data_4NSG # _model_server_result.job_id Xa-VjATehEC9LBsSS_fINw _model_server_result.datetime_utc '2024-11-24 20:23:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nsg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":221}' # _entry.id 4NSG # _exptl.entry_id 4NSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.248 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description carboplatin _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NSG _cell.length_a 78.377 _cell.length_b 78.377 _cell.length_c 37.213 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 U N N ? 6 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A NH1 ARG 14 A ARG 14 1_555 V PT1 QPT . A QPT 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc2 A ND1 HIS 15 A HIS 15 1_555 U PT1 QPT . A QPT 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc3 A NE2 HIS 15 A HIS 15 1_555 V PT1 QPT . A QPT 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc4 A O SER 60 A SER 60 1_555 K NA NA . A NA 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc5 A O CYS 64 A CYS 64 1_555 K NA NA . A NA 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc6 A OG SER 72 A SER 72 1_555 K NA NA . A NA 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc7 A O ARG 73 A ARG 73 1_555 K NA NA . A NA 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc8 K NA NA . A NA 210 1_555 W O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc9 K NA NA . A NA 210 1_555 W O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? # _chem_comp.formula 'C6 H12 N2 O4 Pt 2' _chem_comp.formula_weight 371.248 _chem_comp.id QPT _chem_comp.mon_nstd_flag . _chem_comp.name carboplatin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 PT1 QPT sing 292 n n PT1 N1 QPT sing 293 n n N2 H1 QPT sing 294 n n N2 H2 QPT sing 295 n n N1 H3 QPT sing 296 n n N1 H4 QPT sing 297 n n PT1 O2 QPT sing 298 n n PT1 O1 QPT sing 299 n n O1 C1 QPT sing 300 n n O2 C2 QPT sing 301 n n C1 C3 QPT sing 302 n n C1 O4 QPT doub 303 n n C2 O3 QPT doub 304 n n C2 C3 QPT sing 305 n n C3 C7 QPT sing 306 n n C3 C5 QPT sing 307 n n C5 C6 QPT sing 308 n n C6 C7 QPT sing 309 n n C5 H5 QPT sing 310 n n C5 H6 QPT sing 311 n n C6 H7 QPT sing 312 n n C6 H8 QPT sing 313 n n C7 H9 QPT sing 314 n n C7 H10 QPT sing 315 n n N2 H11 QPT sing 316 n n N1 H12 QPT sing 317 n n # _atom_sites.entry_id 4NSG _atom_sites.fract_transf_matrix[1][1] 0.012759 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012759 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR A 1 201 1 BR BR . C 2 BR A 1 202 2 BR BR . D 2 BR A 1 203 1 BR BR . E 2 BR A 1 204 1 BR BR . F 2 BR A 1 205 1 BR BR . G 2 BR A 1 206 1 BR BR . H 2 BR A 1 207 1 BR BR . I 2 BR A 1 208 1 BR BR . J 2 BR A 1 209 1 BR BR . K 3 NA A 1 210 1 NA NA . L 4 DMS A 1 211 1 DMS DMS . M 4 DMS A 1 212 2 DMS DMS . N 4 DMS A 1 213 3 DMS DMS . O 4 DMS A 1 214 4 DMS DMS . P 5 ACT A 1 215 1 ACT ACT . Q 5 ACT A 1 216 3 ACT ACT . R 5 ACT A 1 217 4 ACT ACT . S 5 ACT A 1 218 5 ACT ACT . T 5 ACT A 1 219 6 ACT ACT . U 6 QPT A 1 220 1 QPT QPT . V 6 QPT A 1 221 1 QPT QPT . W 7 HOH A 1 301 2 HOH HOH . W 7 HOH A 2 302 3 HOH HOH . W 7 HOH A 3 303 4 HOH HOH . W 7 HOH A 4 304 5 HOH HOH . W 7 HOH A 5 305 6 HOH HOH . W 7 HOH A 6 306 7 HOH HOH . W 7 HOH A 7 307 8 HOH HOH . W 7 HOH A 8 308 9 HOH HOH . W 7 HOH A 9 309 10 HOH HOH . W 7 HOH A 10 310 11 HOH HOH . W 7 HOH A 11 311 12 HOH HOH . W 7 HOH A 12 312 13 HOH HOH . W 7 HOH A 13 313 14 HOH HOH . W 7 HOH A 14 314 15 HOH HOH . W 7 HOH A 15 315 16 HOH HOH . W 7 HOH A 16 316 17 HOH HOH . W 7 HOH A 17 317 18 HOH HOH . W 7 HOH A 18 318 19 HOH HOH . W 7 HOH A 19 319 20 HOH HOH . W 7 HOH A 20 320 21 HOH HOH . W 7 HOH A 21 321 22 HOH HOH . W 7 HOH A 22 322 23 HOH HOH . W 7 HOH A 23 323 24 HOH HOH . W 7 HOH A 24 324 25 HOH HOH . W 7 HOH A 25 325 26 HOH HOH . W 7 HOH A 26 326 28 HOH HOH . W 7 HOH A 27 327 29 HOH HOH . W 7 HOH A 28 328 30 HOH HOH . W 7 HOH A 29 329 31 HOH HOH . W 7 HOH A 30 330 32 HOH HOH . W 7 HOH A 31 331 33 HOH HOH . W 7 HOH A 32 332 34 HOH HOH . W 7 HOH A 33 333 35 HOH HOH . W 7 HOH A 34 334 36 HOH HOH . W 7 HOH A 35 335 37 HOH HOH . W 7 HOH A 36 336 38 HOH HOH . W 7 HOH A 37 337 39 HOH HOH . W 7 HOH A 38 338 40 HOH HOH . W 7 HOH A 39 339 41 HOH HOH . W 7 HOH A 40 340 42 HOH HOH . W 7 HOH A 41 341 43 HOH HOH . W 7 HOH A 42 342 44 HOH HOH . W 7 HOH A 43 343 45 HOH HOH . W 7 HOH A 44 344 46 HOH HOH . W 7 HOH A 45 345 47 HOH HOH . W 7 HOH A 46 346 48 HOH HOH . W 7 HOH A 47 347 49 HOH HOH . W 7 HOH A 48 348 50 HOH HOH . W 7 HOH A 49 349 51 HOH HOH . W 7 HOH A 50 350 52 HOH HOH . W 7 HOH A 51 351 53 HOH HOH . W 7 HOH A 52 352 54 HOH HOH . W 7 HOH A 53 353 55 HOH HOH . W 7 HOH A 54 354 56 HOH HOH . W 7 HOH A 55 355 57 HOH HOH . W 7 HOH A 56 356 58 HOH HOH . W 7 HOH A 57 357 59 HOH HOH . W 7 HOH A 58 358 60 HOH HOH . W 7 HOH A 59 359 61 HOH HOH . W 7 HOH A 60 360 63 HOH HOH . W 7 HOH A 61 361 64 HOH HOH . W 7 HOH A 62 362 65 HOH HOH . W 7 HOH A 63 363 66 HOH HOH . W 7 HOH A 64 364 67 HOH HOH . W 7 HOH A 65 365 68 HOH HOH . W 7 HOH A 66 366 69 HOH HOH . W 7 HOH A 67 367 70 HOH HOH . W 7 HOH A 68 368 71 HOH HOH . W 7 HOH A 69 369 72 HOH HOH . W 7 HOH A 70 370 73 HOH HOH . W 7 HOH A 71 371 74 HOH HOH . W 7 HOH A 72 372 76 HOH HOH . W 7 HOH A 73 373 77 HOH HOH . W 7 HOH A 74 374 78 HOH HOH . W 7 HOH A 75 375 79 HOH HOH . W 7 HOH A 76 376 80 HOH HOH . W 7 HOH A 77 377 81 HOH HOH . W 7 HOH A 78 378 82 HOH HOH . W 7 HOH A 79 379 84 HOH HOH . W 7 HOH A 80 380 85 HOH HOH . W 7 HOH A 81 381 86 HOH HOH . W 7 HOH A 82 382 87 HOH HOH . W 7 HOH A 83 383 88 HOH HOH . W 7 HOH A 84 384 89 HOH HOH . W 7 HOH A 85 385 90 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol PT _atom_site.label_atom_id PT1 _atom_site.label_comp_id QPT _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id V _atom_site.label_entity_id 6 _atom_site.Cartn_x -9.553 _atom_site.Cartn_y -8.741 _atom_site.Cartn_z -13.886 _atom_site.occupancy 0.28 _atom_site.B_iso_or_equiv 43.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id PT1 _atom_site.auth_comp_id QPT _atom_site.auth_seq_id 221 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #