data_4NTJ # _model_server_result.job_id iRHh-FLLjMGQSUcQELMG1w _model_server_result.datetime_utc '2024-12-14 21:48:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ntj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1205}' # _entry.id 4NTJ # _exptl.entry_id 4NTJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.08 _cell.angle_gamma 90 _cell.entry_id 4NTJ _cell.length_a 98.65 _cell.length_b 156.43 _cell.length_c 47.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 26 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 17 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 385 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 270 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.038 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 375 n n C10 C9 OLC doub 376 n n C10 C11 OLC sing 377 n n C9 C8 OLC sing 378 n n C17 C16 OLC sing 379 z n C11 C12 OLC sing 380 n n C8 C7 OLC sing 381 n n C24 C22 OLC sing 382 n n C24 O25 OLC sing 383 n n C16 C15 OLC sing 384 n n C12 C13 OLC sing 385 n n C7 C6 OLC sing 386 n n C15 C14 OLC sing 387 n n C13 C14 OLC sing 388 n n C6 C5 OLC sing 389 n n C5 C4 OLC sing 390 n n C4 C3 OLC sing 391 n n C3 C2 OLC sing 392 n n C2 C1 OLC sing 393 n n C21 C22 OLC sing 394 n n C21 O20 OLC sing 395 n n C1 O19 OLC doub 396 n n C1 O20 OLC sing 397 n n C22 O23 OLC sing 398 n n C18 H18 OLC sing 399 n n C18 H18A OLC sing 400 n n C18 H18B OLC sing 401 n n C10 H10 OLC sing 402 n n C9 H9 OLC sing 403 n n C17 H17 OLC sing 404 n n C17 H17A OLC sing 405 n n C11 H11 OLC sing 406 n n C11 H11A OLC sing 407 n n C8 H8 OLC sing 408 n n C8 H8A OLC sing 409 n n C24 H24 OLC sing 410 n n C24 H24A OLC sing 411 n n C16 H16 OLC sing 412 n n C16 H16A OLC sing 413 n n C12 H12 OLC sing 414 n n C12 H12A OLC sing 415 n n C7 H7 OLC sing 416 n n C7 H7A OLC sing 417 n n C15 H15 OLC sing 418 n n C15 H15A OLC sing 419 n n C13 H13 OLC sing 420 n n C13 H13A OLC sing 421 n n C6 H6 OLC sing 422 n n C6 H6A OLC sing 423 n n C14 H14 OLC sing 424 n n C14 H14A OLC sing 425 n n C5 H5 OLC sing 426 n n C5 H5A OLC sing 427 n n C4 H4 OLC sing 428 n n C4 H4A OLC sing 429 n n C3 H3 OLC sing 430 n n C3 H3A OLC sing 431 n n C2 H2 OLC sing 432 n n C2 H2A OLC sing 433 n n C21 H21 OLC sing 434 n n C21 H21A OLC sing 435 n n C22 H22 OLC sing 436 n n O25 HO25 OLC sing 437 n n O23 HO23 OLC sing 438 n n # _atom_sites.entry_id 4NTJ _atom_sites.fract_transf_matrix[1][1] 0.010137 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003907 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AZJ A 1 1201 1 AZJ AZD . C 3 CLR A 1 1202 1 CLR CLR . D 3 CLR A 1 1203 2 CLR CLR . E 4 OLC A 1 1204 3 OLC OLC . F 4 OLC A 1 1205 4 OLC OLC . G 5 HOH A 1 1301 6 HOH HOH . G 5 HOH A 2 1302 7 HOH HOH . G 5 HOH A 3 1303 8 HOH HOH . G 5 HOH A 4 1304 9 HOH HOH . G 5 HOH A 5 1305 10 HOH HOH . G 5 HOH A 6 1306 11 HOH HOH . G 5 HOH A 7 1307 12 HOH HOH . G 5 HOH A 8 1308 13 HOH HOH . G 5 HOH A 9 1309 14 HOH HOH . G 5 HOH A 10 1310 15 HOH HOH . G 5 HOH A 11 1311 16 HOH HOH . G 5 HOH A 12 1312 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . F 4 32.68 81.915 54.464 1 130.64 ? C10 OLC 1205 A 1 HETATM 2 C C9 OLC . . . F 4 31.498 81.319 54.692 1 132.03 ? C9 OLC 1205 A 1 HETATM 3 C C11 OLC . . . F 4 32.884 83.362 54.063 1 128.88 ? C11 OLC 1205 A 1 HETATM 4 C C8 OLC . . . F 4 30.131 81.974 54.594 1 132.6 ? C8 OLC 1205 A 1 HETATM 5 C C24 OLC . . . F 4 22.003 72.736 54.852 1 130.73 ? C24 OLC 1205 A 1 HETATM 6 C C12 OLC . . . F 4 34.345 83.57 53.679 1 127.51 ? C12 OLC 1205 A 1 HETATM 7 C C7 OLC . . . F 4 29.057 80.89 54.669 1 132.65 ? C7 OLC 1205 A 1 HETATM 8 C C13 OLC . . . F 4 34.769 85.024 53.851 1 126.7 ? C13 OLC 1205 A 1 HETATM 9 C C6 OLC . . . F 4 27.649 81.449 54.49 1 132.4 ? C6 OLC 1205 A 1 HETATM 10 C C14 OLC . . . F 4 36.137 85.285 53.229 1 126.02 ? C14 OLC 1205 A 1 HETATM 11 C C5 OLC . . . F 4 26.662 80.342 54.119 1 132.53 ? C5 OLC 1205 A 1 HETATM 12 C C4 OLC . . . F 4 25.72 79.991 55.269 1 132.22 ? C4 OLC 1205 A 1 HETATM 13 C C3 OLC . . . F 4 24.626 79.023 54.824 1 131.9 ? C3 OLC 1205 A 1 HETATM 14 C C2 OLC . . . F 4 24.658 77.73 55.64 1 132.33 ? C2 OLC 1205 A 1 HETATM 15 C C21 OLC . . . F 4 22.34 75.206 54.5 1 132.27 ? C21 OLC 1205 A 1 HETATM 16 C C1 OLC . . . F 4 24.488 76.499 54.769 1 133.45 ? C1 OLC 1205 A 1 HETATM 17 C C22 OLC . . . F 4 22.262 73.836 53.824 1 131.34 ? C22 OLC 1205 A 1 HETATM 18 O O19 OLC . . . F 4 25.122 76.372 53.73 1 135.01 ? O19 OLC 1205 A 1 HETATM 19 O O25 OLC . . . F 4 20.628 72.73 55.256 1 130.39 ? O25 OLC 1205 A 1 HETATM 20 O O23 OLC . . . F 4 21.218 73.839 52.837 1 130.6 ? O23 OLC 1205 A 1 HETATM 21 O O20 OLC . . . F 4 23.589 75.419 55.169 1 132.76 ? O20 OLC 1205 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 21 #