data_4NXR # _model_server_result.job_id HhBavPwltZJ47MbU9HJyVQ _model_server_result.datetime_utc '2025-03-13 19:25:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 4NXR # _exptl.entry_id 4NXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NXR _cell.length_a 26.358 _cell.length_b 50.323 _cell.length_c 61.942 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 101 n n N1 C6 EPE sing 102 n n N1 C9 EPE sing 103 n n C2 C3 EPE sing 104 n n C2 H21 EPE sing 105 n n C2 H22 EPE sing 106 n n C3 N4 EPE sing 107 n n C3 H31 EPE sing 108 n n C3 H32 EPE sing 109 n n N4 C5 EPE sing 110 n n N4 C7 EPE sing 111 n n C5 C6 EPE sing 112 n n C5 H51 EPE sing 113 n n C5 H52 EPE sing 114 n n C6 H61 EPE sing 115 n n C6 H62 EPE sing 116 n n C7 C8 EPE sing 117 n n C7 H71 EPE sing 118 n n C7 H72 EPE sing 119 n n C8 O8 EPE sing 120 n n C8 H81 EPE sing 121 n n C8 H82 EPE sing 122 n n O8 HO8 EPE sing 123 n n C9 C10 EPE sing 124 n n C9 H91 EPE sing 125 n n C9 H92 EPE sing 126 n n C10 S EPE sing 127 n n C10 H101 EPE sing 128 n n C10 H102 EPE sing 129 n n S O1S EPE doub 130 n n S O2S EPE doub 131 n n S O3S EPE sing 132 n n O3S HOS3 EPE sing 133 n n # _atom_sites.entry_id 4NXR _atom_sites.fract_transf_matrix[1][1] 0.037939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EPE A 1 1001 101 EPE EPE . D 4 ANS B 1 100 100 ANS ANS . E 5 HOH A 1 1101 1 HOH HOH . E 5 HOH A 2 1102 2 HOH HOH . E 5 HOH A 3 1103 3 HOH HOH . E 5 HOH A 4 1104 4 HOH HOH . E 5 HOH A 5 1105 5 HOH HOH . E 5 HOH A 6 1106 7 HOH HOH . E 5 HOH A 7 1107 9 HOH HOH . E 5 HOH A 8 1108 10 HOH HOH . E 5 HOH A 9 1109 11 HOH HOH . E 5 HOH A 10 1110 12 HOH HOH . E 5 HOH A 11 1111 13 HOH HOH . E 5 HOH A 12 1112 14 HOH HOH . E 5 HOH A 13 1113 15 HOH HOH . E 5 HOH A 14 1114 16 HOH HOH . E 5 HOH A 15 1115 17 HOH HOH . E 5 HOH A 16 1116 18 HOH HOH . E 5 HOH A 17 1117 20 HOH HOH . E 5 HOH A 18 1118 21 HOH HOH . E 5 HOH A 19 1119 22 HOH HOH . E 5 HOH A 20 1120 23 HOH HOH . E 5 HOH A 21 1121 24 HOH HOH . E 5 HOH A 22 1122 25 HOH HOH . E 5 HOH A 23 1123 26 HOH HOH . E 5 HOH A 24 1124 28 HOH HOH . E 5 HOH A 25 1125 29 HOH HOH . E 5 HOH A 26 1126 30 HOH HOH . E 5 HOH A 27 1127 31 HOH HOH . E 5 HOH A 28 1128 32 HOH HOH . E 5 HOH A 29 1129 33 HOH HOH . E 5 HOH A 30 1130 34 HOH HOH . E 5 HOH A 31 1131 35 HOH HOH . E 5 HOH A 32 1132 36 HOH HOH . E 5 HOH A 33 1133 38 HOH HOH . E 5 HOH A 34 1134 39 HOH HOH . E 5 HOH A 35 1135 40 HOH HOH . E 5 HOH A 36 1136 41 HOH HOH . E 5 HOH A 37 1137 42 HOH HOH . E 5 HOH A 38 1138 43 HOH HOH . E 5 HOH A 39 1139 44 HOH HOH . E 5 HOH A 40 1140 45 HOH HOH . E 5 HOH A 41 1141 46 HOH HOH . E 5 HOH A 42 1142 47 HOH HOH . E 5 HOH A 43 1143 48 HOH HOH . E 5 HOH A 44 1144 49 HOH HOH . E 5 HOH A 45 1145 50 HOH HOH . E 5 HOH A 46 1146 51 HOH HOH . E 5 HOH A 47 1147 52 HOH HOH . E 5 HOH A 48 1148 53 HOH HOH . E 5 HOH A 49 1149 54 HOH HOH . E 5 HOH A 50 1150 56 HOH HOH . E 5 HOH A 51 1151 57 HOH HOH . E 5 HOH A 52 1152 58 HOH HOH . E 5 HOH A 53 1153 59 HOH HOH . E 5 HOH A 54 1154 60 HOH HOH . E 5 HOH A 55 1155 61 HOH HOH . E 5 HOH A 56 1156 62 HOH HOH . E 5 HOH A 57 1157 63 HOH HOH . E 5 HOH A 58 1158 64 HOH HOH . E 5 HOH A 59 1159 65 HOH HOH . E 5 HOH A 60 1160 66 HOH HOH . E 5 HOH A 61 1161 67 HOH HOH . E 5 HOH A 62 1162 68 HOH HOH . E 5 HOH A 63 1163 69 HOH HOH . E 5 HOH A 64 1164 70 HOH HOH . E 5 HOH A 65 1165 71 HOH HOH . E 5 HOH A 66 1166 72 HOH HOH . E 5 HOH A 67 1167 73 HOH HOH . E 5 HOH A 68 1168 74 HOH HOH . E 5 HOH A 69 1169 75 HOH HOH . E 5 HOH A 70 1170 76 HOH HOH . E 5 HOH A 71 1171 77 HOH HOH . E 5 HOH A 72 1172 78 HOH HOH . E 5 HOH A 73 1173 79 HOH HOH . E 5 HOH A 74 1174 80 HOH HOH . E 5 HOH A 75 1175 81 HOH HOH . E 5 HOH A 76 1176 82 HOH HOH . E 5 HOH A 77 1177 83 HOH HOH . E 5 HOH A 78 1178 84 HOH HOH . E 5 HOH A 79 1179 85 HOH HOH . E 5 HOH A 80 1180 86 HOH HOH . E 5 HOH A 81 1181 87 HOH HOH . E 5 HOH A 82 1182 88 HOH HOH . E 5 HOH A 83 1183 91 HOH HOH . E 5 HOH A 84 1184 92 HOH HOH . E 5 HOH A 85 1185 94 HOH HOH . E 5 HOH A 86 1186 96 HOH HOH . E 5 HOH A 87 1187 97 HOH HOH . E 5 HOH A 88 1188 98 HOH HOH . E 5 HOH A 89 1189 99 HOH HOH . F 5 HOH B 1 201 6 HOH HOH . F 5 HOH B 2 202 8 HOH HOH . F 5 HOH B 3 203 19 HOH HOH . F 5 HOH B 4 204 27 HOH HOH . F 5 HOH B 5 205 37 HOH HOH . F 5 HOH B 6 206 55 HOH HOH . F 5 HOH B 7 207 89 HOH HOH . F 5 HOH B 8 208 90 HOH HOH . F 5 HOH B 9 209 93 HOH HOH . F 5 HOH B 10 210 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . C 3 20.738 -19.996 -23.035 1 24.32 ? N1 EPE 1001 A 1 HETATM 2 C C2 EPE . . . C 3 19.663 -19.955 -24.044 1 25.91 ? C2 EPE 1001 A 1 HETATM 3 C C3 EPE . . . C 3 18.659 -18.816 -23.842 1 18.72 ? C3 EPE 1001 A 1 HETATM 4 N N4 EPE . . . C 3 18.291 -18.607 -22.454 1 24.6 ? N4 EPE 1001 A 1 HETATM 5 C C5 EPE . . . C 3 19.286 -18.791 -21.42 1 23.98 ? C5 EPE 1001 A 1 HETATM 6 C C6 EPE . . . C 3 20.181 -19.99 -21.673 1 20.28 ? C6 EPE 1001 A 1 HETATM 7 C C7 EPE . . . C 3 17.024 -18 -22.082 1 23.58 ? C7 EPE 1001 A 1 HETATM 8 C C8 EPE . . . C 3 16.568 -16.941 -23.074 1 21.93 ? C8 EPE 1001 A 1 HETATM 9 O O8 EPE . . . C 3 15.874 -17.59 -24.118 1 28.82 ? O8 EPE 1001 A 1 HETATM 10 C C9 EPE . . . C 3 21.498 -21.258 -23.133 1 22.27 ? C9 EPE 1001 A 1 HETATM 11 C C10 EPE . . . C 3 21.768 -21.671 -24.572 1 23.72 ? C10 EPE 1001 A 1 HETATM 12 S S EPE . . . C 3 23.375 -22.478 -24.812 1 25.55 ? S EPE 1001 A 1 HETATM 13 O O1S EPE . . . C 3 24.37 -21.426 -25.002 1 26.74 ? O1S EPE 1001 A 1 HETATM 14 O O2S EPE . . . C 3 23.728 -23.312 -23.671 1 26.79 ? O2S EPE 1001 A 1 HETATM 15 O O3S EPE . . . C 3 23.309 -23.304 -26.01 1 28.41 ? O3S EPE 1001 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #