data_4O0J # _model_server_result.job_id KPEmhsXlu8wfrcB5GTKdrQ _model_server_result.datetime_utc '2025-01-11 06:12:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o0j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4O0J # _exptl.entry_id 4O0J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 451.985 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-tert-butoxy[4-(4-chlorophenyl)-6-(3,4-dimethylphenyl)-2,5-dimethylpyridin-3-yl]ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4O0J _cell.length_a 72.223 _cell.length_b 72.223 _cell.length_c 65.227 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O0J _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 43.484667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 15 A ASP 64 1_555 A N CAF 16 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale2 A C CAF 16 A CAF 65 1_555 A N THR 17 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.516 ? covale ? covale3 A C ALA 80 A ALA 129 1_555 A N CAF 81 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.527 ? covale ? covale4 A C CAF 81 A CAF 130 1_555 A N TRP 82 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? # _chem_comp.formula 'C27 H30 Cl N O3' _chem_comp.formula_weight 451.985 _chem_comp.id LF8 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-tert-butoxy[4-(4-chlorophenyl)-6-(3,4-dimethylphenyl)-2,5-dimethylpyridin-3-yl]ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C27 LF8 sing 216 n n C29 C27 LF8 sing 217 n n C27 C30 LF8 sing 218 n n C27 O26 LF8 sing 219 n n C18 C17 LF8 doub 220 n y C18 C19 LF8 sing 221 n y C17 C16 LF8 sing 222 n y C12 C11 LF8 doub 223 n y C12 C7 LF8 sing 224 n y O26 C24 LF8 sing 225 n n C11 C10 LF8 sing 226 n y C22 C19 LF8 sing 227 n n C19 C20 LF8 doub 228 n y C16 C2 LF8 sing 229 n n C16 C21 LF8 doub 230 n y N1 C2 LF8 doub 231 n y N1 C6 LF8 sing 232 n y C15 C6 LF8 sing 233 n n C2 C3 LF8 sing 234 n y C6 C5 LF8 doub 235 n y C5 C4 LF8 sing 236 n y C5 C24 LF8 sing 237 n n C3 C14 LF8 sing 238 n n C3 C4 LF8 doub 239 n y C4 C7 LF8 sing 240 n n C24 C25 LF8 sing 241 n n C7 C8 LF8 doub 242 n y C21 C20 LF8 sing 243 n y C20 C23 LF8 sing 244 n n C10 CL LF8 sing 245 n n C10 C9 LF8 doub 246 n y C25 O33 LF8 doub 247 n n C25 O34 LF8 sing 248 n n C8 C9 LF8 sing 249 n y C8 H1 LF8 sing 250 n n C9 H2 LF8 sing 251 n n C11 H3 LF8 sing 252 n n C12 H4 LF8 sing 253 n n C14 H5 LF8 sing 254 n n C14 H6 LF8 sing 255 n n C14 H7 LF8 sing 256 n n C15 H8 LF8 sing 257 n n C15 H9 LF8 sing 258 n n C15 H10 LF8 sing 259 n n C17 H11 LF8 sing 260 n n C18 H12 LF8 sing 261 n n C21 H13 LF8 sing 262 n n C22 H14 LF8 sing 263 n n C22 H15 LF8 sing 264 n n C22 H16 LF8 sing 265 n n C23 H17 LF8 sing 266 n n C23 H18 LF8 sing 267 n n C23 H19 LF8 sing 268 n n C24 H20 LF8 sing 269 n n C28 H21 LF8 sing 270 n n C28 H22 LF8 sing 271 n n C28 H23 LF8 sing 272 n n C29 H24 LF8 sing 273 n n C29 H25 LF8 sing 274 n n C29 H26 LF8 sing 275 n n C30 H27 LF8 sing 276 n n C30 H28 LF8 sing 277 n n C30 H29 LF8 sing 278 n n O34 H30 LF8 sing 279 n n # _atom_sites.entry_id 4O0J _atom_sites.fract_transf_matrix[1][1] 0.013846 _atom_sites.fract_transf_matrix[1][2] 0.007994 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015988 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LF8 A 1 301 1 LF8 LF8 . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 3 SO4 A 1 304 3 SO4 SO4 . F 4 HOH A 1 401 1 HOH HOH . F 4 HOH A 2 402 2 HOH HOH . F 4 HOH A 3 403 3 HOH HOH . F 4 HOH A 4 404 4 HOH HOH . F 4 HOH A 5 405 5 HOH HOH . F 4 HOH A 6 406 6 HOH HOH . F 4 HOH A 7 407 7 HOH HOH . F 4 HOH A 8 408 8 HOH HOH . F 4 HOH A 9 409 9 HOH HOH . F 4 HOH A 10 410 10 HOH HOH . F 4 HOH A 11 411 11 HOH HOH . F 4 HOH A 12 412 12 HOH HOH . F 4 HOH A 13 413 13 HOH HOH . F 4 HOH A 14 414 14 HOH HOH . F 4 HOH A 15 415 15 HOH HOH . F 4 HOH A 16 416 16 HOH HOH . F 4 HOH A 17 417 17 HOH HOH . F 4 HOH A 18 418 18 HOH HOH . F 4 HOH A 19 419 19 HOH HOH . F 4 HOH A 20 420 20 HOH HOH . F 4 HOH A 21 421 21 HOH HOH . F 4 HOH A 22 422 22 HOH HOH . F 4 HOH A 23 423 23 HOH HOH . F 4 HOH A 24 424 24 HOH HOH . F 4 HOH A 25 425 25 HOH HOH . F 4 HOH A 26 426 26 HOH HOH . F 4 HOH A 27 427 27 HOH HOH . F 4 HOH A 28 428 28 HOH HOH . F 4 HOH A 29 429 29 HOH HOH . F 4 HOH A 30 430 30 HOH HOH . F 4 HOH A 31 431 31 HOH HOH . F 4 HOH A 32 432 32 HOH HOH . F 4 HOH A 33 433 33 HOH HOH . F 4 HOH A 34 434 34 HOH HOH . F 4 HOH A 35 435 35 HOH HOH . F 4 HOH A 36 436 36 HOH HOH . F 4 HOH A 37 437 37 HOH HOH . F 4 HOH A 38 438 38 HOH HOH . F 4 HOH A 39 439 39 HOH HOH . F 4 HOH A 40 440 40 HOH HOH . F 4 HOH A 41 441 41 HOH HOH . F 4 HOH A 42 442 42 HOH HOH . F 4 HOH A 43 443 43 HOH HOH . F 4 HOH A 44 444 44 HOH HOH . F 4 HOH A 45 445 45 HOH HOH . F 4 HOH A 46 446 46 HOH HOH . F 4 HOH A 47 447 47 HOH HOH . F 4 HOH A 48 448 48 HOH HOH . F 4 HOH A 49 449 49 HOH HOH . F 4 HOH A 50 450 50 HOH HOH . F 4 HOH A 51 451 51 HOH HOH . F 4 HOH A 52 452 52 HOH HOH . F 4 HOH A 53 453 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LF8 . . . B 2 48.231 -15.4 28.077 1 41.85 ? N1 LF8 301 A 1 HETATM 2 C C2 LF8 . . . B 2 47.389 -16.458 28.164 1 45.18 ? C2 LF8 301 A 1 HETATM 3 C C3 LF8 . . . B 2 46.004 -16.292 28.413 1 40.75 ? C3 LF8 301 A 1 HETATM 4 C C4 LF8 . . . B 2 45.548 -14.972 28.538 1 35.53 ? C4 LF8 301 A 1 HETATM 5 C C5 LF8 . . . B 2 46.448 -13.887 28.412 1 34.46 ? C5 LF8 301 A 1 HETATM 6 C C6 LF8 . . . B 2 47.824 -14.132 28.166 1 40.23 ? C6 LF8 301 A 1 HETATM 7 C C7 LF8 . . . B 2 44.123 -14.739 28.748 1 37.78 ? C7 LF8 301 A 1 HETATM 8 C C8 LF8 . . . B 2 43.701 -14.4 30.036 1 41.09 ? C8 LF8 301 A 1 HETATM 9 C C9 LF8 . . . B 2 42.362 -14.16 30.271 1 40.47 ? C9 LF8 301 A 1 HETATM 10 C C10 LF8 . . . B 2 41.486 -14.276 29.191 1 41.01 ? C10 LF8 301 A 1 HETATM 11 C C11 LF8 . . . B 2 41.882 -14.564 27.896 1 36.73 ? C11 LF8 301 A 1 HETATM 12 C C12 LF8 . . . B 2 43.242 -14.844 27.668 1 37.89 ? C12 LF8 301 A 1 HETATM 13 CL CL LF8 . . . B 2 39.792 -13.933 29.582 1 43.25 ? CL LF8 301 A 1 HETATM 14 C C14 LF8 . . . B 2 45.038 -17.476 28.518 1 33.28 ? C14 LF8 301 A 1 HETATM 15 C C15 LF8 . . . B 2 48.977 -13.131 28.078 1 38.99 ? C15 LF8 301 A 1 HETATM 16 C C16 LF8 . . . B 2 48.062 -17.799 28.012 1 50.74 ? C16 LF8 301 A 1 HETATM 17 C C17 LF8 . . . B 2 48.177 -18.473 26.802 1 56.05 ? C17 LF8 301 A 1 HETATM 18 C C18 LF8 . . . B 2 48.837 -19.729 26.775 1 60.3 ? C18 LF8 301 A 1 HETATM 19 C C19 LF8 . . . B 2 49.399 -20.272 27.945 1 69.61 ? C19 LF8 301 A 1 HETATM 20 C C20 LF8 . . . B 2 49.308 -19.565 29.15 1 70.83 ? C20 LF8 301 A 1 HETATM 21 C C21 LF8 . . . B 2 48.64 -18.333 29.149 1 58.25 ? C21 LF8 301 A 1 HETATM 22 C C22 LF8 . . . B 2 50.106 -21.616 27.908 1 68.42 ? C22 LF8 301 A 1 HETATM 23 C C23 LF8 . . . B 2 49.893 -20.089 30.457 1 71.97 ? C23 LF8 301 A 1 HETATM 24 C C24 LF8 . . . B 2 45.911 -12.508 28.617 1 37.22 ? C24 LF8 301 A 1 HETATM 25 C C25 LF8 . . . B 2 46.408 -12.092 29.989 1 40.56 ? C25 LF8 301 A 1 HETATM 26 O O26 LF8 . . . B 2 46.416 -11.584 27.677 1 35.76 ? O26 LF8 301 A 1 HETATM 27 C C27 LF8 . . . B 2 45.806 -11.418 26.388 1 36.89 ? C27 LF8 301 A 1 HETATM 28 C C28 LF8 . . . B 2 46.016 -12.614 25.507 1 32.73 ? C28 LF8 301 A 1 HETATM 29 C C29 LF8 . . . B 2 46.528 -10.223 25.718 1 32.79 ? C29 LF8 301 A 1 HETATM 30 C C30 LF8 . . . B 2 44.324 -11.174 26.617 1 35.23 ? C30 LF8 301 A 1 HETATM 31 O O33 LF8 . . . B 2 46.655 -10.898 30.186 1 40.04 ? O33 LF8 301 A 1 HETATM 32 O O34 LF8 . . . B 2 46.586 -12.929 30.903 1 37.39 ? O34 LF8 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #