data_4NSI # _model_server_result.job_id eWzEkvllUM_E9cWNQtmeqg _model_server_result.datetime_utc '2024-11-13 17:57:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nsi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 4NSI # _exptl.entry_id 4NSI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.248 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description carboplatin _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NSI _cell.length_a 77.713 _cell.length_b 77.713 _cell.length_c 36.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc1 A NH2 ARG 14 A ARG 14 1_555 E PT1 QPT . A QPT 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc2 A NE2 HIS 15 A HIS 15 1_555 E PT1 QPT . A QPT 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc3 A ND1 HIS 15 A HIS 15 1_555 F PT1 QPT . A QPT 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? # _chem_comp.formula 'C6 H12 N2 O4 Pt 2' _chem_comp.formula_weight 371.248 _chem_comp.id QPT _chem_comp.mon_nstd_flag . _chem_comp.name carboplatin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 PT1 QPT sing 303 n n PT1 N1 QPT sing 304 n n N2 H1 QPT sing 305 n n N2 H2 QPT sing 306 n n N1 H3 QPT sing 307 n n N1 H4 QPT sing 308 n n PT1 O2 QPT sing 309 n n PT1 O1 QPT sing 310 n n O1 C1 QPT sing 311 n n O2 C2 QPT sing 312 n n C1 C3 QPT sing 313 n n C1 O4 QPT doub 314 n n C2 O3 QPT doub 315 n n C2 C3 QPT sing 316 n n C3 C7 QPT sing 317 n n C3 C5 QPT sing 318 n n C5 C6 QPT sing 319 n n C6 C7 QPT sing 320 n n C5 H5 QPT sing 321 n n C5 H6 QPT sing 322 n n C6 H7 QPT sing 323 n n C6 H8 QPT sing 324 n n C7 H9 QPT sing 325 n n C7 H10 QPT sing 326 n n N2 H11 QPT sing 327 n n N1 H12 QPT sing 328 n n # _atom_sites.entry_id 4NSI _atom_sites.fract_transf_matrix[1][1] 0.012868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 201 1 DMS DMS . C 2 DMS A 1 202 3 DMS DMS . D 2 DMS A 1 203 4 DMS DMS . E 3 QPT A 1 204 1 QPT PT . F 3 QPT A 1 205 1 QPT QPT . G 4 FLC A 1 206 1 FLC FLC . H 5 HOH A 1 301 1 HOH HOH . H 5 HOH A 2 302 2 HOH HOH . H 5 HOH A 3 303 3 HOH HOH . H 5 HOH A 4 304 4 HOH HOH . H 5 HOH A 5 305 5 HOH HOH . H 5 HOH A 6 306 6 HOH HOH . H 5 HOH A 7 307 7 HOH HOH . H 5 HOH A 8 308 9 HOH HOH . H 5 HOH A 9 309 10 HOH HOH . H 5 HOH A 10 310 11 HOH HOH . H 5 HOH A 11 311 13 HOH HOH . H 5 HOH A 12 312 14 HOH HOH . H 5 HOH A 13 313 16 HOH HOH . H 5 HOH A 14 314 17 HOH HOH . H 5 HOH A 15 315 19 HOH HOH . H 5 HOH A 16 316 20 HOH HOH . H 5 HOH A 17 317 22 HOH HOH . H 5 HOH A 18 318 23 HOH HOH . H 5 HOH A 19 319 24 HOH HOH . H 5 HOH A 20 320 26 HOH HOH . H 5 HOH A 21 321 27 HOH HOH . H 5 HOH A 22 322 28 HOH HOH . H 5 HOH A 23 323 30 HOH HOH . H 5 HOH A 24 324 31 HOH HOH . H 5 HOH A 25 325 32 HOH HOH . H 5 HOH A 26 326 33 HOH HOH . H 5 HOH A 27 327 34 HOH HOH . H 5 HOH A 28 328 35 HOH HOH . H 5 HOH A 29 329 37 HOH HOH . H 5 HOH A 30 330 38 HOH HOH . H 5 HOH A 31 331 41 HOH HOH . H 5 HOH A 32 332 42 HOH HOH . H 5 HOH A 33 333 43 HOH HOH . H 5 HOH A 34 334 44 HOH HOH . H 5 HOH A 35 335 46 HOH HOH . H 5 HOH A 36 336 47 HOH HOH . H 5 HOH A 37 337 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 QPT . . . F 3 -10.378 -13.282 -8.883 1 55.25 ? N2 QPT 205 A 1 HETATM 2 PT PT1 QPT . . . F 3 -11.611 -11.986 -7.906 0.65 55.82 ? PT1 QPT 205 A 1 HETATM 3 O O2 QPT . . . F 3 -11.506 -13.067 -6.247 1 56.61 ? O2 QPT 205 A 1 HETATM 4 O O1 QPT . . . F 3 -12.844 -10.772 -7.001 1 45.55 ? O1 QPT 205 A 1 HETATM 5 C C1 QPT . . . F 3 -12.359 -9.464 -6.646 1 42.4 ? C1 QPT 205 A 1 HETATM 6 C C2 QPT . . . F 3 -12.091 -12.627 -4.984 1 54.99 ? C2 QPT 205 A 1 HETATM 7 O O4 QPT . . . F 3 -12.679 -9.036 -5.557 1 40.59 ? O4 QPT 205 A 1 HETATM 8 O O3 QPT . . . F 3 -12.014 -13.362 -4.011 1 56.33 ? O3 QPT 205 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #