data_4NXY
#
_model_server_result.job_id            KyPI1YSw1-zOsDxz2MV80A 
_model_server_result.datetime_utc      '2024-11-22 22:45:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nxy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    4NXY 
#
_exptl.entry_id    4NXY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4NXY 
_cell.length_a            40.056 
_cell.length_b            56.711 
_cell.length_c            74 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NXY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 124 n n 
C1 C2 GOL sing 125 n n 
C1 H11 GOL sing 126 n n 
C1 H12 GOL sing 127 n n 
O1 HO1 GOL sing 128 n n 
C2 O2 GOL sing 129 n n 
C2 C3 GOL sing 130 n n 
C2 H2 GOL sing 131 n n 
O2 HO2 GOL sing 132 n n 
C3 O3 GOL sing 133 n n 
C3 H31 GOL sing 134 n n 
C3 H32 GOL sing 135 n n 
O3 HO3 GOL sing 136 n n 
#
_atom_sites.entry_id                     4NXY 
_atom_sites.fract_transf_matrix[1][1]    0.024965 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017633 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013514 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ETF A 1 201 1 ETF ETF . 
C 3 GOL A 1 202 1 GOL GOL . 
D 4 HOH A 1 301 1 HOH HOH . 
D 4 HOH A 2 302 3 HOH HOH . 
D 4 HOH A 3 303 4 HOH HOH . 
D 4 HOH A 4 304 5 HOH HOH . 
D 4 HOH A 5 305 6 HOH HOH . 
D 4 HOH A 6 306 7 HOH HOH . 
D 4 HOH A 7 307 8 HOH HOH . 
D 4 HOH A 8 308 9 HOH HOH . 
D 4 HOH A 9 309 10 HOH HOH . 
D 4 HOH A 10 310 11 HOH HOH . 
D 4 HOH A 11 311 12 HOH HOH . 
D 4 HOH A 12 312 13 HOH HOH . 
D 4 HOH A 13 313 14 HOH HOH . 
D 4 HOH A 14 314 15 HOH HOH . 
D 4 HOH A 15 315 16 HOH HOH . 
D 4 HOH A 16 316 17 HOH HOH . 
D 4 HOH A 17 317 18 HOH HOH . 
D 4 HOH A 18 318 19 HOH HOH . 
D 4 HOH A 19 319 20 HOH HOH . 
D 4 HOH A 20 320 21 HOH HOH . 
D 4 HOH A 21 321 22 HOH HOH . 
D 4 HOH A 22 322 23 HOH HOH . 
D 4 HOH A 23 323 24 HOH HOH . 
D 4 HOH A 24 324 25 HOH HOH . 
D 4 HOH A 25 325 26 HOH HOH . 
D 4 HOH A 26 326 27 HOH HOH . 
D 4 HOH A 27 327 28 HOH HOH . 
D 4 HOH A 28 328 29 HOH HOH . 
D 4 HOH A 29 329 30 HOH HOH . 
D 4 HOH A 30 330 31 HOH HOH . 
D 4 HOH A 31 331 32 HOH HOH . 
D 4 HOH A 32 332 33 HOH HOH . 
D 4 HOH A 33 333 34 HOH HOH . 
D 4 HOH A 34 334 35 HOH HOH . 
D 4 HOH A 35 335 36 HOH HOH . 
D 4 HOH A 36 336 37 HOH HOH . 
D 4 HOH A 37 337 38 HOH HOH . 
D 4 HOH A 38 338 39 HOH HOH . 
D 4 HOH A 39 339 40 HOH HOH . 
D 4 HOH A 40 340 41 HOH HOH . 
D 4 HOH A 41 341 42 HOH HOH . 
D 4 HOH A 42 342 43 HOH HOH . 
D 4 HOH A 43 343 44 HOH HOH . 
D 4 HOH A 44 344 45 HOH HOH . 
D 4 HOH A 45 345 46 HOH HOH . 
D 4 HOH A 46 346 47 HOH HOH . 
D 4 HOH A 47 347 48 HOH HOH . 
D 4 HOH A 48 348 49 HOH HOH . 
D 4 HOH A 49 349 50 HOH HOH . 
D 4 HOH A 50 350 51 HOH HOH . 
D 4 HOH A 51 351 52 HOH HOH . 
D 4 HOH A 52 352 53 HOH HOH . 
D 4 HOH A 53 353 54 HOH HOH . 
D 4 HOH A 54 354 55 HOH HOH . 
D 4 HOH A 55 355 56 HOH HOH . 
D 4 HOH A 56 356 57 HOH HOH . 
D 4 HOH A 57 357 58 HOH HOH . 
D 4 HOH A 58 358 59 HOH HOH . 
D 4 HOH A 59 359 60 HOH HOH . 
D 4 HOH A 60 360 61 HOH HOH . 
D 4 HOH A 61 361 62 HOH HOH . 
D 4 HOH A 62 362 63 HOH HOH . 
D 4 HOH A 63 363 64 HOH HOH . 
D 4 HOH A 64 364 65 HOH HOH . 
D 4 HOH A 65 365 66 HOH HOH . 
D 4 HOH A 66 366 67 HOH HOH . 
D 4 HOH A 67 367 68 HOH HOH . 
D 4 HOH A 68 368 69 HOH HOH . 
D 4 HOH A 69 369 70 HOH HOH . 
D 4 HOH A 70 370 71 HOH HOH . 
D 4 HOH A 71 371 72 HOH HOH . 
D 4 HOH A 72 372 73 HOH HOH . 
D 4 HOH A 73 373 74 HOH HOH . 
D 4 HOH A 74 374 75 HOH HOH . 
D 4 HOH A 75 375 76 HOH HOH . 
D 4 HOH A 76 376 77 HOH HOH . 
D 4 HOH A 77 377 78 HOH HOH . 
D 4 HOH A 78 378 79 HOH HOH . 
D 4 HOH A 79 379 80 HOH HOH . 
D 4 HOH A 80 380 81 HOH HOH . 
D 4 HOH A 81 381 82 HOH HOH . 
D 4 HOH A 82 382 83 HOH HOH . 
D 4 HOH A 83 383 84 HOH HOH . 
D 4 HOH A 84 384 85 HOH HOH . 
D 4 HOH A 85 385 86 HOH HOH . 
D 4 HOH A 86 386 87 HOH HOH . 
D 4 HOH A 87 387 88 HOH HOH . 
D 4 HOH A 88 388 89 HOH HOH . 
D 4 HOH A 89 389 90 HOH HOH . 
D 4 HOH A 90 390 91 HOH HOH . 
D 4 HOH A 91 391 92 HOH HOH . 
D 4 HOH A 92 392 93 HOH HOH . 
D 4 HOH A 93 393 94 HOH HOH . 
D 4 HOH A 94 394 95 HOH HOH . 
D 4 HOH A 95 395 96 HOH HOH . 
D 4 HOH A 96 396 97 HOH HOH . 
D 4 HOH A 97 397 98 HOH HOH . 
D 4 HOH A 98 398 99 HOH HOH . 
D 4 HOH A 99 399 100 HOH HOH . 
D 4 HOH A 100 400 101 HOH HOH . 
D 4 HOH A 101 401 102 HOH HOH . 
D 4 HOH A 102 402 103 HOH HOH . 
D 4 HOH A 103 403 104 HOH HOH . 
D 4 HOH A 104 404 105 HOH HOH . 
D 4 HOH A 105 405 106 HOH HOH . 
D 4 HOH A 106 406 107 HOH HOH . 
D 4 HOH A 107 407 108 HOH HOH . 
D 4 HOH A 108 408 109 HOH HOH . 
D 4 HOH A 109 409 110 HOH HOH . 
D 4 HOH A 110 410 111 HOH HOH . 
D 4 HOH A 111 411 112 HOH HOH . 
D 4 HOH A 112 412 113 HOH HOH . 
D 4 HOH A 113 413 114 HOH HOH . 
D 4 HOH A 114 414 115 HOH HOH . 
D 4 HOH A 115 415 116 HOH HOH . 
D 4 HOH A 116 416 117 HOH HOH . 
D 4 HOH A 117 417 118 HOH HOH . 
D 4 HOH A 118 418 119 HOH HOH . 
D 4 HOH A 119 419 120 HOH HOH . 
D 4 HOH A 120 420 121 HOH HOH . 
D 4 HOH A 121 421 122 HOH HOH . 
D 4 HOH A 122 422 123 HOH HOH . 
D 4 HOH A 123 423 124 HOH HOH . 
D 4 HOH A 124 424 125 HOH HOH . 
D 4 HOH A 125 425 127 HOH HOH . 
D 4 HOH A 126 426 128 HOH HOH . 
D 4 HOH A 127 427 129 HOH HOH . 
D 4 HOH A 128 428 130 HOH HOH . 
D 4 HOH A 129 429 131 HOH HOH . 
D 4 HOH A 130 430 134 HOH HOH . 
D 4 HOH A 131 431 135 HOH HOH . 
D 4 HOH A 132 432 136 HOH HOH . 
D 4 HOH A 133 433 137 HOH HOH . 
D 4 HOH A 134 434 138 HOH HOH . 
D 4 HOH A 135 435 139 HOH HOH . 
D 4 HOH A 136 436 140 HOH HOH . 
D 4 HOH A 137 437 141 HOH HOH . 
D 4 HOH A 138 438 142 HOH HOH . 
D 4 HOH A 139 439 143 HOH HOH . 
D 4 HOH A 140 440 144 HOH HOH . 
D 4 HOH A 141 441 145 HOH HOH . 
D 4 HOH A 142 442 146 HOH HOH . 
D 4 HOH A 143 443 147 HOH HOH . 
D 4 HOH A 144 444 148 HOH HOH . 
D 4 HOH A 145 445 149 HOH HOH . 
D 4 HOH A 146 446 150 HOH HOH . 
D 4 HOH A 147 447 152 HOH HOH . 
D 4 HOH A 148 448 153 HOH HOH . 
D 4 HOH A 149 449 154 HOH HOH . 
D 4 HOH A 150 450 155 HOH HOH . 
D 4 HOH A 151 451 156 HOH HOH . 
D 4 HOH A 152 452 157 HOH HOH . 
D 4 HOH A 153 453 158 HOH HOH . 
D 4 HOH A 154 454 159 HOH HOH . 
D 4 HOH A 155 455 160 HOH HOH . 
D 4 HOH A 156 456 161 HOH HOH . 
D 4 HOH A 157 457 162 HOH HOH . 
D 4 HOH A 158 458 163 HOH HOH . 
D 4 HOH A 159 459 164 HOH HOH . 
D 4 HOH A 160 460 165 HOH HOH . 
D 4 HOH A 161 461 166 HOH HOH . 
D 4 HOH A 162 462 167 HOH HOH . 
D 4 HOH A 163 463 168 HOH HOH . 
D 4 HOH A 164 464 169 HOH HOH . 
D 4 HOH A 165 465 170 HOH HOH . 
D 4 HOH A 166 466 171 HOH HOH . 
D 4 HOH A 167 467 172 HOH HOH . 
D 4 HOH A 168 468 173 HOH HOH . 
D 4 HOH A 169 469 174 HOH HOH . 
D 4 HOH A 170 470 175 HOH HOH . 
D 4 HOH A 171 471 176 HOH HOH . 
D 4 HOH A 172 472 177 HOH HOH . 
D 4 HOH A 173 473 178 HOH HOH . 
D 4 HOH A 174 474 179 HOH HOH . 
D 4 HOH A 175 475 180 HOH HOH . 
D 4 HOH A 176 476 181 HOH HOH . 
D 4 HOH A 177 477 182 HOH HOH . 
D 4 HOH A 178 478 183 HOH HOH . 
D 4 HOH A 179 479 184 HOH HOH . 
D 4 HOH A 180 480 185 HOH HOH . 
D 4 HOH A 181 481 186 HOH HOH . 
D 4 HOH A 182 482 187 HOH HOH . 
D 4 HOH A 183 483 188 HOH HOH . 
D 4 HOH A 184 484 189 HOH HOH . 
D 4 HOH A 185 485 190 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 48.682 57.27 0.842 1 18.55 ? C1 GOL 202 A 1 
HETATM 2 O O1 GOL . . . C 3 49.402 58.318 1.484 1 16.61 ? O1 GOL 202 A 1 
HETATM 3 C C2 GOL . . . C 3 49.629 56.035 0.624 1 24.86 ? C2 GOL 202 A 1 
HETATM 4 O O2 GOL . . . C 3 51.081 56.287 0.749 1 36.14 ? O2 GOL 202 A 1 
HETATM 5 C C3 GOL . . . C 3 49.495 55.162 -0.657 1 29.35 ? C3 GOL 202 A 1 
HETATM 6 O O3 GOL . . . C 3 50.502 54.094 -0.533 1 37.75 ? O3 GOL 202 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#