data_4NSB
#
_model_server_result.job_id            1DNN_TDDJz6No-lBE9pmLw 
_model_server_result.datetime_utc      '2024-11-13 19:42:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nsb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    4NSB 
#
_exptl.entry_id    4NSB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NSB 
_cell.length_a            60.742 
_cell.length_b            66.922 
_cell.length_c            106.66 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NSB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 30 A CYS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf2 A SG CYS 278 A CYS 279 1_555 A SG CYS 342 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
covale ? covale1 A ND2 ASN 39 A ASN 39 1_555 B C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 258 n n 
C1 O1 NAG sing 259 n n 
C1 O5 NAG sing 260 n n 
C1 H1 NAG sing 261 n n 
C2 C3 NAG sing 262 n n 
C2 N2 NAG sing 263 n n 
C2 H2 NAG sing 264 n n 
C3 C4 NAG sing 265 n n 
C3 O3 NAG sing 266 n n 
C3 H3 NAG sing 267 n n 
C4 C5 NAG sing 268 n n 
C4 O4 NAG sing 269 n n 
C4 H4 NAG sing 270 n n 
C5 C6 NAG sing 271 n n 
C5 O5 NAG sing 272 n n 
C5 H5 NAG sing 273 n n 
C6 O6 NAG sing 274 n n 
C6 H61 NAG sing 275 n n 
C6 H62 NAG sing 276 n n 
C7 C8 NAG sing 277 n n 
C7 N2 NAG sing 278 n n 
C7 O7 NAG doub 279 n n 
C8 H81 NAG sing 280 n n 
C8 H82 NAG sing 281 n n 
C8 H83 NAG sing 282 n n 
N2 HN2 NAG sing 283 n n 
O1 HO1 NAG sing 284 n n 
O3 HO3 NAG sing 285 n n 
O4 HO4 NAG sing 286 n n 
O6 HO6 NAG sing 287 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4NSB 
_atom_sites.fract_transf_matrix[1][1]    0.016463 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014943 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009376 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 401 401 NAG NAG . 
C 3 AIN A 1 402 1 AIN AIN . 
D 4 HOH A 1 501 501 HOH HOH . 
D 4 HOH A 2 502 502 HOH HOH . 
D 4 HOH A 3 503 503 HOH HOH . 
D 4 HOH A 4 504 504 HOH HOH . 
D 4 HOH A 5 505 505 HOH HOH . 
D 4 HOH A 6 506 507 HOH HOH . 
D 4 HOH A 7 507 508 HOH HOH . 
D 4 HOH A 8 508 509 HOH HOH . 
D 4 HOH A 9 509 510 HOH HOH . 
D 4 HOH A 10 510 512 HOH HOH . 
D 4 HOH A 11 511 513 HOH HOH . 
D 4 HOH A 12 512 514 HOH HOH . 
D 4 HOH A 13 513 515 HOH HOH . 
D 4 HOH A 14 514 516 HOH HOH . 
D 4 HOH A 15 515 517 HOH HOH . 
D 4 HOH A 16 516 518 HOH HOH . 
D 4 HOH A 17 517 519 HOH HOH . 
D 4 HOH A 18 518 520 HOH HOH . 
D 4 HOH A 19 519 521 HOH HOH . 
D 4 HOH A 20 520 522 HOH HOH . 
D 4 HOH A 21 521 523 HOH HOH . 
D 4 HOH A 22 522 524 HOH HOH . 
D 4 HOH A 23 523 525 HOH HOH . 
D 4 HOH A 24 524 526 HOH HOH . 
D 4 HOH A 25 525 527 HOH HOH . 
D 4 HOH A 26 526 529 HOH HOH . 
D 4 HOH A 27 527 530 HOH HOH . 
D 4 HOH A 28 528 532 HOH HOH . 
D 4 HOH A 29 529 533 HOH HOH . 
D 4 HOH A 30 530 534 HOH HOH . 
D 4 HOH A 31 531 535 HOH HOH . 
D 4 HOH A 32 532 536 HOH HOH . 
D 4 HOH A 33 533 537 HOH HOH . 
D 4 HOH A 34 534 538 HOH HOH . 
D 4 HOH A 35 535 539 HOH HOH . 
D 4 HOH A 36 536 540 HOH HOH . 
D 4 HOH A 37 537 541 HOH HOH . 
D 4 HOH A 38 538 542 HOH HOH . 
D 4 HOH A 39 539 545 HOH HOH . 
D 4 HOH A 40 540 546 HOH HOH . 
D 4 HOH A 41 541 547 HOH HOH . 
D 4 HOH A 42 542 549 HOH HOH . 
D 4 HOH A 43 543 550 HOH HOH . 
D 4 HOH A 44 544 551 HOH HOH . 
D 4 HOH A 45 545 552 HOH HOH . 
D 4 HOH A 46 546 553 HOH HOH . 
D 4 HOH A 47 547 554 HOH HOH . 
D 4 HOH A 48 548 555 HOH HOH . 
D 4 HOH A 49 549 556 HOH HOH . 
D 4 HOH A 50 550 558 HOH HOH . 
D 4 HOH A 51 551 560 HOH HOH . 
D 4 HOH A 52 552 561 HOH HOH . 
D 4 HOH A 53 553 562 HOH HOH . 
D 4 HOH A 54 554 565 HOH HOH . 
D 4 HOH A 55 555 566 HOH HOH . 
D 4 HOH A 56 556 567 HOH HOH . 
D 4 HOH A 57 557 568 HOH HOH . 
D 4 HOH A 58 558 569 HOH HOH . 
D 4 HOH A 59 559 570 HOH HOH . 
D 4 HOH A 60 560 571 HOH HOH . 
D 4 HOH A 61 561 573 HOH HOH . 
D 4 HOH A 62 562 574 HOH HOH . 
D 4 HOH A 63 563 577 HOH HOH . 
D 4 HOH A 64 564 579 HOH HOH . 
D 4 HOH A 65 565 580 HOH HOH . 
D 4 HOH A 66 566 581 HOH HOH . 
D 4 HOH A 67 567 583 HOH HOH . 
D 4 HOH A 68 568 584 HOH HOH . 
D 4 HOH A 69 569 587 HOH HOH . 
D 4 HOH A 70 570 591 HOH HOH . 
D 4 HOH A 71 571 592 HOH HOH . 
D 4 HOH A 72 572 594 HOH HOH . 
D 4 HOH A 73 573 595 HOH HOH . 
D 4 HOH A 74 574 596 HOH HOH . 
D 4 HOH A 75 575 598 HOH HOH . 
D 4 HOH A 76 576 599 HOH HOH . 
D 4 HOH A 77 577 600 HOH HOH . 
D 4 HOH A 78 578 601 HOH HOH . 
D 4 HOH A 79 579 603 HOH HOH . 
D 4 HOH A 80 580 604 HOH HOH . 
D 4 HOH A 81 581 605 HOH HOH . 
D 4 HOH A 82 582 606 HOH HOH . 
D 4 HOH A 83 583 607 HOH HOH . 
D 4 HOH A 84 584 608 HOH HOH . 
D 4 HOH A 85 585 609 HOH HOH . 
D 4 HOH A 86 586 610 HOH HOH . 
D 4 HOH A 87 587 613 HOH HOH . 
D 4 HOH A 88 588 614 HOH HOH . 
D 4 HOH A 89 589 615 HOH HOH . 
D 4 HOH A 90 590 616 HOH HOH . 
D 4 HOH A 91 591 617 HOH HOH . 
D 4 HOH A 92 592 619 HOH HOH . 
D 4 HOH A 93 593 620 HOH HOH . 
D 4 HOH A 94 594 621 HOH HOH . 
D 4 HOH A 95 595 622 HOH HOH . 
D 4 HOH A 96 596 624 HOH HOH . 
D 4 HOH A 97 597 625 HOH HOH . 
D 4 HOH A 98 598 626 HOH HOH . 
D 4 HOH A 99 599 628 HOH HOH . 
D 4 HOH A 100 600 630 HOH HOH . 
D 4 HOH A 101 601 631 HOH HOH . 
D 4 HOH A 102 602 632 HOH HOH . 
D 4 HOH A 103 603 633 HOH HOH . 
D 4 HOH A 104 604 635 HOH HOH . 
D 4 HOH A 105 605 637 HOH HOH . 
D 4 HOH A 106 606 638 HOH HOH . 
D 4 HOH A 107 607 639 HOH HOH . 
D 4 HOH A 108 608 1 HOH HOH . 
D 4 HOH A 109 609 2 HOH HOH . 
D 4 HOH A 110 610 3 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . B 2 -17.891 18.007 7.43 1 25.54 ? C1 NAG 401 A 1 
HETATM 2 C C2 NAG . . . B 2 -17.415 18.513 8.819 1 27.62 ? C2 NAG 401 A 1 
HETATM 3 C C3 NAG . . . B 2 -18.046 19.803 9.361 1 29.47 ? C3 NAG 401 A 1 
HETATM 4 C C4 NAG . . . B 2 -18.666 20.656 8.261 1 28.34 ? C4 NAG 401 A 1 
HETATM 5 C C5 NAG . . . B 2 -19.564 19.768 7.438 1 28.14 ? C5 NAG 401 A 1 
HETATM 6 C C6 NAG . . . B 2 -20.355 20.557 6.421 1 28.48 ? C6 NAG 401 A 1 
HETATM 7 C C7 NAG . . . B 2 -16.539 16.709 10.199 1 29.69 ? C7 NAG 401 A 1 
HETATM 8 C C8 NAG . . . B 2 -16.766 15.672 11.295 1 30.97 ? C8 NAG 401 A 1 
HETATM 9 N N2 NAG . . . B 2 -17.582 17.445 9.801 1 28.6 ? N2 NAG 401 A 1 
HETATM 10 O O3 NAG . . . B 2 -17.035 20.555 10.007 1 29.37 ? O3 NAG 401 A 1 
HETATM 11 O O4 NAG . . . B 2 -19.417 21.734 8.82 1 28.88 ? O4 NAG 401 A 1 
HETATM 12 O O5 NAG . . . B 2 -18.755 18.875 6.686 1 25.88 ? O5 NAG 401 A 1 
HETATM 13 O O6 NAG . . . B 2 -19.719 20.497 5.145 1 27.3 ? O6 NAG 401 A 1 
HETATM 14 O O7 NAG . . . B 2 -15.414 16.842 9.718 1 28.93 ? O7 NAG 401 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#