data_4O0H
#
_model_server_result.job_id            oRLfZmVwJJCez3Iqe83HQg 
_model_server_result.datetime_utc      '2024-11-28 14:59:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4o0h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    4O0H 
#
_exptl.entry_id    4O0H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4O0H 
_cell.length_a            59.651 
_cell.length_b            59.651 
_cell.length_c            298.517 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4O0H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG1 THR 169 A THR 168 1_555 C CG IAS . A IAS 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.48 ? 
covale ? covale2 B OG1 THR 169 B THR 168 1_555 E CG IAS . B IAS 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 ? 
metalc ? metalc1 A O LEU 56 A LEU 55 1_555 D NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc2 A O ASP 59 A ASP 58 1_555 D NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc3 A O PHE 62 A PHE 61 1_555 D NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc4 A O ALA 64 A ALA 63 1_555 D NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc5 A O CYS 66 A CYS 65 1_555 D NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc6 B O LEU 56 B LEU 55 1_555 F NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc7 B O GLU 57 B GLU 56 1_555 F NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc8 B O ASP 59 B ASP 58 1_555 F NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc9 B O PHE 62 B PHE 61 1_555 F NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc10 B O ALA 64 B ALA 63 1_555 F NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc11 B O CYS 66 B CYS 65 1_555 F NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4O0H 
_atom_sites.fract_transf_matrix[1][1]    0.016764 
_atom_sites.fract_transf_matrix[1][2]    0.009679 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019358 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IAS A 1 401 168 IAS THN . 
D 3 NA A 1 402 1 NA NA . 
E 2 IAS B 1 401 168 IAS THN . 
F 3 NA B 1 402 2 NA NA . 
G 4 HOH A 1 501 2 HOH HOH . 
G 4 HOH A 2 502 3 HOH HOH . 
G 4 HOH A 3 503 5 HOH HOH . 
G 4 HOH A 4 504 6 HOH HOH . 
G 4 HOH A 5 505 7 HOH HOH . 
G 4 HOH A 6 506 9 HOH HOH . 
G 4 HOH A 7 507 10 HOH HOH . 
G 4 HOH A 8 508 11 HOH HOH . 
G 4 HOH A 9 509 12 HOH HOH . 
G 4 HOH A 10 510 13 HOH HOH . 
G 4 HOH A 11 511 16 HOH HOH . 
G 4 HOH A 12 512 19 HOH HOH . 
G 4 HOH A 13 513 20 HOH HOH . 
G 4 HOH A 14 514 22 HOH HOH . 
G 4 HOH A 15 515 23 HOH HOH . 
G 4 HOH A 16 516 27 HOH HOH . 
G 4 HOH A 17 517 28 HOH HOH . 
G 4 HOH A 18 518 30 HOH HOH . 
G 4 HOH A 19 519 31 HOH HOH . 
G 4 HOH A 20 520 33 HOH HOH . 
G 4 HOH A 21 521 36 HOH HOH . 
G 4 HOH A 22 522 40 HOH HOH . 
G 4 HOH A 23 523 42 HOH HOH . 
G 4 HOH A 24 524 44 HOH HOH . 
G 4 HOH A 25 525 48 HOH HOH . 
G 4 HOH A 26 526 49 HOH HOH . 
G 4 HOH A 27 527 51 HOH HOH . 
G 4 HOH A 28 528 52 HOH HOH . 
G 4 HOH A 29 529 53 HOH HOH . 
G 4 HOH A 30 530 54 HOH HOH . 
G 4 HOH A 31 531 62 HOH HOH . 
G 4 HOH A 32 532 64 HOH HOH . 
G 4 HOH A 33 533 66 HOH HOH . 
G 4 HOH A 34 534 67 HOH HOH . 
G 4 HOH A 35 535 71 HOH HOH . 
G 4 HOH A 36 536 75 HOH HOH . 
G 4 HOH A 37 537 78 HOH HOH . 
G 4 HOH A 38 538 79 HOH HOH . 
G 4 HOH A 39 539 80 HOH HOH . 
G 4 HOH A 40 540 81 HOH HOH . 
G 4 HOH A 41 541 87 HOH HOH . 
G 4 HOH A 42 542 89 HOH HOH . 
G 4 HOH A 43 543 90 HOH HOH . 
G 4 HOH A 44 544 91 HOH HOH . 
G 4 HOH A 45 545 92 HOH HOH . 
G 4 HOH A 46 546 93 HOH HOH . 
G 4 HOH A 47 547 95 HOH HOH . 
G 4 HOH A 48 548 96 HOH HOH . 
G 4 HOH A 49 549 98 HOH HOH . 
G 4 HOH A 50 550 100 HOH HOH . 
G 4 HOH A 51 551 104 HOH HOH . 
G 4 HOH A 52 552 108 HOH HOH . 
G 4 HOH A 53 553 110 HOH HOH . 
G 4 HOH A 54 554 111 HOH HOH . 
G 4 HOH A 55 555 114 HOH HOH . 
G 4 HOH A 56 556 117 HOH HOH . 
G 4 HOH A 57 557 118 HOH HOH . 
G 4 HOH A 58 558 121 HOH HOH . 
G 4 HOH A 59 559 130 HOH HOH . 
G 4 HOH A 60 560 132 HOH HOH . 
G 4 HOH A 61 561 133 HOH HOH . 
G 4 HOH A 62 562 139 HOH HOH . 
G 4 HOH A 63 563 140 HOH HOH . 
G 4 HOH A 64 564 143 HOH HOH . 
G 4 HOH A 65 565 144 HOH HOH . 
G 4 HOH A 66 566 145 HOH HOH . 
G 4 HOH A 67 567 146 HOH HOH . 
G 4 HOH A 68 568 147 HOH HOH . 
G 4 HOH A 69 569 149 HOH HOH . 
G 4 HOH A 70 570 151 HOH HOH . 
G 4 HOH A 71 571 156 HOH HOH . 
G 4 HOH A 72 572 157 HOH HOH . 
G 4 HOH A 73 573 161 HOH HOH . 
G 4 HOH A 74 574 162 HOH HOH . 
G 4 HOH A 75 575 163 HOH HOH . 
G 4 HOH A 76 576 165 HOH HOH . 
G 4 HOH A 77 577 167 HOH HOH . 
G 4 HOH A 78 578 169 HOH HOH . 
G 4 HOH A 79 579 171 HOH HOH . 
G 4 HOH A 80 580 172 HOH HOH . 
G 4 HOH A 81 581 173 HOH HOH . 
G 4 HOH A 82 582 174 HOH HOH . 
G 4 HOH A 83 583 175 HOH HOH . 
G 4 HOH A 84 584 180 HOH HOH . 
G 4 HOH A 85 585 181 HOH HOH . 
G 4 HOH A 86 586 182 HOH HOH . 
G 4 HOH A 87 587 183 HOH HOH . 
G 4 HOH A 88 588 184 HOH HOH . 
G 4 HOH A 89 589 191 HOH HOH . 
H 4 HOH B 1 501 1 HOH HOH . 
H 4 HOH B 2 502 4 HOH HOH . 
H 4 HOH B 3 503 8 HOH HOH . 
H 4 HOH B 4 504 14 HOH HOH . 
H 4 HOH B 5 505 15 HOH HOH . 
H 4 HOH B 6 506 17 HOH HOH . 
H 4 HOH B 7 507 18 HOH HOH . 
H 4 HOH B 8 508 21 HOH HOH . 
H 4 HOH B 9 509 24 HOH HOH . 
H 4 HOH B 10 510 25 HOH HOH . 
H 4 HOH B 11 511 26 HOH HOH . 
H 4 HOH B 12 512 29 HOH HOH . 
H 4 HOH B 13 513 32 HOH HOH . 
H 4 HOH B 14 514 34 HOH HOH . 
H 4 HOH B 15 515 35 HOH HOH . 
H 4 HOH B 16 516 37 HOH HOH . 
H 4 HOH B 17 517 38 HOH HOH . 
H 4 HOH B 18 518 39 HOH HOH . 
H 4 HOH B 19 519 41 HOH HOH . 
H 4 HOH B 20 520 43 HOH HOH . 
H 4 HOH B 21 521 45 HOH HOH . 
H 4 HOH B 22 522 46 HOH HOH . 
H 4 HOH B 23 523 47 HOH HOH . 
H 4 HOH B 24 524 50 HOH HOH . 
H 4 HOH B 25 525 55 HOH HOH . 
H 4 HOH B 26 526 56 HOH HOH . 
H 4 HOH B 27 527 57 HOH HOH . 
H 4 HOH B 28 528 58 HOH HOH . 
H 4 HOH B 29 529 59 HOH HOH . 
H 4 HOH B 30 530 60 HOH HOH . 
H 4 HOH B 31 531 61 HOH HOH . 
H 4 HOH B 32 532 63 HOH HOH . 
H 4 HOH B 33 533 65 HOH HOH . 
H 4 HOH B 34 534 68 HOH HOH . 
H 4 HOH B 35 535 69 HOH HOH . 
H 4 HOH B 36 536 70 HOH HOH . 
H 4 HOH B 37 537 72 HOH HOH . 
H 4 HOH B 38 538 73 HOH HOH . 
H 4 HOH B 39 539 74 HOH HOH . 
H 4 HOH B 40 540 76 HOH HOH . 
H 4 HOH B 41 541 77 HOH HOH . 
H 4 HOH B 42 542 82 HOH HOH . 
H 4 HOH B 43 543 83 HOH HOH . 
H 4 HOH B 44 544 84 HOH HOH . 
H 4 HOH B 45 545 85 HOH HOH . 
H 4 HOH B 46 546 86 HOH HOH . 
H 4 HOH B 47 547 88 HOH HOH . 
H 4 HOH B 48 548 94 HOH HOH . 
H 4 HOH B 49 549 97 HOH HOH . 
H 4 HOH B 50 550 99 HOH HOH . 
H 4 HOH B 51 551 101 HOH HOH . 
H 4 HOH B 52 552 102 HOH HOH . 
H 4 HOH B 53 553 103 HOH HOH . 
H 4 HOH B 54 554 105 HOH HOH . 
H 4 HOH B 55 555 106 HOH HOH . 
H 4 HOH B 56 556 107 HOH HOH . 
H 4 HOH B 57 557 109 HOH HOH . 
H 4 HOH B 58 558 112 HOH HOH . 
H 4 HOH B 59 559 113 HOH HOH . 
H 4 HOH B 60 560 115 HOH HOH . 
H 4 HOH B 61 561 116 HOH HOH . 
H 4 HOH B 62 562 119 HOH HOH . 
H 4 HOH B 63 563 120 HOH HOH . 
H 4 HOH B 64 564 122 HOH HOH . 
H 4 HOH B 65 565 123 HOH HOH . 
H 4 HOH B 66 566 124 HOH HOH . 
H 4 HOH B 67 567 125 HOH HOH . 
H 4 HOH B 68 568 126 HOH HOH . 
H 4 HOH B 69 569 127 HOH HOH . 
H 4 HOH B 70 570 128 HOH HOH . 
H 4 HOH B 71 571 129 HOH HOH . 
H 4 HOH B 72 572 131 HOH HOH . 
H 4 HOH B 73 573 134 HOH HOH . 
H 4 HOH B 74 574 135 HOH HOH . 
H 4 HOH B 75 575 136 HOH HOH . 
H 4 HOH B 76 576 137 HOH HOH . 
H 4 HOH B 77 577 138 HOH HOH . 
H 4 HOH B 78 578 141 HOH HOH . 
H 4 HOH B 79 579 142 HOH HOH . 
H 4 HOH B 80 580 148 HOH HOH . 
H 4 HOH B 81 581 150 HOH HOH . 
H 4 HOH B 82 582 152 HOH HOH . 
H 4 HOH B 83 583 153 HOH HOH . 
H 4 HOH B 84 584 154 HOH HOH . 
H 4 HOH B 85 585 155 HOH HOH . 
H 4 HOH B 86 586 158 HOH HOH . 
H 4 HOH B 87 587 159 HOH HOH . 
H 4 HOH B 88 588 160 HOH HOH . 
H 4 HOH B 89 589 164 HOH HOH . 
H 4 HOH B 90 590 166 HOH HOH . 
H 4 HOH B 91 591 168 HOH HOH . 
H 4 HOH B 92 592 170 HOH HOH . 
H 4 HOH B 93 593 176 HOH HOH . 
H 4 HOH B 94 594 177 HOH HOH . 
H 4 HOH B 95 595 178 HOH HOH . 
H 4 HOH B 96 596 179 HOH HOH . 
H 4 HOH B 97 597 185 HOH HOH . 
H 4 HOH B 98 598 186 HOH HOH . 
H 4 HOH B 99 599 187 HOH HOH . 
H 4 HOH B 100 600 188 HOH HOH . 
H 4 HOH B 101 601 189 HOH HOH . 
H 4 HOH B 102 602 190 HOH HOH . 
H 4 HOH B 103 603 192 HOH HOH . 
H 4 HOH B 104 604 193 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -9.199 
_atom_site.Cartn_y               -16.385 
_atom_site.Cartn_z               5.287 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.85 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#