data_4O04 # _model_server_result.job_id t5KlJB75G60Y5LgbCT3RdA _model_server_result.datetime_utc '2024-11-22 09:45:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o04 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":4000}' # _entry.id 4O04 # _exptl.entry_id 4O04 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.442 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(2,7,7-trimethyl-5-oxo-1,2,3,4,5,6,7,8-octahydro-9H-beta-carbolin-9-yl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O04 _cell.length_a 67.19 _cell.length_b 90.92 _cell.length_c 99.06 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O04 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H25 N3 O2' _chem_comp.formula_weight 351.442 _chem_comp.id 2Q8 _chem_comp.mon_nstd_flag . _chem_comp.name 4-(2,7,7-trimethyl-5-oxo-1,2,3,4,5,6,7,8-octahydro-9H-beta-carbolin-9-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 2Q8 sing 1 n n O C13 2Q8 doub 2 n n C20 C1 2Q8 sing 3 n n C1 C2 2Q8 sing 4 n n C1 C19 2Q8 sing 5 n n C11 C12 2Q8 doub 6 n y C11 C10 2Q8 sing 7 n y C12 C7 2Q8 sing 8 n y C13 C10 2Q8 sing 9 n n C13 N1 2Q8 sing 10 n n C2 C3 2Q8 sing 11 n n C10 C9 2Q8 doub 12 n y C19 C18 2Q8 sing 13 n n C7 N 2Q8 sing 14 n n C7 C8 2Q8 doub 15 n y C3 N 2Q8 sing 16 n y C3 C4 2Q8 doub 17 n y C18 O1 2Q8 doub 18 n n C18 C4 2Q8 sing 19 n n N C6 2Q8 sing 20 n y C4 C5 2Q8 sing 21 n y C9 C8 2Q8 sing 22 n y C6 C5 2Q8 doub 23 n y C6 C14 2Q8 sing 24 n n C5 C16 2Q8 sing 25 n n C14 N2 2Q8 sing 26 n n C15 C16 2Q8 sing 27 n n C15 N2 2Q8 sing 28 n n N2 C17 2Q8 sing 29 n n C19 H1 2Q8 sing 30 n n C19 H2 2Q8 sing 31 n n C20 H3 2Q8 sing 32 n n C20 H4 2Q8 sing 33 n n C20 H5 2Q8 sing 34 n n C H6 2Q8 sing 35 n n C H7 2Q8 sing 36 n n C H8 2Q8 sing 37 n n C16 H9 2Q8 sing 38 n n C16 H10 2Q8 sing 39 n n C15 H11 2Q8 sing 40 n n C15 H12 2Q8 sing 41 n n C17 H14 2Q8 sing 42 n n C17 H15 2Q8 sing 43 n n C17 H16 2Q8 sing 44 n n C14 H17 2Q8 sing 45 n n C14 H18 2Q8 sing 46 n n C2 H19 2Q8 sing 47 n n C2 H20 2Q8 sing 48 n n C12 H21 2Q8 sing 49 n n C11 H22 2Q8 sing 50 n n N1 H23 2Q8 sing 51 n n N1 H24 2Q8 sing 52 n n C9 H25 2Q8 sing 53 n n C8 H26 2Q8 sing 54 n n # _atom_sites.entry_id 4O04 _atom_sites.fract_transf_matrix[1][1] 0.014883 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010999 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010095 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2Q8 A 1 4000 4000 2Q8 2Q8 . C 3 HOH A 1 4101 4101 HOH HOH . C 3 HOH A 2 4102 4102 HOH HOH . C 3 HOH A 3 4103 4103 HOH HOH . C 3 HOH A 4 4104 4104 HOH HOH . C 3 HOH A 5 4105 4105 HOH HOH . C 3 HOH A 6 4106 4106 HOH HOH . C 3 HOH A 7 4107 4107 HOH HOH . C 3 HOH A 8 4108 4108 HOH HOH . C 3 HOH A 9 4109 4109 HOH HOH . C 3 HOH A 10 4110 4110 HOH HOH . C 3 HOH A 11 4111 4111 HOH HOH . C 3 HOH A 12 4112 4112 HOH HOH . C 3 HOH A 13 4113 4113 HOH HOH . C 3 HOH A 14 4114 4114 HOH HOH . C 3 HOH A 15 4115 4115 HOH HOH . C 3 HOH A 16 4116 4116 HOH HOH . C 3 HOH A 17 4117 4117 HOH HOH . C 3 HOH A 18 4118 4118 HOH HOH . C 3 HOH A 19 4119 4119 HOH HOH . C 3 HOH A 20 4120 4120 HOH HOH . C 3 HOH A 21 4121 4121 HOH HOH . C 3 HOH A 22 4122 4122 HOH HOH . C 3 HOH A 23 4123 4123 HOH HOH . C 3 HOH A 24 4124 4124 HOH HOH . C 3 HOH A 25 4125 4125 HOH HOH . C 3 HOH A 26 4126 4126 HOH HOH . C 3 HOH A 27 4127 4127 HOH HOH . C 3 HOH A 28 4128 4128 HOH HOH . C 3 HOH A 29 4129 4129 HOH HOH . C 3 HOH A 30 4130 4130 HOH HOH . C 3 HOH A 31 4131 4131 HOH HOH . C 3 HOH A 32 4132 4132 HOH HOH . C 3 HOH A 33 4133 4133 HOH HOH . C 3 HOH A 34 4134 4134 HOH HOH . C 3 HOH A 35 4135 4135 HOH HOH . C 3 HOH A 36 4136 4136 HOH HOH . C 3 HOH A 37 4137 4137 HOH HOH . C 3 HOH A 38 4138 4138 HOH HOH . C 3 HOH A 39 4139 4139 HOH HOH . C 3 HOH A 40 4140 4140 HOH HOH . C 3 HOH A 41 4141 4141 HOH HOH . C 3 HOH A 42 4142 4142 HOH HOH . C 3 HOH A 43 4143 4143 HOH HOH . C 3 HOH A 44 4144 4144 HOH HOH . C 3 HOH A 45 4145 4145 HOH HOH . C 3 HOH A 46 4146 4146 HOH HOH . C 3 HOH A 47 4147 4147 HOH HOH . C 3 HOH A 48 4148 4148 HOH HOH . C 3 HOH A 49 4149 4149 HOH HOH . C 3 HOH A 50 4150 4150 HOH HOH . C 3 HOH A 51 4151 4151 HOH HOH . C 3 HOH A 52 4152 4152 HOH HOH . C 3 HOH A 53 4153 4153 HOH HOH . C 3 HOH A 54 4154 4154 HOH HOH . C 3 HOH A 55 4155 4155 HOH HOH . C 3 HOH A 56 4156 4156 HOH HOH . C 3 HOH A 57 4157 4157 HOH HOH . C 3 HOH A 58 4158 4158 HOH HOH . C 3 HOH A 59 4159 4159 HOH HOH . C 3 HOH A 60 4160 4160 HOH HOH . C 3 HOH A 61 4161 4161 HOH HOH . C 3 HOH A 62 4162 4162 HOH HOH . C 3 HOH A 63 4163 4163 HOH HOH . C 3 HOH A 64 4164 