data_4NRV # _model_server_result.job_id PQp8n1AHfb_ZVz0r05A6YA _model_server_result.datetime_utc '2025-09-01 07:15:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nrv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2000}' # _entry.id 4NRV # _exptl.entry_id 4NRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4NRV _cell.length_a 132.76 _cell.length_b 132.76 _cell.length_c 50.594 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 4NRV _atom_sites.fract_transf_matrix[1][1] 0.007532 _atom_sites.fract_transf_matrix[1][2] 0.004349 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 2000 2000 TRS TRS . C 3 HOH A 1 2101 1 HOH HOH . C 3 HOH A 2 2102 2 HOH HOH . C 3 HOH A 3 2103 3 HOH HOH . C 3 HOH A 4 2104 4 HOH HOH . C 3 HOH A 5 2105 5 HOH HOH . C 3 HOH A 6 2106 6 HOH HOH . C 3 HOH A 7 2107 7 HOH HOH . C 3 HOH A 8 2108 8 HOH HOH . C 3 HOH A 9 2109 9 HOH HOH . C 3 HOH A 10 2110 10 HOH HOH . C 3 HOH A 11 2111 11 HOH HOH . C 3 HOH A 12 2112 12 HOH HOH . C 3 HOH A 13 2113 13 HOH HOH . C 3 HOH A 14 2114 14 HOH HOH . C 3 HOH A 15 2115 15 HOH HOH . C 3 HOH A 16 2116 16 HOH HOH . C 3 HOH A 17 2117 17 HOH HOH . C 3 HOH A 18 2118 18 HOH HOH . C 3 HOH A 19 2119 19 HOH HOH . C 3 HOH A 20 2120 20 HOH HOH . C 3 HOH A 21 2121 21 HOH HOH . C 3 HOH A 22 2122 22 HOH HOH . C 3 HOH A 23 2123 23 HOH HOH . C 3 HOH A 24 2124 24 HOH HOH . C 3 HOH A 25 2125 25 HOH HOH . C 3 HOH A 26 2126 26 HOH HOH . C 3 HOH A 27 2127 27 HOH HOH . C 3 HOH A 28 2128 28 HOH HOH . C 3 HOH A 29 2129 29 HOH HOH . C 3 HOH A 30 2130 30 HOH HOH . C 3 HOH A 31 2131 31 HOH HOH . C 3 HOH A 32 2132 32 HOH HOH . C 3 HOH A 33 2133 33 HOH HOH . C 3 HOH A 34 2134 34 HOH HOH . C 3 HOH A 35 2135 35 HOH HOH . C 3 HOH A 36 2136 36 HOH HOH . C 3 HOH A 37 2137 37 HOH HOH . C 3 HOH A 38 2138 38 HOH HOH . C 3 HOH A 39 2139 39 HOH HOH . C 3 HOH A 40 2140 40 HOH HOH . C 3 HOH A 41 2141 41 HOH HOH . C 3 HOH A 42 2142 42 HOH HOH . C 3 HOH A 43 2143 43 HOH HOH . C 3 HOH A 44 2144 44 HOH HOH . C 3 HOH A 45 2145 45 HOH HOH . C 3 HOH A 46 2146 46 HOH HOH . C 3 HOH A 47 2147 47 HOH HOH . C 3 HOH A 48 2148 48 HOH HOH . C 3 HOH A 49 2149 49 HOH HOH . C 3 HOH A 50 2150 50 HOH HOH . C 3 HOH A 51 2151 51 HOH HOH . C 3 HOH A 52 2152 52 HOH HOH . C 3 HOH A 53 2153 53 HOH HOH . C 3 HOH A 54 2154 54 HOH HOH . C 3 HOH A 55 2155 55 HOH HOH . C 3 HOH A 56 2156 56 HOH HOH . C 3 HOH A 57 2157 57 HOH HOH . C 3 HOH A 58 2158 58 HOH HOH . C 3 HOH A 59 2159 59 HOH HOH . C 3 HOH A 60 2160 60 HOH HOH . C 3 HOH A 61 2161 61 HOH HOH . C 3 HOH A 62 2162 62 HOH HOH . C 3 HOH A 63 2163 63 HOH HOH . C 3 HOH A 64 2164 64 HOH HOH . C 3 HOH A 65 2165 65 HOH HOH . C 3 HOH A 66 2166 66 HOH HOH . C 3 HOH A 67 2167 67 HOH HOH . C 3 HOH A 68 2168 68 HOH HOH . C 3 HOH A 69 2169 69 HOH HOH . C 3 HOH A 70 2170 70 HOH HOH . C 3 HOH A 71 2171 71 HOH HOH . C 3 HOH A 72 2172 72 HOH HOH . C 3 HOH A 73 2173 73 HOH HOH . C 3 HOH A 74 2174 74 HOH HOH . C 3 HOH A 75 2175 75 HOH HOH . C 3 HOH A 76 2176 76 HOH HOH . C 3 HOH A 77 2177 77 HOH HOH . C 3 HOH A 78 2178 78 HOH HOH . C 3 HOH A 79 2179 79 HOH HOH . C 3 HOH A 80 2180 80 HOH HOH . C 3 HOH A 81 2181 81 HOH HOH . C 3 HOH A 82 2182 82 HOH HOH . C 3 HOH A 83 2183 83 HOH HOH . C 3 HOH A 84 2184 84 HOH HOH . C 3 HOH A 85 2185 85 HOH HOH . C 3 HOH A 86 2186 86 HOH HOH . C 3 HOH A 87 2187 87 HOH HOH . C 3 HOH A 88 2188 88 HOH HOH . C 3 HOH A 89 2189 89 HOH HOH . C 3 HOH A 90 2190 90 HOH HOH . C 3 HOH A 91 2191 91 HOH HOH . C 3 HOH A 92 2192 92 HOH HOH . C 3 HOH A 93 2193 93 HOH HOH . C 3 HOH A 94 2194 94 HOH HOH . C 3 HOH A 95 2195 95 HOH HOH . C 3 HOH A 96 2196 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 27.878 11.422 9.398 1 34.76 ? C TRS 2000 A 1 HETATM 2 C C1 TRS . . . B 2 27.853 9.9 9.219 1 37.56 ? C1 TRS 2000 A 1 HETATM 3 C C2 TRS . . . B 2 27.901 12.104 8.002 1 41.49 ? C2 TRS 2000 A 1 HETATM 4 C C3 TRS . . . B 2 29.122 11.83 10.177 1 41.17 ? C3 TRS 2000 A 1 HETATM 5 N N TRS . . . B 2 26.692 11.843 10.125 1 19.52 ? N TRS 2000 A 1 HETATM 6 O O1 TRS . . . B 2 27.549 9.275 10.461 1 39.53 ? O1 TRS 2000 A 1 HETATM 7 O O2 TRS . . . B 2 28.068 13.517 8.159 1 40.68 ? O2 TRS 2000 A 1 HETATM 8 O O3 TRS . . . B 2 29.168 11.151 11.382 1 45.87 ? O3 TRS 2000 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 605 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #