data_4NY9 # _model_server_result.job_id SWmLaIiIs7ADRzpULxYfYg _model_server_result.datetime_utc '2025-03-05 03:02:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ny9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4NY9 # _exptl.entry_id 4NY9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.988 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4NY9 _cell.length_a 91.76 _cell.length_b 91.76 _cell.length_c 85.651 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NY9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 42.8255 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H35 Cl N2 O4' _chem_comp.formula_weight 438.988 _chem_comp.id 2Q4 _chem_comp.mon_nstd_flag . _chem_comp.name N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O28 C12 2Q4 sing 1 n n C10 C9 2Q4 sing 2 n n C10 N24 2Q4 sing 3 n n C9 C12 2Q4 sing 4 n n C12 C5 2Q4 sing 5 n n C12 C13 2Q4 sing 6 n n N24 C11 2Q4 sing 7 n n N24 C7 2Q4 sing 8 n n C1 C5 2Q4 doub 9 n y C1 C3 2Q4 sing 10 n y C16 C22 2Q4 sing 11 n n C5 C2 2Q4 sing 12 n y C11 C13 2Q4 sing 13 n n C3 C6 2Q4 doub 14 n y C13 C14 2Q4 sing 15 n n C13 C15 2Q4 sing 16 n n C22 C17 2Q4 sing 17 n n C22 C21 2Q4 sing 18 n n C7 O26 2Q4 doub 19 n n C7 C21 2Q4 sing 20 n n C2 C4 2Q4 doub 21 n y C6 C4 2Q4 sing 22 n y C6 CL 2Q4 sing 23 n n C21 N25 2Q4 sing 24 n n N25 C8 2Q4 sing 25 n n O29 C23 2Q4 sing 26 n n C8 O27 2Q4 doub 27 n n C8 C20 2Q4 sing 28 n n C23 C20 2Q4 sing 29 n n C23 C18 2Q4 sing 30 n n C23 C19 2Q4 sing 31 n n C3 H1 2Q4 sing 32 n n C4 H2 2Q4 sing 33 n n C2 H3 2Q4 sing 34 n n C1 H4 2Q4 sing 35 n n C9 H5 2Q4 sing 36 n n C9 H6 2Q4 sing 37 n n O28 H7 2Q4 sing 38 n n C14 H8 2Q4 sing 39 n n C14 H9 2Q4 sing 40 n n C14 H10 2Q4 sing 41 n n C15 H11 2Q4 sing 42 n n C15 H12 2Q4 sing 43 n n C15 H13 2Q4 sing 44 n n C11 H14 2Q4 sing 45 n n C11 H15 2Q4 sing 46 n n C10 H16 2Q4 sing 47 n n C10 H17 2Q4 sing 48 n n C21 H18 2Q4 sing 49 n n C22 H19 2Q4 sing 50 n n C17 H20 2Q4 sing 51 n n C17 H21 2Q4 sing 52 n n C17 H22 2Q4 sing 53 n n C16 H23 2Q4 sing 54 n n C16 H24 2Q4 sing 55 n n C16 H25 2Q4 sing 56 n n N25 H26 2Q4 sing 57 n n C20 H27 2Q4 sing 58 n n C20 H28 2Q4 sing 59 n n O29 H29 2Q4 sing 60 n n C19 H30 2Q4 sing 61 n n C19 H31 2Q4 sing 62 n n C19 H32 2Q4 sing 63 n n C18 H33 2Q4 sing 64 n n C18 H34 2Q4 sing 65 n n C18 H35 2Q4 sing 66 n n # _atom_sites.entry_id 4NY9 _atom_sites.fract_transf_matrix[1][1] 0.010898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011675 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2Q4 A 1 501 1 2Q4 LG1 . C 3 GOL A 1 502 1 GOL GOL . D 4 HOH A 1 601 1 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 4 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 6 HOH HOH . D 4 HOH A 7 607 7 HOH HOH . D 4 HOH A 8 608 9 HOH HOH . D 4 HOH A 9 609 10 HOH HOH . D 4 HOH A 10 610 11 HOH HOH . D 4 HOH A 11 611 13 HOH HOH . D 4 HOH A 12 612 16 HOH HOH . D 4 HOH A 13 613 18 HOH HOH . D 4 HOH A 14 614 19 HOH HOH . D 4 HOH A 15 615 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL 2Q4 . . . B 2 8.825 -7.967 2.423 1 84.3 ? CL 2Q4 501 A 1 HETATM 2 C C6 2Q4 . . . B 2 10.259 -8.859 1.811 1 82.06 ? C6 2Q4 501 A 1 HETATM 3 C C3 2Q4 . . . B 2 10.079 -9.988 1.029 1 81.76 ? C3 2Q4 501 A 1 HETATM 4 C C4 2Q4 . . . B 2 11.536 -8.409 2.125 1 82.18 ? C4 2Q4 501 A 1 HETATM 5 C C2 2Q4 . . . B 2 12.639 -9.094 1.65 1 81.79 ? C2 2Q4 501 A 1 HETATM 6 C C5 2Q4 . . . B 2 12.459 -10.227 0.871 1 81.43 ? C5 2Q4 501 A 1 HETATM 7 C C1 2Q4 . . . B 2 11.184 -10.674 0.555 1 81.67 ? C1 2Q4 501 A 1 HETATM 8 C C12 2Q4 . . . B 2 13.65 -10.979 0.369 1 80.77 ? C12 2Q4 501 A 1 HETATM 9 C C9 2Q4 . . . B 2 14.724 -9.947 0.035 1 78.82 ? C9 2Q4 501 A 1 HETATM 10 O O28 2Q4 . . . B 2 13.304 -11.659 -0.845 1 80.64 ? O28 2Q4 501 A 1 HETATM 11 C C13 2Q4 . . . B 2 14.104 -12.047 1.392 1 79.31 ? C13 2Q4 501 A 1 HETATM 12 C C14 2Q4 . . . B 2 13.087 -13.178 1.468 1 78.6 ? C14 2Q4 501 A 1 HETATM 13 C C15 2Q4 . . . B 2 14.248 -11.509 2.811 1 77.87 ? C15 2Q4 501 A 1 HETATM 14 C C11 2Q4 . . . B 2 15.409 -12.647 0.876 1 78.67 ? C11 2Q4 501 A 1 HETATM 15 N N24 2Q4 . . . B 2 16.459 -11.687 0.403 1 77.62 ? N24 2Q4 501 A 1 HETATM 16 C C10 2Q4 . . . B 2 15.962 -10.637 -0.52 1 78.09 ? C10 2Q4 501 A 1 HETATM 17 C C7 2Q4 . . . B 2 17.265 -11.189 1.489 1 74.33 ? C7 2Q4 501 A 1 HETATM 18 O O26 2Q4 . . . B 2 17.342 -9.978 1.727 1 74.49 ? O26 2Q4 501 A 1 HETATM 19 C C21 2Q4 . . . B 2 18.021 -12.204 2.334 1 70.26 ? C21 2Q4 501 A 1 HETATM 20 C C22 2Q4 . . . B 2 18.792 -13.222 1.469 1 67.84 ? C22 2Q4 501 A 1 HETATM 21 C C17 2Q4 . . . B 2 19.206 -14.466 2.246 1 66.15 ? C17 2Q4 501 A 1 HETATM 22 C C16 2Q4 . . . B 2 19.975 -12.619 0.722 1 67.1 ? C16 2Q4 501 A 1 HETATM 23 N N25 2Q4 . . . B 2 18.85 -11.567 3.34 1 68.12 ? N25 2Q4 501 A 1 HETATM 24 C C8 2Q4 . . . B 2 18.715 -11.83 4.64 1 67.5 ? C8 2Q4 501 A 1 HETATM 25 O O27 2Q4 . . . B 2 17.901 -12.636 5.096 1 68.82 ? O27 2Q4 501 A 1 HETATM 26 C C20 2Q4 . . . B 2 19.642 -11.072 5.564 1 64.8 ? C20 2Q4 501 A 1 HETATM 27 C C23 2Q4 . . . B 2 19.568 -9.558 5.329 1 63.99 ? C23 2Q4 501 A 1 HETATM 28 O O29 2Q4 . . . B 2 19.791 -9.271 3.949 1 64.7 ? O29 2Q4 501 A 1 HETATM 29 C C19 2Q4 . . . B 2 20.663 -8.915 6.162 1 63.32 ? C19 2Q4 501 A 1 HETATM 30 C C18 2Q4 . . . B 2 18.218 -8.928 5.652 1 63.68 ? C18 2Q4 501 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #