data_4NTF # _model_server_result.job_id CDojFJhMLtJlkoR6FZSWkQ _model_server_result.datetime_utc '2024-11-10 02:34:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ntf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4NTF # _exptl.entry_id 4NTF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.491 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-HEXYLGLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NTF _cell.length_a 169.107 _cell.length_b 169.107 _cell.length_c 169.107 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NTF _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 24_544 -y,-z-1/2,x-1/2 0 -1 0 0 0 -1 1 0 0 0 -84.5535 -84.5535 3 'crystal symmetry operation' 30_554 z+1/2,-x,-y-1/2 0 0 1 -1 0 0 0 -1 0 84.5535 0 -84.5535 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H30 N3 O6 S 1' _chem_comp.formula_weight 392.491 _chem_comp.id GTX _chem_comp.mon_nstd_flag . _chem_comp.name S-HEXYLGLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GTX sing 129 n n N1 HN11 GTX sing 130 n n N1 HN12 GTX sing 131 n n N1 HN13 GTX sing 132 n n CA1 C1 GTX sing 133 n n CA1 CB1 GTX sing 134 n n CA1 HA1 GTX sing 135 n n C1 O11 GTX doub 136 n n C1 O12 GTX sing 137 n n O12 HO2 GTX sing 138 n n CB1 CG1 GTX sing 139 n n CB1 HB11 GTX sing 140 n n CB1 HB12 GTX sing 141 n n CG1 CD1 GTX sing 142 n n CG1 HG11 GTX sing 143 n n CG1 HG12 GTX sing 144 n n CD1 OE1 GTX doub 145 n n CD1 N2 GTX sing 146 n n N2 CA2 GTX sing 147 n n N2 HN2 GTX sing 148 n n CA2 C2 GTX sing 149 n n CA2 CB2 GTX sing 150 n n CA2 HA2 GTX sing 151 n n C2 O2 GTX doub 152 n n C2 N3 GTX sing 153 n n CB2 SG2 GTX sing 154 n n CB2 HB21 GTX sing 155 n n CB2 HB22 GTX sing 156 n n SG2 C1S GTX sing 157 n n C1S C2S GTX sing 158 n n C1S HS11 GTX sing 159 n n C1S HS12 GTX sing 160 n n C2S C3S GTX sing 161 n n C2S HS21 GTX sing 162 n n C2S HS22 GTX sing 163 n n C3S C4S GTX sing 164 n n C3S HS31 GTX sing 165 n n C3S HS32 GTX sing 166 n n C4S C5S GTX sing 167 n n C4S HS41 GTX sing 168 n n C4S HS42 GTX sing 169 n n C5S C6S GTX sing 170 n n C5S HS51 GTX sing 171 n n C5S HS52 GTX sing 172 n n C6S HS61 GTX sing 173 n n C6S HS62 GTX sing 174 n n C6S HS63 GTX sing 175 n n N3 CA3 GTX sing 176 n n N3 HN3 GTX sing 177 n n CA3 C3 GTX sing 178 n n CA3 HA31 GTX sing 179 n n CA3 HA32 GTX sing 180 n n C3 O31 GTX doub 181 n n C3 O32 GTX sing 182 n n O32 HO3 GTX sing 183 n n # _atom_sites.entry_id 4NTF _atom_sites.fract_transf_matrix[1][1] 0.005913 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GTX A 1 201 1 GTX GTX . C 3 PLM A 1 202 1152 PLM PLM . D 3 PLM A 1 203 1153 PLM PLM . E 3 PLM A 1 204 1154 PLM PLM . F 3 PLM A 1 205 1156 PLM PLM . G 4 SO4 A 1 206 1 SO4 SO4 . H 5 NI A 1 207 1 NI NI . I 6 HOH A 1 301 2 HOH HOH . I 6 HOH A 2 302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTX . . . B 2 15.318 -7.438 -66.491 1 81.66 ? N1 GTX 201 A 1 HETATM 2 C CA1 GTX . . . B 2 15.204 -6.37 -65.535 1 82.21 ? CA1 GTX 201 A 1 HETATM 3 C C1 GTX . . . B 2 14.223 -5.304 -65.963 1 84.38 ? C1 GTX 201 A 1 HETATM 4 O O11 GTX . . . B 2 13.652 -5.357 -67.091 1 79.16 -1 O11 GTX 201 A 1 HETATM 5 O O12 GTX . . . B 2 13.956 -4.33 -65.191 1 85.8 ? O12 GTX 201 A 1 HETATM 6 C CB1 GTX . . . B 2 16.557 -5.776 -65.343 1 84.39 ? CB1 GTX 201 A 1 HETATM 7 C CG1 GTX . . . B 2 17.273 -5.963 -64.056 1 89.71 ? CG1 GTX 201 A 1 HETATM 8 C CD1 GTX . . . B 2 16.587 -5.651 -62.772 1 96.32 ? CD1 GTX 201 A 1 HETATM 9 O OE1 GTX . . . B 2 15.565 -4.986 -62.767 1 91.06 ? OE1 GTX 201 A 1 HETATM 10 N N2 GTX . . . B 2 17.168 -6.142 -61.558 1 111.26 ? N2 GTX 201 A 1 HETATM 11 C CA2 GTX . . . B 2 16.647 -5.946 -60.226 1 122.02 ? CA2 GTX 201 A 1 HETATM 12 C C2 GTX . . . B 2 15.186 -6.259 -60.185 1 126.3 ? C2 GTX 201 A 1 HETATM 13 O O2 GTX . . . B 2 14.766 -7.233 -59.567 1 132.08 ? O2 GTX 201 A 1 HETATM 14 C CB2 GTX . . . B 2 16.915 -4.565 -59.721 1 124.24 ? CB2 GTX 201 A 1 HETATM 15 S SG2 GTX . . . B 2 18.484 -4.155 -59.006 1 126.71 ? SG2 GTX 201 A 1 HETATM 16 C C1S GTX . . . B 2 18.404 -4.403 -57.262 1 109.63 ? C1S GTX 201 A 1 HETATM 17 C C2S GTX . . . B 2 19.189 -5.564 -56.755 1 104.91 ? C2S GTX 201 A 1 HETATM 18 C C3S GTX . . . B 2 20.405 -5.915 -57.543 1 97.29 ? C3S GTX 201 A 1 HETATM 19 C C4S GTX . . . B 2 20.951 -7.295 -57.419 1 94.56 ? C4S GTX 201 A 1 HETATM 20 C C5S GTX . . . B 2 21.582 -7.703 -56.133 1 95.62 ? C5S GTX 201 A 1 HETATM 21 C C6S GTX . . . B 2 22.675 -8.727 -56.191 1 94.56 ? C6S GTX 201 A 1 HETATM 22 N N3 GTX . . . B 2 14.298 -5.4 -60.9 1 121.17 ? N3 GTX 201 A 1 HETATM 23 C CA3 GTX . . . B 2 12.885 -5.597 -60.938 1 113.37 ? CA3 GTX 201 A 1 HETATM 24 C C3 GTX . . . B 2 12.204 -4.528 -61.694 1 104.62 ? C3 GTX 201 A 1 HETATM 25 O O31 GTX . . . B 2 12.398 -3.347 -61.317 1 100.21 ? O31 GTX 201 A 1 HETATM 26 O O32 GTX . . . B 2 11.493 -4.806 -62.698 1 104.63 -1 O32 GTX 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #