data_4NS0
#
_model_server_result.job_id            0HIRS3Dlz4VbKfbSZLbh4g 
_model_server_result.datetime_utc      '2025-03-06 10:15:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ns0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    4NS0 
#
_exptl.entry_id    4NS0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              746.566 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NS0 
_cell.length_a            37.97 
_cell.length_b            38.91 
_cell.length_c            88.72 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NS0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C25 H49 O19 P3' 
_chem_comp.formula_weight    746.566 
_chem_comp.id                PIO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'dioctanoyl l-alpha-phosphatidyl-d-myo-inositol 4,5-diphosphate' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PIO sing 260 n n 
C1 C2 PIO sing 261 n n 
C1 C6 PIO sing 262 n n 
C1 H1 PIO sing 263 n n 
O1 P1 PIO sing 264 n n 
P1 O11 PIO sing 265 n n 
O11 H11 PIO sing 266 n n 
P1 O12 PIO doub 267 n n 
P1 O13 PIO sing 268 n n 
C2 O2 PIO sing 269 n n 
C2 C3 PIO sing 270 n n 
C2 H2 PIO sing 271 n n 
O2 HO2 PIO sing 272 n n 
C3 O3 PIO sing 273 n n 
C3 C4 PIO sing 274 n n 
C3 H3 PIO sing 275 n n 
O3 HO3 PIO sing 276 n n 
C4 O4 PIO sing 277 n n 
C4 C5 PIO sing 278 n n 
C4 H4 PIO sing 279 n n 
O4 P4 PIO sing 280 n n 
P4 O41 PIO sing 281 n n 
O41 H41 PIO sing 282 n n 
P4 O42 PIO doub 283 n n 
P4 O43 PIO sing 284 n n 
O43 H43 PIO sing 285 n n 
C5 O5 PIO sing 286 n n 
C5 C6 PIO sing 287 n n 
C5 H5 PIO sing 288 n n 
O5 P5 PIO sing 289 n n 
P5 O51 PIO sing 290 n n 
O51 H51 PIO sing 291 n n 
P5 O52 PIO sing 292 n n 
O52 H52 PIO sing 293 n n 
P5 O53 PIO doub 294 n n 
C6 O6 PIO sing 295 n n 
C6 H6 PIO sing 296 n n 
O6 HO6 PIO sing 297 n n 
O13 C1C PIO sing 298 n n 
C1A O1A PIO doub 299 n n 
C1A C2A PIO sing 300 n n 
C1A O2C PIO sing 301 n n 
C1B O1B PIO doub 302 n n 
C1B C2B PIO sing 303 n n 
C1B O3C PIO sing 304 n n 
C1C C2C PIO sing 305 n n 
C1C H1C PIO sing 306 n n 
C1C H1CA PIO sing 307 n n 
C2A C3A PIO sing 308 n n 
C2A H2A PIO sing 309 n n 
C2A H2AA PIO sing 310 n n 
C2B C3B PIO sing 311 n n 
C2B H2B PIO sing 312 n n 
C2B H2BA PIO sing 313 n n 
C2C O2C PIO sing 314 n n 
C2C C3C PIO sing 315 n n 
C2C H2C PIO sing 316 n n 
C3A C4A PIO sing 317 n n 
C3A H3A PIO sing 318 n n 
C3A H3AA PIO sing 319 n n 
C3B C4B PIO sing 320 n n 
C3B H3B PIO sing 321 n n 
C3B H3BA PIO sing 322 n n 
C3C O3C PIO sing 323 n n 
C3C H3C PIO sing 324 n n 
C3C H3CA PIO sing 325 n n 
C4A C5A PIO sing 326 n n 
C4A H4A PIO sing 327 n n 
C4A H4AA PIO sing 328 n n 
C4B C5B PIO sing 329 n n 
C4B H4B PIO sing 330 n n 
C4B H4BA PIO sing 331 n n 
C5A C6A PIO sing 332 n n 
C5A H5A PIO sing 333 n n 
C5A H5AA PIO sing 334 n n 
C5B C6B PIO sing 335 n n 
C5B H5B PIO sing 336 n n 
C5B H5BA PIO sing 337 n n 
C6A C7A PIO sing 338 n n 
C6A H6A PIO sing 339 n n 
C6A H6AA PIO sing 340 n n 
C6B C7B PIO sing 341 n n 
C6B H6B PIO sing 342 n n 
C6B H6BA PIO sing 343 n n 
C7A C8A PIO sing 344 n n 
C7A H7A PIO sing 345 n n 
C7A H7AA PIO sing 346 n n 
C7B C8B PIO sing 347 n n 
C7B H7B PIO sing 348 n n 
C7B H7BA PIO sing 349 n n 
C8A H8A PIO sing 350 n n 
C8A H8AA PIO sing 351 n n 
C8A H8AB PIO sing 352 n n 
C8B H8B PIO sing 353 n n 
C8B H8BA PIO sing 354 n n 
C8B H8BB PIO sing 355 n n 
#
_atom_sites.entry_id                     4NS0 
_atom_sites.fract_transf_matrix[1][1]    0.026337 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0257 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011271 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PIO A 1 601 601 PIO PIO . 
C 3 SO4 A 1 602 602 SO4 SO4 . 
D 4 HOH A 1 701 701 HOH HOH . 
D 4 HOH A 2 702 702 HOH HOH . 
D 4 HOH A 3 703 703 HOH HOH . 
D 4 HOH A 4 704 704 HOH HOH . 
D 4 HOH A 5 705 705 HOH HOH . 
D 4 HOH A 6 706 706 HOH HOH . 
D 4 HOH A 7 707 707 HOH HOH . 
D 4 HOH A 8 708 708 HOH HOH . 
D 4 HOH A 9 709 709 HOH HOH . 
D 4 HOH A 10 710 710 HOH HOH . 
D 4 HOH A 11 711 711 HOH HOH . 
D 4 HOH A 12 712 712 HOH HOH . 
D 4 HOH A 13 713 713 HOH HOH . 
D 4 HOH A 14 714 714 HOH HOH . 
D 4 HOH A 15 715 715 HOH HOH . 
D 4 HOH A 16 716 716 HOH HOH . 
D 4 HOH A 17 717 717 HOH HOH . 
D 4 HOH A 18 718 718 HOH HOH . 
D 4 HOH A 19 719 719 HOH HOH . 
D 4 HOH A 20 720 720 HOH HOH . 
D 4 HOH A 21 721 721 HOH HOH . 
D 4 HOH A 22 722 722 HOH HOH . 
D 4 HOH A 23 723 723 HOH HOH . 
D 4 HOH A 24 724 724 HOH HOH . 
D 4 HOH A 25 725 725 HOH HOH . 
D 4 HOH A 26 726 726 HOH HOH . 
D 4 HOH A 27 727 727 HOH HOH . 
D 4 HOH A 28 728 728 HOH HOH . 
D 4 HOH A 29 729 729 HOH HOH . 
D 4 HOH A 30 730 730 HOH HOH . 
D 4 HOH A 31 731 731 HOH HOH . 
D 4 HOH A 32 732 732 HOH HOH . 
D 4 HOH A 33 733 733 HOH HOH . 
D 4 HOH A 34 734 734 HOH HOH . 
D 4 HOH A 35 735 735 HOH HOH . 
D 4 HOH A 36 736 736 HOH HOH . 
D 4 HOH A 37 737 737 HOH HOH . 
D 4 HOH A 38 738 738 HOH HOH . 
D 4 HOH A 39 739 739 HOH HOH . 
D 4 HOH A 40 740 740 HOH HOH . 
D 4 HOH A 41 741 741 HOH HOH . 
D 4 HOH A 42 742 742 HOH HOH . 
D 4 HOH A 43 743 743 HOH HOH . 
D 4 HOH A 44 744 744 HOH HOH . 
D 4 HOH A 45 745 745 HOH HOH . 
D 4 HOH A 46 746 746 HOH HOH . 
D 4 HOH A 47 747 747 HOH HOH . 
D 4 HOH A 48 748 748 HOH HOH . 
D 4 HOH A 49 749 749 HOH HOH . 
D 4 HOH A 50 750 750 HOH HOH . 
D 4 HOH A 51 751 751 HOH HOH . 
D 4 HOH A 52 752 752 HOH HOH . 
D 4 HOH A 53 753 753 HOH HOH . 
D 4 HOH A 54 754 754 HOH HOH . 
D 4 HOH A 55 755 755 HOH HOH . 
D 4 HOH A 56 756 756 HOH HOH . 
D 4 HOH A 57 757 757 HOH HOH . 
D 4 HOH A 58 758 758 HOH HOH . 
D 4 HOH A 59 759 759 HOH HOH . 
D 4 HOH A 60 760 760 HOH HOH . 
D 4 HOH A 61 761 761 HOH HOH . 
D 4 HOH A 62 762 762 HOH HOH . 
D 4 HOH A 63 763 763 HOH HOH . 
D 4 HOH A 64 764 764 HOH HOH . 
D 4 HOH A 65 765 765 HOH HOH . 
D 4 HOH A 66 766 766 HOH HOH . 
D 4 HOH A 67 767 767 HOH HOH . 
D 4 HOH A 68 768 768 HOH HOH . 
D 4 HOH A 69 769 769 HOH HOH . 
D 4 HOH A 70 770 770 HOH HOH . 
D 4 HOH A 71 771 771 HOH HOH . 
D 4 HOH A 72 772 772 HOH HOH . 
D 4 HOH A 73 773 773 HOH HOH . 
D 4 HOH A 74 774 774 HOH HOH . 
D 4 HOH A 75 775 775 HOH HOH . 
D 4 HOH A 76 776 776 HOH HOH . 
D 4 HOH A 77 777 777 HOH HOH . 
D 4 HOH A 78 778 778 HOH HOH . 
D 4 HOH A 79 779 779 HOH HOH . 
D 4 HOH A 80 780 780 HOH HOH . 
D 4 HOH A 81 781 781 HOH HOH . 
D 4 HOH A 82 782 782 HOH HOH . 
D 4 HOH A 83 783 783 HOH HOH . 
D 4 HOH A 84 784 784 HOH HOH . 
D 4 HOH A 85 785 785 HOH HOH . 
D 4 HOH A 86 786 786 HOH HOH . 
D 4 HOH A 87 787 787 HOH HOH . 
D 4 HOH A 88 788 788 HOH HOH . 
D 4 HOH A 89 789 789 HOH HOH . 
D 4 HOH A 90 790 790 HOH HOH . 
D 4 HOH A 91 791 791 HOH HOH . 
D 4 HOH A 92 792 792 HOH HOH . 
D 4 HOH A 93 793 793 HOH HOH . 
D 4 HOH A 94 794 794 HOH HOH . 
D 4 HOH A 95 795 795 HOH HOH . 
D 4 HOH A 96 796 796 HOH HOH . 
D 4 HOH A 97 797 797 HOH HOH . 
D 4 HOH A 98 798 798 HOH HOH . 
D 4 HOH A 99 799 799 HOH HOH . 
D 4 HOH A 100 800 800 HOH HOH . 
D 4 HOH A 101 801 801 HOH HOH . 
D 4 HOH A 102 802 802 HOH HOH . 
D 4 HOH A 103 803 803 HOH HOH . 
D 4 HOH A 104 804 804 HOH HOH . 
D 4 HOH A 105 805 805 HOH HOH . 
D 4 HOH A 106 806 806 HOH HOH . 
D 4 HOH A 107 807 807 HOH HOH . 
D 4 HOH A 108 808 808 HOH HOH . 
D 4 HOH A 109 809 809 HOH HOH . 
D 4 HOH A 110 810 810 HOH HOH . 
D 4 HOH A 111 811 811 HOH HOH . 
D 4 HOH A 112 812 812 HOH HOH . 
D 4 HOH A 113 813 813 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PIO . . . B 2 15.1 1.972 40.441 1 39.78 ? C1 PIO 601 A 1 
HETATM 2 O O1 PIO . . . B 2 16.288 2.258 39.68 1 41.94 ? O1 PIO 601 A 1 
HETATM 3 P P1 PIO . . . B 2 17.002 1.215 38.666 1 40.95 ? P1 PIO 601 A 1 
HETATM 4 C C2 PIO . . . B 2 14.053 1.253 39.598 1 40.48 ? C2 PIO 601 A 1 
HETATM 5 O O2 PIO . . . B 2 13.765 2.025 38.426 1 41.23 ? O2 PIO 601 A 1 
HETATM 6 C C3 PIO . . . B 2 12.786 1.025 40.408 1 39.86 ? C3 PIO 601 A 1 
HETATM 7 O O3 PIO . . . B 2 11.894 0.296 39.572 1 40.22 ? O3 PIO 601 A 1 
HETATM 8 C C4 PIO . . . B 2 12.188 2.354 40.903 1 38.83 ? C4 PIO 601 A 1 
HETATM 9 O O4 PIO . . . B 2 10.944 2.145 41.586 1 39.3 ? O4 PIO 601 A 1 
HETATM 10 P P4 PIO . . . B 2 9.593 1.629 40.864 1 37.57 ? P4 PIO 601 A 1 
HETATM 11 C C5 PIO . . . B 2 13.208 3.044 41.808 1 38.57 ? C5 PIO 601 A 1 
HETATM 12 O O5 PIO . . . B 2 12.757 4.31 42.315 1 37.39 ? O5 PIO 601 A 1 
HETATM 13 P P5 PIO . . . B 2 12.726 4.709 43.889 1 36.27 ? P5 PIO 601 A 1 
HETATM 14 C C6 PIO . . . B 2 14.499 3.261 41.004 1 38.81 ? C6 PIO 601 A 1 
HETATM 15 O O6 PIO . . . B 2 15.469 3.921 41.825 1 36.69 ? O6 PIO 601 A 1 
HETATM 16 O O11 PIO . . . B 2 17.117 -0.108 39.368 1 40.91 ? O11 PIO 601 A 1 
HETATM 17 O O12 PIO . . . B 2 16.286 1.322 37.343 1 42.42 ? O12 PIO 601 A 1 
HETATM 18 O O13 PIO . . . B 2 18.491 1.79 38.426 1 42.61 ? O13 PIO 601 A 1 
HETATM 19 C C1A PIO . . . B 2 21.667 3.71 38.384 1 44.4 ? C1A PIO 601 A 1 
HETATM 20 O O1A PIO . . . B 2 21.547 4.204 39.494 1 44.72 ? O1A PIO 601 A 1 
HETATM 21 C C1B PIO . . . B 2 18.849 2.546 33.988 1 44.97 ? C1B PIO 601 A 1 
HETATM 22 C C1C PIO . . . B 2 19.539 1.078 38.133 1 44.95 ? C1C PIO 601 A 1 
HETATM 23 C C2A PIO . . . B 2 23.033 3.584 37.749 1 43.58 ? C2A PIO 601 A 1 
HETATM 24 C C2C PIO . . . B 2 20.555 1.888 37.327 1 44.92 ? C2C PIO 601 A 1 
HETATM 25 O O2C PIO . . . B 2 20.475 3.27 37.676 1 44.71 ? O2C PIO 601 A 1 
HETATM 26 C C3A PIO . . . B 2 24.127 3.497 38.808 1 42.79 ? C3A PIO 601 A 1 
HETATM 27 C C3C PIO . . . B 2 20.289 1.712 35.835 1 45.05 ? C3C PIO 601 A 1 
HETATM 28 O O3C PIO . . . B 2 19.265 2.595 35.382 1 45.05 ? O3C PIO 601 A 1 
HETATM 29 O O41 PIO . . . B 2 9.575 0.154 41.158 1 38.45 ? O41 PIO 601 A 1 
HETATM 30 O O42 PIO . . . B 2 8.484 2.402 41.516 1 39.83 ? O42 PIO 601 A 1 
HETATM 31 O O43 PIO . . . B 2 9.742 1.948 39.397 1 38.43 ? O43 PIO 601 A 1 
HETATM 32 O O51 PIO . . . B 2 14.165 4.898 44.276 1 37.6 ? O51 PIO 601 A 1 
HETATM 33 O O52 PIO . . . B 2 11.96 5.986 44.024 1 36.68 ? O52 PIO 601 A 1 
HETATM 34 O O53 PIO . . . B 2 12.008 3.526 44.491 1 35.54 ? O53 PIO 601 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           34 
#