4164 HOH HOH . C 3 HOH A 65 4165 4165 HOH HOH . C 3 HOH A 66 4166 4166 HOH HOH . C 3 HOH A 67 4167 4167 HOH HOH . C 3 HOH A 68 4168 4168 HOH HOH . C 3 HOH A 69 4169 4169 HOH HOH . C 3 HOH A 70 4170 4170 HOH HOH . C 3 HOH A 71 4171 4171 HOH HOH . C 3 HOH A 72 4172 4172 HOH HOH . C 3 HOH A 73 4173 4173 HOH HOH . C 3 HOH A 74 4174 4174 HOH HOH . C 3 HOH A 75 4175 4175 HOH HOH . C 3 HOH A 76 4176 4176 HOH HOH . C 3 HOH A 77 4177 4177 HOH HOH . C 3 HOH A 78 4178 4178 HOH HOH . C 3 HOH A 79 4179 4179 HOH HOH . C 3 HOH A 80 4180 4180 HOH HOH . C 3 HOH A 81 4181 4181 HOH HOH . C 3 HOH A 82 4182 4182 HOH HOH . C 3 HOH A 83 4183 4183 HOH HOH . C 3 HOH A 84 4184 4184 HOH HOH . C 3 HOH A 85 4185 4185 HOH HOH . C 3 HOH A 86 4186 4186 HOH HOH . C 3 HOH A 87 4187 4187 HOH HOH . C 3 HOH A 88 4188 4188 HOH HOH . C 3 HOH A 89 4189 4189 HOH HOH . C 3 HOH A 90 4190 4190 HOH HOH . C 3 HOH A 91 4191 4191 HOH HOH . C 3 HOH A 92 4192 4192 HOH HOH . C 3 HOH A 93 4193 4193 HOH HOH . C 3 HOH A 94 4194 4194 HOH HOH . C 3 HOH A 95 4195 4195 HOH HOH . C 3 HOH A 96 4196 4196 HOH HOH . C 3 HOH A 97 4197 4197 HOH HOH . C 3 HOH A 98 4198 4198 HOH HOH . C 3 HOH A 99 4199 4199 HOH HOH . C 3 HOH A 100 4200 4200 HOH HOH . C 3 HOH A 101 4201 4201 HOH HOH . C 3 HOH A 102 4202 4202 HOH HOH . C 3 HOH A 103 4203 4203 HOH HOH . C 3 HOH A 104 4204 4204 HOH HOH . C 3 HOH A 105 4205 4205 HOH HOH . C 3 HOH A 106 4206 4206 HOH HOH . C 3 HOH A 107 4207 4207 HOH HOH . C 3 HOH A 108 4208 4208 HOH HOH . C 3 HOH A 109 4209 4209 HOH HOH . C 3 HOH A 110 4210 4210 HOH HOH . C 3 HOH A 111 4211 4211 HOH HOH . C 3 HOH A 112 4212 4212 HOH HOH . C 3 HOH A 113 4213 4213 HOH HOH . C 3 HOH A 114 4214 4214 HOH HOH . C 3 HOH A 115 4215 4215 HOH HOH . C 3 HOH A 116 4216 4216 HOH HOH . C 3 HOH A 117 4217 4217 HOH HOH . C 3 HOH A 118 4218 4218 HOH HOH . C 3 HOH A 119 4219 4219 HOH HOH . C 3 HOH A 120 4220 4220 HOH HOH . C 3 HOH A 121 4221 4221 HOH HOH . C 3 HOH A 122 4222 4222 HOH HOH . C 3 HOH A 123 4223 4223 HOH HOH . C 3 HOH A 124 4224 4224 HOH HOH . C 3 HOH A 125 4225 4225 HOH HOH . C 3 HOH A 126 4226 4226 HOH HOH . C 3 HOH A 127 4227 4227 HOH HOH . C 3 HOH A 128 4228 4228 HOH HOH . C 3 HOH A 129 4229 4229 HOH HOH . C 3 HOH A 130 4230 4230 HOH HOH . C 3 HOH A 131 4231 4231 HOH HOH . C 3 HOH A 132 4232 4232 HOH HOH . C 3 HOH A 133 4233 4233 HOH HOH . C 3 HOH A 134 4234 4234 HOH HOH . C 3 HOH A 135 4235 4235 HOH HOH . C 3 HOH A 136 4236 4236 HOH HOH . C 3 HOH A 137 4237 4237 HOH HOH . C 3 HOH A 138 4238 4238 HOH HOH . C 3 HOH A 139 4239 4239 HOH HOH . C 3 HOH A 140 4240 4240 HOH HOH . C 3 HOH A 141 4241 4241 HOH HOH . C 3 HOH A 142 4242 4242 HOH HOH . C 3 HOH A 143 4243 4243 HOH HOH . C 3 HOH A 144 4244 4244 HOH HOH . C 3 HOH A 145 4245 4245 HOH HOH . C 3 HOH A 146 4246 4246 HOH HOH . C 3 HOH A 147 4247 4247 HOH HOH . C 3 HOH A 148 4248 4248 HOH HOH . C 3 HOH A 149 4249 4249 HOH HOH . C 3 HOH A 150 4250 4250 HOH HOH . C 3 HOH A 151 4251 4251 HOH HOH . C 3 HOH A 152 4252 4252 HOH HOH . C 3 HOH A 153 4253 4253 HOH HOH . C 3 HOH A 154 4254 4254 HOH HOH . C 3 HOH A 155 4255 4255 HOH HOH . C 3 HOH A 156 4256 4256 HOH HOH . C 3 HOH A 157 4257 4257 HOH HOH . C 3 HOH A 158 4258 4258 HOH HOH . C 3 HOH A 159 4259 4259 HOH HOH . C 3 HOH A 160 4260 4260 HOH HOH . C 3 HOH A 161 4261 4261 HOH HOH . C 3 HOH A 162 4262 4262 HOH HOH . C 3 HOH A 163 4263 4263 HOH HOH . C 3 HOH A 164 4264 4264 HOH HOH . C 3 HOH A 165 4265 4265 HOH HOH . C 3 HOH A 166 4266 4266 HOH HOH . C 3 HOH A 167 4267 4267 HOH HOH . C 3 HOH A 168 4268 4268 HOH HOH . C 3 HOH A 169 4269 4269 HOH HOH . C 3 HOH A 170 4270 4270 HOH HOH . C 3 HOH A 171 4271 4271 HOH HOH . C 3 HOH A 172 4272 4272 HOH HOH . C 3 HOH A 173 4273 4273 HOH HOH . C 3 HOH A 174 4274 4274 HOH HOH . C 3 HOH A 175 4275 4275 HOH HOH . C 3 HOH A 176 4276 4276 HOH HOH . C 3 HOH A 177 4277 4277 HOH HOH . C 3 HOH A 178 4278 4278 HOH HOH . C 3 HOH A 179 4279 4279 HOH HOH . C 3 HOH A 180 4280 4280 HOH HOH . C 3 HOH A 181 4281 4281 HOH HOH . C 3 HOH A 182 4282 4282 HOH HOH . C 3 HOH A 183 4283 4283 HOH HOH . C 3 HOH A 184 4284 4284 HOH HOH . C 3 HOH A 185 4285 4285 HOH HOH . C 3 HOH A 186 4286 4286 HOH HOH . C 3 HOH A 187 4287 4287 HOH HOH . C 3 HOH A 188 4288 4288 HOH HOH . C 3 HOH A 189 4289 4289 HOH HOH . C 3 HOH A 190 4290 4290 HOH HOH . C 3 HOH A 191 4291 4291 HOH HOH . C 3 HOH A 192 4292 4292 HOH HOH . C 3 HOH A 193 4293 4293 HOH HOH . C 3 HOH A 194 4294 4294 HOH HOH . C 3 HOH A 195 4295 4295 HOH HOH . C 3 HOH A 196 4296 4296 HOH HOH . C 3 HOH A 197 4297 4297 HOH HOH . C 3 HOH A 198 4298 4298 HOH HOH . C 3 HOH A 199 4299 4299 HOH HOH . C 3 HOH A 200 4300 4300 HOH HOH . C 3 HOH A 201 4301 4301 HOH HOH . C 3 HOH A 202 4302 4302 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2Q8 . . . B 2 8.676 -12.362 -24.21 1 17.32 ? O1 2Q8 4000 A 1 HETATM 2 C C18 2Q8 . . . B 2 7.505 -12.711 -24.304 1 15.65 ? C18 2Q8 4000 A 1 HETATM 3 C C19 2Q8 . . . B 2 7.167 -14.138 -24.677 1 14.04 ? C19 2Q8 4000 A 1 HETATM 4 C C1 2Q8 . . . B 2 5.901 -14.315 -25.532 1 14.5 ? C1 2Q8 4000 A 1 HETATM 5 C C20 2Q8 . . . B 2 5.549 -15.797 -25.64 1 14.68 ? C20 2Q8 4000 A 1 HETATM 6 C C 2Q8 . . . B 2 6.138 -13.762 -26.942 1 13.7 ? C 2Q8 4000 A 1 HETATM 7 C C4 2Q8 . . . B 2 6.39 -11.762 -24.105 1 14.85 ? C4 2Q8 4000 A 1 HETATM 8 C C5 2Q8 . . . B 2 6.296 -10.369 -23.739 1 15.13 ? C5 2Q8 4000 A 1 HETATM 9 C C16 2Q8 . . . B 2 7.431 -9.433 -23.399 1 15.49 ? C16 2Q8 4000 A 1 HETATM 10 C C15 2Q8 . . . B 2 6.913 -7.995 -23.439 1 16.57 ? C15 2Q8 4000 A 1 HETATM 11 N N2 2Q8 . . . B 2 5.611 -7.811 -22.799 1 17.02 ? N2 2Q8 4000 A 1 HETATM 12 C C17 2Q8 . . . B 2 5.238 -6.389 -22.771 1 18.37 ? C17 2Q8 4000 A 1 HETATM 13 C C14 2Q8 . . . B 2 4.58 -8.598 -23.471 1 16.4 ? C14 2Q8 4000 A 1 HETATM 14 C C6 2Q8 . . . B 2 4.97 -10.008 -23.788 1 15.21 ? C6 2Q8 4000 A 1 HETATM 15 N N 2Q8 . . . B 2 4.239 -11.118 -24.176 1 14.4 ? N 2Q8 4000 A 1 HETATM 16 C C3 2Q8 . . . B 2 5.102 -12.192 -24.374 1 14.6 ? C3 2Q8 4000 A 1 HETATM 17 C C2 2Q8 . . . B 2 4.745 -13.567 -24.855 1 14.66 ? C2 2Q8 4000 A 1 HETATM 18 C C7 2Q8 . . . B 2 2.81 -11.125 -24.394 1 13.65 ? C7 2Q8 4000 A 1 HETATM 19 C C12 2Q8 . . . B 2 2.228 -10.174 -25.238 1 13.57 ? C12 2Q8 4000 A 1 HETATM 20 C C11 2Q8 . . . B 2 0.859 -10.183 -25.452 1 13.68 ? C11 2Q8 4000 A 1 HETATM 21 C C10 2Q8 . . . B 2 0.046 -11.146 -24.849 1 13.4 ? C10 2Q8 4000 A 1 HETATM 22 C C13 2Q8 . . . B 2 -1.43 -11.155 -25.155 1 13.44 ? C13 2Q8 4000 A 1 HETATM 23 N N1 2Q8 . . . B 2 -2.248 -11.724 -24.276 1 12.92 ? N1 2Q8 4000 A 1 HETATM 24 O O 2Q8 . . . B 2 -1.832 -10.65 -26.205 1 13.83 ? O 2Q8 4000 A 1 HETATM 25 C C9 2Q8 . . . B 2 0.633 -12.095 -24.008 1 13.61 ? C9 2Q8 4000 A 1 HETATM 26 C C8 2Q8 . . . B 2 2.002 -12.086 -23.772 1 12.81 ? C8 2Q8 4000 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #