 307 9 HOH HOH . D 4 HOH A 8 308 10 HOH HOH . D 4 HOH A 9 309 11 HOH HOH . D 4 HOH A 10 310 12 HOH HOH . D 4 HOH A 11 311 13 HOH HOH . D 4 HOH A 12 312 14 HOH HOH . D 4 HOH A 13 313 17 HOH HOH . D 4 HOH A 14 314 19 HOH HOH . D 4 HOH A 15 315 20 HOH HOH . D 4 HOH A 16 316 21 HOH HOH . D 4 HOH A 17 317 22 HOH HOH . D 4 HOH A 18 318 25 HOH HOH . D 4 HOH A 19 319 26 HOH HOH . D 4 HOH A 20 320 27 HOH HOH . D 4 HOH A 21 321 28 HOH HOH . D 4 HOH A 22 322 33 HOH HOH . D 4 HOH A 23 323 34 HOH HOH . D 4 HOH A 24 324 35 HOH HOH . D 4 HOH A 25 325 36 HOH HOH . D 4 HOH A 26 326 37 HOH HOH . D 4 HOH A 27 327 38 HOH HOH . D 4 HOH A 28 328 40 HOH HOH . D 4 HOH A 29 329 42 HOH HOH . D 4 HOH A 30 330 43 HOH HOH . D 4 HOH A 31 331 45 HOH HOH . D 4 HOH A 32 332 46 HOH HOH . D 4 HOH A 33 333 47 HOH HOH . D 4 HOH A 34 334 48 HOH HOH . D 4 HOH A 35 335 49 HOH HOH . D 4 HOH A 36 336 54 HOH HOH . D 4 HOH A 37 337 56 HOH HOH . D 4 HOH A 38 338 58 HOH HOH . D 4 HOH A 39 339 60 HOH HOH . D 4 HOH A 40 340 61 HOH HOH . D 4 HOH A 41 341 62 HOH HOH . D 4 HOH A 42 342 63 HOH HOH . D 4 HOH A 43 343 64 HOH HOH . D 4 HOH A 44 344 65 HOH HOH . D 4 HOH A 45 345 66 HOH HOH . D 4 HOH A 46 346 67 HOH HOH . D 4 HOH A 47 347 70 HOH HOH . D 4 HOH A 48 348 71 HOH HOH . D 4 HOH A 49 349 72 HOH HOH . D 4 HOH A 50 350 73 HOH HOH . D 4 HOH A 51 351 74 HOH HOH . D 4 HOH A 52 352 75 HOH HOH . D 4 HOH A 53 353 76 HOH HOH . D 4 HOH A 54 354 78 HOH HOH . D 4 HOH A 55 355 79 HOH HOH . E 4 HOH B 1 201 2 HOH HOH . E 4 HOH B 2 202 3 HOH HOH . E 4 HOH B 3 203 15 HOH HOH . E 4 HOH B 4 204 16 HOH HOH . E 4 HOH B 5 205 18 HOH HOH . E 4 HOH B 6 206 23 HOH HOH . E 4 HOH B 7 207 24 HOH HOH . E 4 HOH B 8 208 29 HOH HOH . E 4 HOH B 9 209 30 HOH HOH . E 4 HOH B 10 210 31 HOH HOH . E 4 HOH B 11 211 32 HOH HOH . E 4 HOH B 12 212 39 HOH HOH . E 4 HOH B 13 213 41 HOH HOH . E 4 HOH B 14 214 44 HOH HOH . E 4 HOH B 15 215 50 HOH HOH . E 4 HOH B 16 216 51 HOH HOH . E 4 HOH B 17 217 52 HOH HOH . E 4 HOH B 18 218 53 HOH HOH . E 4 HOH B 19 219 55 HOH HOH . E 4 HOH B 20 220 57 HOH HOH . E 4 HOH B 21 221 59 HOH HOH . E 4 HOH B 22 222 68 HOH HOH . E 4 HOH B 23 223 69 HOH HOH . E 4 HOH B 24 224 77 HOH HOH . E 4 HOH B 25 225 80 HOH HOH . E 4 HOH B 26 226 81 HOH HOH . E 4 HOH B 27 227 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 26.702 14.365 9.186 1 42.87 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 3 26.992 15.602 9.737 1 39.7 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 3 25.365 14.326 8.534 1 39.93 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 3 25.526 14.134 7.173 1 45.48 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 3 24.547 13.206 9.088 1 39.1 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 3 23.778 13.614 10.167 1 32.82 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #