data_4NYX # _model_server_result.job_id YIwdfpaRzmPG1_s5KB-nuA _model_server_result.datetime_utc '2024-11-16 18:52:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4nyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 4NYX # _exptl.entry_id 4NYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 408.493 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R)-N-[3-(7-methoxy-3,4-dihydroquinolin-1(2H)-yl)propyl]-3-methyl-2-oxo-1,2,3,4-tetrahydroquinoxaline-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.72 _cell.angle_gamma 90 _cell.entry_id 4NYX _cell.length_a 40.047 _cell.length_b 34.358 _cell.length_c 90.934 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4NYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H28 N4 O3' _chem_comp.formula_weight 408.493 _chem_comp.id 2O4 _chem_comp.mon_nstd_flag . _chem_comp.name (3R)-N-[3-(7-methoxy-3,4-dihydroquinolin-1(2H)-yl)propyl]-3-methyl-2-oxo-1,2,3,4-tetrahydroquinoxaline-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 N1 2O4 sing 1 n n C9 C10 2O4 sing 2 n n N1 C8 2O4 sing 3 n n O1 C8 2O4 doub 4 n n C8 C7 2O4 sing 5 n n C7 C6 2O4 doub 6 n y C7 C22 2O4 sing 7 n y C1 C 2O4 sing 8 n n C1 N3 2O4 sing 9 n n C1 C2 2O4 sing 10 n n C6 C5 2O4 sing 11 n y C10 C11 2O4 sing 12 n n C22 N3 2O4 sing 13 n n C22 C3 2O4 doub 14 n y C5 C4 2O4 doub 15 n y C11 N2 2O4 sing 16 n n C3 C4 2O4 sing 17 n y C3 N 2O4 sing 18 n n C2 N 2O4 sing 19 n n C2 O2 2O4 doub 20 n n C12 N2 2O4 sing 21 n n C12 C13 2O4 sing 22 n n N2 C20 2O4 sing 23 n n C13 C14 2O4 sing 24 n n C20 C19 2O4 doub 25 n y C20 C15 2O4 sing 26 n y C19 C18 2O4 sing 27 n y C21 O 2O4 sing 28 n n C14 C15 2O4 sing 29 n n C15 C16 2O4 doub 30 n y C18 O 2O4 sing 31 n n C18 C17 2O4 doub 32 n y C16 C17 2O4 sing 33 n y C4 H1 2O4 sing 34 n n C14 H2 2O4 sing 35 n n C14 H3 2O4 sing 36 n n C5 H4 2O4 sing 37 n n C6 H5 2O4 sing 38 n n C11 H6 2O4 sing 39 n n C11 H7 2O4 sing 40 n n C9 H8 2O4 sing 41 n n C9 H9 2O4 sing 42 n n C10 H10 2O4 sing 43 n n C10 H11 2O4 sing 44 n n C12 H12 2O4 sing 45 n n C12 H13 2O4 sing 46 n n C13 H14 2O4 sing 47 n n C13 H15 2O4 sing 48 n n N1 H16 2O4 sing 49 n n N3 H17 2O4 sing 50 n n N H18 2O4 sing 51 n n C1 H19 2O4 sing 52 n n C H20 2O4 sing 53 n n C H21 2O4 sing 54 n n C H22 2O4 sing 55 n n C19 H23 2O4 sing 56 n n C21 H24 2O4 sing 57 n n C21 H25 2O4 sing 58 n n C21 H26 2O4 sing 59 n n C17 H27 2O4 sing 60 n n C16 H28 2O4 sing 61 n n # _atom_sites.entry_id 4NYX _atom_sites.fract_transf_matrix[1][1] 0.024971 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003384 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029105 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2O4 A 1 1201 1 2O4 DRG . C 3 HOH A 1 1301 1 HOH HOH . C 3 HOH A 2 1302 3 HOH HOH . C 3 HOH A 3 1303 4 HOH HOH . C 3 HOH A 4 1304 5 HOH HOH . C 3 HOH A 5 1305 6 HOH HOH . C 3 HOH A 6 1306 7 HOH HOH . C 3 HOH A 7 1307 9 HOH HOH . C 3 HOH A 8 1308 10 HOH HOH . C 3 HOH A 9 1309 11 HOH HOH . C 3 HOH A 10 1310 12 HOH HOH . C 3 HOH A 11 1311 14 HOH HOH . C 3 HOH A 12 1312 15 HOH HOH . C 3 HOH A 13 1313 17 HOH HOH . C 3 HOH A 14 1314 18 HOH HOH . C 3 HOH A 15 1315 19 HOH HOH . C 3 HOH A 16 1316 21 HOH HOH . C 3 HOH A 17 1317 22 HOH HOH . C 3 HOH A 18 1318 23 HOH HOH . C 3 HOH A 19 1319 24 HOH HOH . C 3 HOH A 20 1320 26 HOH HOH . C 3 HOH A 21 1321 27 HOH HOH . C 3 HOH A 22 1322 28 HOH HOH . C 3 HOH A 23 1323 29 HOH HOH . C 3 HOH A 24 1324 30 HOH HOH . C 3 HOH A 25 1325 31 HOH HOH . C 3 HOH A 26 1326 32 HOH HOH . C 3 HOH A 27 1327 33 HOH HOH . C 3 HOH A 28 1328 34 HOH HOH . C 3 HOH A 29 1329 35 HOH HOH . C 3 HOH A 30 1330 36 HOH HOH . C 3 HOH A 31 1331 37 HOH HOH . C 3 HOH A 32 1332 38 HOH HOH . C 3 HOH A 33 1333 40 HOH HOH . C 3 HOH A 34 1334 41 HOH HOH . C 3 HOH A 35 1335 42 HOH HOH . C 3 HOH A 36 1336 43 HOH HOH . C 3 HOH A 37 1337 44 HOH HOH . C 3 HOH A 38 1338 45 HOH HOH . C 3 HOH A 39 1339 46 HOH HOH . C 3 HOH A 40 1340 47 HOH HOH . C 3 HOH A 41 1341 48 HOH HOH . C 3 HOH A 42 1342 49 HOH HOH . C 3 HOH A 43 1343 50 HOH HOH . C 3 HOH A 44 1344 51 HOH HOH . C 3 HOH A 45 1345 52 HOH HOH . C 3 HOH A 46 1346 53 HOH HOH . C 3 HOH A 47 1347 54 HOH HOH . C 3 HOH A 48 1348 55 HOH HOH . C 3 HOH A 49 1349 58 HOH HOH . C 3 HOH A 50 1350 59 HOH HOH . C 3 HOH A 51 1351 62 HOH HOH . C 3 HOH A 52 1352 63 HOH HOH . C 3 HOH A 53 1353 70 HOH HOH . C 3 HOH A 54 1354 73 HOH HOH . C 3 HOH A 55 1355 74 HOH HOH . C 3 HOH A 56 1356 75 HOH HOH . C 3 HOH A 57 1357 76 HOH HOH . C 3 HOH A 58 1358 77 HOH HOH . C 3 HOH A 59 1359 78 HOH HOH . C 3 HOH A 60 1360 79 HOH HOH . C 3 HOH A 61 1361 80 HOH HOH . C 3 HOH A 62 1362 82 HOH HOH . C 3 HOH A 63 1363 83 HOH HOH . C 3 HOH A 64 1364 84 HOH HOH . C 3 HOH A 65 1365 85 HOH HOH . C 3 HOH A 66 1366 87 HOH HOH . C 3 HOH A 67 1367 88 HOH HOH . C 3 HOH A 68 1368 89 HOH HOH . C 3 HOH A 69 1369 91 HOH HOH . C 3 HOH A 70 1370 92 HOH HOH . C 3 HOH A 71 1371 93 HOH HOH . C 3 HOH A 72 1372 95 HOH HOH . C 3 HOH A 73 1373 98 HOH HOH . C 3 HOH A 74 1374 99 HOH HOH . C 3 HOH A 75 1375 100 HOH HOH . C 3 HOH A 76 1376 101 HOH HOH . C 3 HOH A 77 1377 102 HOH HOH . C 3 HOH A 78 1378 103 HOH HOH . C 3 HOH A 79 1379 104 HOH HOH . C 3 HOH A 80 1380 105 HOH HOH . C 3 HOH A 81 1381 106 HOH HOH . C 3 HOH A 82 1382 108 HOH HOH . C 3 HOH A 83 1383 110 HOH HOH . C 3 HOH A 84 1384 111 HOH HOH . C 3 HOH A 85 1385 112 HOH HOH . C 3 HOH A 86 1386 113 HOH HOH . C 3 HOH A 87 1387 114 HOH HOH . C 3 HOH A 88 1388 116 HOH HOH . C 3 HOH A 89 1389 118 HOH HOH . C 3 HOH A 90 1390 120 HOH HOH . C 3 HOH A 91 1391 121 HOH HOH . C 3 HOH A 92 1392 125 HOH HOH . C 3 HOH A 93 1393 126 HOH HOH . C 3 HOH A 94 1394 127 HOH HOH . C 3 HOH A 95 1395 128 HOH HOH . C 3 HOH A 96 1396 129 HOH HOH . C 3 HOH A 97 1397 130 HOH HOH . C 3 HOH A 98 1398 131 HOH HOH . C 3 HOH A 99 1399 132 HOH HOH . C 3 HOH A 100 1400 133 HOH HOH . C 3 HOH A 101 1401 134 HOH HOH . C 3 HOH A 102 1402 135 HOH HOH . C 3 HOH A 103 1403 136 HOH HOH . C 3 HOH A 104 1404 137 HOH HOH . C 3 HOH A 105 1405 138 HOH HOH . C 3 HOH A 106 1406 139 HOH HOH . C 3 HOH A 107 1407 140 HOH HOH . C 3 HOH A 108 1408 141 HOH HOH . C 3 HOH A 109 1409 142 HOH HOH . C 3 HOH A 110 1410 143 HOH HOH . C 3 HOH A 111 1411 144 HOH HOH . C 3 HOH A 112 1412 145 HOH HOH . C 3 HOH A 113 1413 146 HOH HOH . C 3 HOH A 114 1414 147 HOH HOH . C 3 HOH A 115 1415 149 HOH HOH . C 3 HOH A 116 1416 150 HOH HOH . C 3 HOH A 117 1417 154 HOH HOH . C 3 HOH A 118 1418 155 HOH HOH . C 3 HOH A 119 1419 157 HOH HOH . C 3 HOH A 120 1420 158 HOH HOH . C 3 HOH A 121 1421 160 HOH HOH . C 3 HOH A 122 1422 161 HOH HOH . C 3 HOH A 123 1423 162 HOH HOH . C 3 HOH A 124 1424 163 HOH HOH . C 3 HOH A 125 1425 164 HOH HOH . C 3 HOH A 126 1426 166 HOH HOH . C 3 HOH A 127 1427 167 HOH HOH . C 3 HOH A 128 1428 168 HOH HOH . C 3 HOH A 129 1429 169 HOH HOH . C 3 HOH A 130 1430 170 HOH HOH . C 3 HOH A 131 1431 171 HOH HOH . C 3 HOH A 132 1432 172 HOH HOH . C 3 HOH A 133 1433 173 HOH HOH . C 3 HOH A 134 1434 174 HOH HOH . C 3 HOH A 135 1435 176 HOH HOH . C 3 HOH A 136 1436 177 HOH HOH . C 3 HOH A 137 1437 178 HOH HOH . C 3 HOH A 138 1438 179 HOH HOH . C 3 HOH A 139 1439 180 HOH HOH . C 3 HOH A 140 1440 181 HOH HOH . C 3 HOH A 141 1441 182 HOH HOH . C 3 HOH A 142 1442 183 HOH HOH . C 3 HOH A 143 1443 184 HOH HOH . C 3 HOH A 144 1444 185 HOH HOH . C 3 HOH A 145 1445 186 HOH HOH . C 3 HOH A 146 1446 187 HOH HOH . C 3 HOH A 147 1447 188 HOH HOH . C 3 HOH A 148 1448 189 HOH HOH . C 3 HOH A 149 1449 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 2O4 . . . B 2 13.259 37.397 12.039 1 12.87 ? C4 2O4 1201 A 1 HETATM 2 C C14 2O4 . . . B 2 6.215 44.111 15.365 1 18.08 ? C14 2O4 1201 A 1 HETATM 3 C C5 2O4 . . . B 2 13.228 38.764 11.677 1 15.37 ? C5 2O4 1201 A 1 HETATM 4 C C6 2O4 . . . B 2 12.02 39.346 11.295 1 15.51 ? C6 2O4 1201 A 1 HETATM 5 C C11 2O4 . . . B 2 8.353 43.097 11.829 1 15.35 ? C11 2O4 1201 A 1 HETATM 6 C C7 2O4 . . . B 2 10.817 38.626 11.236 1 13.18 ? C7 2O4 1201 A 1 HETATM 7 C C8 2O4 . . . B 2 9.53 39.244 10.831 1 13.31 ? C8 2O4 1201 A 1 HETATM 8 C C9 2O4 . . . B 2 8.327 41.243 10.095 1 15.22 ? C9 2O4 1201 A 1 HETATM 9 C C10 2O4 . . . B 2 7.59 41.82 11.301 1 15.02 ? C10 2O4 1201 A 1 HETATM 10 C C12 2O4 . . . B 2 6.596 44.35 12.976 1 20.2 ? C12 2O4 1201 A 1 HETATM 11 C C13 2O4 . . . B 2 6.346 45.124 14.249 1 20.91 ? C13 2O4 1201 A 1 HETATM 12 N N1 2O4 . . . B 2 9.544 40.54 10.496 1 14.37 ? N1 2O4 1201 A 1 HETATM 13 N N2 2O4 . . . B 2 7.787 43.502 13.083 1 17.02 ? N2 2O4 1201 A 1 HETATM 14 C C3 2O4 . . . B 2 12.077 36.683 11.957 1 11.23 ? C3 2O4 1201 A 1 HETATM 15 N N3 2O4 . . . B 2 9.708 36.462 11.588 1 11.27 ? N3 2O4 1201 A 1 HETATM 16 O O2 2O4 . . . B 2 11.056 33.292 12.443 1 10.62 ? O2 2O4 1201 A 1 HETATM 17 C C2 2O4 . . . B 2 11.018 34.47 12.082 1 10.45 ? C2 2O4 1201 A 1 HETATM 18 N N 2O4 . . . B 2 12.048 35.306 12.368 1 10.39 ? N 2O4 1201 A 1 HETATM 19 C C22 2O4 . . . B 2 10.847 37.266 11.562 1 11.22 ? C22 2O4 1201 A 1 HETATM 20 C C1 2O4 . . . B 2 9.875 35.043 11.285 1 11.27 ? C1 2O4 1201 A 1 HETATM 21 C C 2O4 . . . B 2 8.588 34.292 11.573 1 11.85 ? C 2O4 1201 A 1 HETATM 22 O O1 2O4 . . . B 2 8.451 38.632 10.799 1 15 ? O1 2O4 1201 A 1 HETATM 23 C C20 2O4 . . . B 2 8.121 42.898 14.277 1 15.66 ? C20 2O4 1201 A 1 HETATM 24 C C19 2O4 . . . B 2 9.131 41.991 14.351 1 16.04 ? C19 2O4 1201 A 1 HETATM 25 C C18 2O4 . . . B 2 9.395 41.31 15.56 1 15.68 ? C18 2O4 1201 A 1 HETATM 26 O O 2O4 . . . B 2 10.405 40.465 15.741 1 17.01 ? O 2O4 1201 A 1 HETATM 27 C C21 2O4 . . . B 2 11.279 40.221 14.704 1 16.62 ? C21 2O4 1201 A 1 HETATM 28 C C17 2O4 . . . B 2 8.622 41.541 16.65 1 15.6 ? C17 2O4 1201 A 1 HETATM 29 C C16 2O4 . . . B 2 7.598 42.472 16.575 1 15.76 ? C16 2O4 1201 A 1 HETATM 30 C C15 2O4 . . . B 2 7.331 43.153 15.428 1 15.72 ? C15 2O4 1201 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #