data_4NZG
#
_model_server_result.job_id            YihfdwWaMIUMqI0V_g2sCw 
_model_server_result.datetime_utc      '2024-11-12 21:23:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4nzg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":202}' 
#
_entry.id    4NZG 
#
_exptl.entry_id    4NZG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.7 
_cell.angle_gamma         90 
_cell.entry_id            4NZG 
_cell.length_a            44.659 
_cell.length_b            38.44 
_cell.length_c            135.275 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4NZG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 1 1 
A,C,E,F,G,H,I,O,P,Q,U,W 2 1 
B,D,J,K,L,M,N,R,S,T,V,X 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 P N N 
? 4 Q N N 
? 4 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 52 A HIS 58 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc2 A ND1 HIS 56 A HIS 62 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc3 A SG CYS 89 A CYS 95 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc4 A SG CYS 92 A CYS 98 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc5 B NE2 HIS 52 B HIS 58 1_555 J ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc6 B ND1 HIS 56 B HIS 62 1_555 J ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc7 B SG CYS 89 B CYS 95 1_555 J ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc8 B SG CYS 92 B CYS 98 1_555 J ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc9 C NE2 HIS 52 C HIS 58 1_555 O ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc10 C ND1 HIS 56 C HIS 62 1_555 O ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc11 C SG CYS 89 C CYS 95 1_555 O ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc12 C SG CYS 92 C CYS 98 1_555 O ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc13 D NE2 HIS 52 D HIS 58 1_555 T ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc14 D ND1 HIS 56 D HIS 62 1_555 T ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc15 D SG CYS 89 D CYS 95 1_555 T ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc16 D SG CYS 92 D CYS 98 1_555 T ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,4-DITHIOTHREITOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTT sing 89 n n 
S1 HS1 DTT sing 90 n n 
C1 C2 DTT sing 91 n n 
C1 H11 DTT sing 92 n n 
C1 H12 DTT sing 93 n n 
C2 O2 DTT sing 94 n n 
C2 C3 DTT sing 95 n n 
C2 H2 DTT sing 96 n n 
O2 HO2 DTT sing 97 n n 
C3 O3 DTT sing 98 n n 
C3 C4 DTT sing 99 n n 
C3 H3 DTT sing 100 n n 
O3 HO3 DTT sing 101 n n 
C4 S4 DTT sing 102 n n 
C4 H41 DTT sing 103 n n 
C4 H42 DTT sing 104 n n 
S4 HS2 DTT sing 105 n n 
#
_atom_sites.entry_id                     4NZG 
_atom_sites.fract_transf_matrix[1][1]    0.022392 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000665 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026015 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007396 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 201 201 ZN ZN . 
F 3 ACT A 1 202 7 ACT ACT . 
G 4 DTT A 1 203 2 DTT DTT . 
H 4 DTT A 1 204 6 DTT DTT . 
I 4 DTT A 1 205 11 DTT DTT . 
J 2 ZN B 1 201 201 ZN ZN . 
K 3 ACT B 1 202 6 ACT ACT . 
L 4 DTT B 1 203 1 DTT DTT . 
M 4 DTT B 1 204 3 DTT DTT . 
N 4 DTT B 1 205 7 DTT DTT . 
O 2 ZN C 1 201 201 ZN ZN . 
P 4 DTT C 1 202 5 DTT DTT . 
Q 4 DTT C 1 203 10 DTT DTT . 
R 3 ACT D 1 202 5 ACT ACT . 
S 4 DTT D 1 203 8 DTT DTT . 
T 2 ZN D 1 201 201 ZN ZN . 
U 5 HOH A 1 301 3 HOH HOH . 
U 5 HOH A 2 302 8 HOH HOH . 
U 5 HOH A 3 303 18 HOH HOH . 
U 5 HOH A 4 304 20 HOH HOH . 
U 5 HOH A 5 305 23 HOH HOH . 
U 5 HOH A 6 306 24 HOH HOH . 
U 5 HOH A 7 307 25 HOH HOH . 
U 5 HOH A 8 308 28 HOH HOH . 
U 5 HOH A 9 309 30 HOH HOH . 
U 5 HOH A 10 310 35 HOH HOH . 
U 5 HOH A 11 311 37 HOH HOH . 
U 5 HOH A 12 312 45 HOH HOH . 
U 5 HOH A 13 313 51 HOH HOH . 
U 5 HOH A 14 314 55 HOH HOH . 
V 5 HOH B 1 301 5 HOH HOH . 
V 5 HOH B 2 302 12 HOH HOH . 
V 5 HOH B 3 303 13 HOH HOH . 
V 5 HOH B 4 304 21 HOH HOH . 
V 5 HOH B 5 305 22 HOH HOH . 
V 5 HOH B 6 306 32 HOH HOH . 
V 5 HOH B 7 307 36 HOH HOH . 
V 5 HOH B 8 308 46 HOH HOH . 
V 5 HOH B 9 309 48 HOH HOH . 
V 5 HOH B 10 310 49 HOH HOH . 
V 5 HOH B 11 311 53 HOH HOH . 
V 5 HOH B 12 312 54 HOH HOH . 
W 5 HOH C 1 301 1 HOH HOH . 
W 5 HOH C 2 302 4 HOH HOH . 
W 5 HOH C 3 303 7 HOH HOH . 
W 5 HOH C 4 304 9 HOH HOH . 
W 5 HOH C 5 305 10 HOH HOH . 
W 5 HOH C 6 306 11 HOH HOH . 
W 5 HOH C 7 307 15 HOH HOH . 
W 5 HOH C 8 308 19 HOH HOH . 
W 5 HOH C 9 309 29 HOH HOH . 
W 5 HOH C 10 310 39 HOH HOH . 
W 5 HOH C 11 311 42 HOH HOH . 
W 5 HOH C 12 312 43 HOH HOH . 
W 5 HOH C 13 313 44 HOH HOH . 
W 5 HOH C 14 314 50 HOH HOH . 
X 5 HOH D 1 301 2 HOH HOH . 
X 5 HOH D 2 302 6 HOH HOH . 
X 5 HOH D 3 303 16 HOH HOH . 
X 5 HOH D 4 304 27 HOH HOH . 
X 5 HOH D 5 305 31 HOH HOH . 
X 5 HOH D 6 306 33 HOH HOH . 
X 5 HOH D 7 307 34 HOH HOH . 
X 5 HOH D 8 308 38 HOH HOH . 
X 5 HOH D 9 309 40 HOH HOH . 
X 5 HOH D 10 310 47 HOH HOH . 
X 5 HOH D 11 311 52 HOH HOH . 
X 5 HOH D 12 312 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTT . . . P 4 54.489 6.401 17.335 1 92.99 ? S1 DTT 202 C 1 
HETATM 2 C C1 DTT . . . P 4 53.571 4.878 16.996 1 85.3 ? C1 DTT 202 C 1 
HETATM 3 C C2 DTT . . . P 4 52.079 5.048 17.262 1 85.68 ? C2 DTT 202 C 1 
HETATM 4 O O2 DTT . . . P 4 51.863 5.27 18.637 1 87.79 ? O2 DTT 202 C 1 
HETATM 5 C C3 DTT . . . P 4 51.27 3.843 16.799 1 85.93 ? C3 DTT 202 C 1 
HETATM 6 O O3 DTT . . . P 4 51.48 3.637 15.419 1 88.7 ? O3 DTT 202 C 1 
HETATM 7 C C4 DTT . . . P 4 51.664 2.595 17.579 1 83.42 ? C4 DTT 202 C 1 
HETATM 8 S S4 DTT . . . P 4 50.881 1.097 16.932 1 92.57 ? S4 DTT 202 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#