data_4NTJ # _model_server_result.job_id NLT4fI5R4HubXwgQ44huCg _model_server_result.datetime_utc '2024-12-14 21:51:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ntj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 4NTJ # _exptl.entry_id 4NTJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 470.541 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 6-{4-[(benzylsulfonyl)carbamoyl]piperidin-1-yl}-5-cyano-2-methylpyridine-3-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.08 _cell.angle_gamma 90 _cell.entry_id 4NTJ _cell.length_a 98.65 _cell.length_b 156.43 _cell.length_c 47.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 26 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 17 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 385 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 270 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.038 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C23 H26 N4 O5 S' _chem_comp.formula_weight 470.541 _chem_comp.id AZJ _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 6-{4-[(benzylsulfonyl)carbamoyl]piperidin-1-yl}-5-cyano-2-methylpyridine-3-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ CAI AZJ doub 70 n y CAJ CAL AZJ sing 71 n y CAI CAK AZJ sing 72 n y CAL CBA AZJ doub 73 n y CAK CAM AZJ doub 74 n y CBA CAM AZJ sing 75 n y CBA CAT AZJ sing 76 n n CAT SBG AZJ sing 77 n n OAF SBG AZJ doub 78 n n SBG OAG AZJ doub 79 n n SBG NAV AZJ sing 80 n n NAV CAX AZJ sing 81 n n CAX OAD AZJ doub 82 n n CAX CBE AZJ sing 83 n n CBE CAQ AZJ sing 84 n n CBE CAP AZJ sing 85 n n CAQ CAS AZJ sing 86 n n CAS NBF AZJ sing 87 n n CAP CAR AZJ sing 88 n n CAR NBF AZJ sing 89 n n NBF CBD AZJ sing 90 n n NAC CAH AZJ trip 91 n n CAH CBB AZJ sing 92 n n CBD CBB AZJ doub 93 n y CBD NAU AZJ sing 94 n y CBB CAN AZJ sing 95 n y NAU CAZ AZJ doub 96 n y CAN CBC AZJ doub 97 n y CAZ CBC AZJ sing 98 n y CAZ CAB AZJ sing 99 n n CBC CAY AZJ sing 100 n n CAY OAW AZJ sing 101 n n CAY OAE AZJ doub 102 n n CAO OAW AZJ sing 103 n n CAO CAA AZJ sing 104 n n CAA H1 AZJ sing 105 n n CAA H2 AZJ sing 106 n n CAA H3 AZJ sing 107 n n CAB H4 AZJ sing 108 n n CAB H5 AZJ sing 109 n n CAB H6 AZJ sing 110 n n CAI H7 AZJ sing 111 n n CAJ H8 AZJ sing 112 n n CAK H9 AZJ sing 113 n n CAL H10 AZJ sing 114 n n CAM H11 AZJ sing 115 n n CAN H12 AZJ sing 116 n n CAO H13 AZJ sing 117 n n CAO H14 AZJ sing 118 n n CAP H15 AZJ sing 119 n n CAP H16 AZJ sing 120 n n CAQ H17 AZJ sing 121 n n CAQ H18 AZJ sing 122 n n CAR H19 AZJ sing 123 n n CAR H20 AZJ sing 124 n n CAS H21 AZJ sing 125 n n CAS H22 AZJ sing 126 n n CAT H23 AZJ sing 127 n n CAT H24 AZJ sing 128 n n NAV H25 AZJ sing 129 n n CBE H26 AZJ sing 130 n n # _atom_sites.entry_id 4NTJ _atom_sites.fract_transf_matrix[1][1] 0.010137 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003907 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AZJ A 1 1201 1 AZJ AZD . C 3 CLR A 1 1202 1 CLR CLR . D 3 CLR A 1 1203 2 CLR CLR . E 4 OLC A 1 1204 3 OLC OLC . F 4 OLC A 1 1205 4 OLC OLC . G 5 HOH A 1 1301 6 HOH HOH . G 5 HOH A 2 1302 7 HOH HOH . G 5 HOH A 3 1303 8 HOH HOH . G 5 HOH A 4 1304 9 HOH HOH . G 5 HOH A 5 1305 10 HOH HOH . G 5 HOH A 6 1306 11 HOH HOH . G 5 HOH A 7 1307 12 HOH HOH . G 5 HOH A 8 1308 13 HOH HOH . G 5 HOH A 9 1309 14 HOH HOH . G 5 HOH A 10 1310 15 HOH HOH . G 5 HOH A 11 1311 16 HOH HOH . G 5 HOH A 12 1312 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA AZJ . . . B 2 15.921 94.175 57.389 1 85.43 ? CAA AZJ 1201 A 1 HETATM 2 C CAB AZJ . . . B 2 13.771 100.339 55.769 1 84.96 ? CAB AZJ 1201 A 1 HETATM 3 N NAC AZJ . . . B 2 18.732 97.525 52.124 1 87.26 ? NAC AZJ 1201 A 1 HETATM 4 O OAD AZJ . . . B 2 19.314 103.057 48.946 1 103.04 ? OAD AZJ 1201 A 1 HETATM 5 O OAE AZJ . . . B 2 13.955 97.948 57.289 1 87.05 ? OAE AZJ 1201 A 1 HETATM 6 O OAF AZJ . . . B 2 17.219 106.038 46.455 1 112.02 ? OAF AZJ 1201 A 1 HETATM 7 O OAG AZJ . . . B 2 19.154 105.981 48.045 1 111.85 ? OAG AZJ 1201 A 1 HETATM 8 C CAH AZJ . . . B 2 17.88 97.98 52.757 1 86.65 ? CAH AZJ 1201 A 1 HETATM 9 C CAI AZJ . . . B 2 17.564 101.563 43.169 1 102.56 ? CAI AZJ 1201 A 1 HETATM 10 C CAJ AZJ . . . B 2 18.081 102.779 42.715 1 102.93 ? CAJ AZJ 1201 A 1 HETATM 11 C CAK AZJ . . . B 2 17.619 101.249 44.531 1 102.88 ? CAK AZJ 1201 A 1 HETATM 12 C CAL AZJ . . . B 2 18.656 103.676 43.624 1 104.09 ? CAL AZJ 1201 A 1 HETATM 13 C CAM AZJ . . . B 2 18.188 102.148 45.439 1 104.19 ? CAM AZJ 1201 A 1 HETATM 14 C CAN AZJ . . . B 2 16.367 97.888 54.67 1 85.15 ? CAN AZJ 1201 A 1 HETATM 15 C CAO AZJ . . . B 2 15.031 95.287 56.826 1 86.46 ? CAO AZJ 1201 A 1 HETATM 16 C CAP AZJ . . . B 2 17.038 102.905 51.108 1 93.81 ? CAP AZJ 1201 A 1 HETATM 17 C CAQ AZJ . . . B 2 17.577 100.787 49.712 1 96.16 ? CAQ AZJ 1201 A 1 HETATM 18 C CAR AZJ . . . B 2 16.174 102.007 51.996 1 92.57 ? CAR AZJ 1201 A 1 HETATM 19 C CAS AZJ . . . B 2 16.673 99.984 50.671 1 93.23 ? CAS AZJ 1201 A 1 HETATM 20 C CAT AZJ . . . B 2 19.319 104.282 45.881 1 109.52 ? CAT AZJ 1201 A 1 HETATM 21 N NAU AZJ . . . B 2 15.254 100.295 53.982 1 85.89 ? NAU AZJ 1201 A 1 HETATM 22 N NAV AZJ . . . B 2 17.427 104.047 48.091 1 107.99 ? NAV AZJ 1201 A 1 HETATM 23 O OAW AZJ . . . B 2 15.714 96.552 56.895 1 87.84 ? OAW AZJ 1201 A 1 HETATM 24 C CAX AZJ . . . B 2 18.087 103.156 48.854 1 102.97 ? CAX AZJ 1201 A 1 HETATM 25 C CAY AZJ . . . B 2 14.935 97.644 56.605 1 87.3 ? CAY AZJ 1201 A 1 HETATM 26 C CAZ AZJ . . . B 2 14.798 99.668 55.091 1 86.56 ? CAZ AZJ 1201 A 1 HETATM 27 C CBA AZJ . . . B 2 18.684 103.383 44.996 1 106.06 ? CBA AZJ 1201 A 1 HETATM 28 C CBB AZJ . . . B 2 16.814 98.566 53.536 1 85.79 ? CBB AZJ 1201 A 1 HETATM 29 C CBC AZJ . . . B 2 15.35 98.411 55.485 1 86.79 ? CBC AZJ 1201 A 1 HETATM 30 C CBD AZJ . . . B 2 16.213 99.786 53.177 1 87.1 ? CBD AZJ 1201 A 1 HETATM 31 C CBE AZJ . . . B 2 17.143 102.292 49.698 1 97.63 ? CBE AZJ 1201 A 1 HETATM 32 N NBF AZJ . . . B 2 16.703 100.604 52.028 1 90.82 ? NBF AZJ 1201 A 1 HETATM 33 S SBG AZJ . . . B 2 18.251 105.128 47.141 1 111.75 ? SBG AZJ 1201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 33 #