data_4NSJ # _model_server_result.job_id NlMepMnk3pyRoI7exwyDYg _model_server_result.datetime_utc '2024-11-13 17:46:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":223}' # _entry.id 4NSJ # _exptl.entry_id 4NSJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.248 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description carboplatin _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NSJ _cell.length_a 77.496 _cell.length_b 77.496 _cell.length_c 37.123 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id X _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc1 A ND1 HIS 15 A HIS 15 1_555 X PT1 QPT . A QPT 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc2 A O SER 60 A SER 60 1_555 W NA NA . A NA 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc3 A O CYS 64 A CYS 64 1_555 W NA NA . A NA 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc4 A OG SER 72 A SER 72 1_555 W NA NA . A NA 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc5 A O ARG 73 A ARG 73 1_555 W NA NA . A NA 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc6 T O1 FMT . A FMT 219 1_555 W NA NA . A NA 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc7 W NA NA . A NA 222 1_555 Y O HOH . A HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? # _chem_comp.formula 'C6 H12 N2 O4 Pt 2' _chem_comp.formula_weight 371.248 _chem_comp.id QPT _chem_comp.mon_nstd_flag . _chem_comp.name carboplatin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 PT1 QPT sing 290 n n PT1 N1 QPT sing 291 n n N2 H1 QPT sing 292 n n N2 H2 QPT sing 293 n n N1 H3 QPT sing 294 n n N1 H4 QPT sing 295 n n PT1 O2 QPT sing 296 n n PT1 O1 QPT sing 297 n n O1 C1 QPT sing 298 n n O2 C2 QPT sing 299 n n C1 C3 QPT sing 300 n n C1 O4 QPT doub 301 n n C2 O3 QPT doub 302 n n C2 C3 QPT sing 303 n n C3 C7 QPT sing 304 n n C3 C5 QPT sing 305 n n C5 C6 QPT sing 306 n n C6 C7 QPT sing 307 n n C5 H5 QPT sing 308 n n C5 H6 QPT sing 309 n n C6 H7 QPT sing 310 n n C6 H8 QPT sing 311 n n C7 H9 QPT sing 312 n n C7 H10 QPT sing 313 n n N2 H11 QPT sing 314 n n N1 H12 QPT sing 315 n n # _atom_sites.entry_id 4NSJ _atom_sites.fract_transf_matrix[1][1] 0.012904 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012904 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 201 1 DMS DMS . C 2 DMS A 1 202 2 DMS DMS . D 2 DMS A 1 203 3 DMS DMS . E 2 DMS A 1 204 4 DMS DMS . F 2 DMS A 1 205 6 DMS DMS . G 2 DMS A 1 206 7 DMS DMS . H 2 DMS A 1 207 8 DMS DMS . I 2 DMS A 1 208 10 DMS DMS . J 3 FMT A 1 209 1 FMT FMT . K 3 FMT A 1 210 2 FMT FMT . L 3 FMT A 1 211 3 FMT FMT . M 3 FMT A 1 212 4 FMT FMT . N 3 FMT A 1 213 5 FMT FMT . O 3 FMT A 1 214 6 FMT FMT . P 3 FMT A 1 215 7 FMT FMT . Q 3 FMT A 1 216 8 FMT FMT . R 3 FMT A 1 217 9 FMT FMT . S 3 FMT A 1 218 10 FMT FMT . T 3 FMT A 1 219 11 FMT FMT . U 3 FMT A 1 220 12 FMT FMT . V 3 FMT A 1 221 13 FMT FMT . W 4 NA A 1 222 1 NA NA . X 5 QPT A 1 223 1 QPT QPT . Y 6 HOH A 1 301 1 HOH HOH . Y 6 HOH A 2 302 2 HOH HOH . Y 6 HOH A 3 303 3 HOH HOH . Y 6 HOH A 4 304 4 HOH HOH . Y 6 HOH A 5 305 5 HOH HOH . Y 6 HOH A 6 306 6 HOH HOH . Y 6 HOH A 7 307 7 HOH HOH . Y 6 HOH A 8 308 8 HOH HOH . Y 6 HOH A 9 309 9 HOH HOH . Y 6 HOH A 10 310 10 HOH HOH . Y 6 HOH A 11 311 11 HOH HOH . Y 6 HOH A 12 312 12 HOH HOH . Y 6 HOH A 13 313 13 HOH HOH . Y 6 HOH A 14 314 14 HOH HOH . Y 6 HOH A 15 315 15 HOH HOH . Y 6 HOH A 16 316 16 HOH HOH . Y 6 HOH A 17 317 17 HOH HOH . Y 6 HOH A 18 318 18 HOH HOH . Y 6 HOH A 19 319 19 HOH HOH . Y 6 HOH A 20 320 20 HOH HOH . Y 6 HOH A 21 321 21 HOH HOH . Y 6 HOH A 22 322 22 HOH HOH . Y 6 HOH A 23 323 23 HOH HOH . Y 6 HOH A 24 324 24 HOH HOH . Y 6 HOH A 25 325 25 HOH HOH . Y 6 HOH A 26 326 26 HOH HOH . Y 6 HOH A 27 327 27 HOH HOH . Y 6 HOH A 28 328 28 HOH HOH . Y 6 HOH A 29 329 29 HOH HOH . Y 6 HOH A 30 330 31 HOH HOH . Y 6 HOH A 31 331 32 HOH HOH . Y 6 HOH A 32 332 33 HOH HOH . Y 6 HOH A 33 333 34 HOH HOH . Y 6 HOH A 34 334 35 HOH HOH . Y 6 HOH A 35 335 36 HOH HOH . Y 6 HOH A 36 336 37 HOH HOH . Y 6 HOH A 37 337 38 HOH HOH . Y 6 HOH A 38 338 39 HOH HOH . Y 6 HOH A 39 339 40 HOH HOH . Y 6 HOH A 40 340 41 HOH HOH . Y 6 HOH A 41 341 42 HOH HOH . Y 6 HOH A 42 342 43 HOH HOH . Y 6 HOH A 43 343 44 HOH HOH . Y 6 HOH A 44 344 45 HOH HOH . Y 6 HOH A 45 345 46 HOH HOH . Y 6 HOH A 46 346 47 HOH HOH . Y 6 HOH A 47 347 48 HOH HOH . Y 6 HOH A 48 348 49 HOH HOH . Y 6 HOH A 49 349 50 HOH HOH . Y 6 HOH A 50 350 51 HOH HOH . Y 6 HOH A 51 351 52 HOH HOH . Y 6 HOH A 52 352 53 HOH HOH . Y 6 HOH A 53 353 55 HOH HOH . Y 6 HOH A 54 354 56 HOH HOH . Y 6 HOH A 55 355 57 HOH HOH . Y 6 HOH A 56 356 58 HOH HOH . Y 6 HOH A 57 357 60 HOH HOH . Y 6 HOH A 58 358 61 HOH HOH . Y 6 HOH A 59 359 62 HOH HOH . Y 6 HOH A 60 360 63 HOH HOH . Y 6 HOH A 61 361 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 PT PT1 QPT . . . X 5 12.248 -11.398 1.309 0.29 39.32 ? PT1 QPT 223 A 1 HETATM 2 N N1 QPT . . . X 5 10.85 -12.146 2.589 1 38.03 ? N1 QPT 223 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #